RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
GHDC-209ENST00000588762 FLAD1Q8NFF5 587 aa20.15■□□□□ 0.82
GHDC-209ENST00000588762 ZNF521Q96K83 1311 aa20.14■□□□□ 0.81
GHDC-209ENST00000588762 INTS5Q6P9B9 1019 aaKnown RBP20.14■□□□□ 0.81
GHDC-209ENST00000588762 RTCBQ9Y3I0 505 aaKnown RBP20.14■□□□□ 0.81
GHDC-209ENST00000588762 USP16Q9Y5T5 823 aa20.14■□□□□ 0.81
GHDC-209ENST00000588762 PRAMEF22A3QJZ6 481 aa20.13■□□□□ 0.81
GHDC-209ENST00000588762 RPS6KA4O75676 772 aa20.13■□□□□ 0.81
GHDC-209ENST00000588762 SSFA2P28290 1259 aa20.13■□□□□ 0.81
GHDC-209ENST00000588762 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
GHDC-209ENST00000588762 MYH16Q9H6N6 1097 aa20.13■□□□□ 0.81
GHDC-209ENST00000588762 PNPLA7Q6ZV29 1317 aa20.12■□□□□ 0.81
GHDC-209ENST00000588762 MSH5O43196 834 aa20.12■□□□□ 0.81
GHDC-209ENST00000588762 PHF14O94880 888 aa20.12■□□□□ 0.81
GHDC-209ENST00000588762 GOLGA2Q08379 1002 aa20.12■□□□□ 0.81
GHDC-209ENST00000588762 CASZ1Q86V15 1759 aa20.12■□□□□ 0.81
GHDC-209ENST00000588762 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.11■□□□□ 0.81
GHDC-209ENST00000588762 CANXP27824 592 aaKnown RBP20.11■□□□□ 0.81
GHDC-209ENST00000588762 A1BGP04217 495 aa20.1■□□□□ 0.81
GHDC-209ENST00000588762 HOXB7P09629 217 aa20.1■□□□□ 0.81
GHDC-209ENST00000588762 ADRA2BP18089 450 aa20.1■□□□□ 0.81
GHDC-209ENST00000588762 KRT24Q2M2I5 525 aa20.1■□□□□ 0.81
GHDC-209ENST00000588762 TRAPPC3LQ5T215 181 aa20.1■□□□□ 0.81
GHDC-209ENST00000588762 ZBTB1Q9Y2K1 713 aa20.1■□□□□ 0.81
GHDC-209ENST00000588762 FANCIQ9NVI1 1328 aa20.09■□□□□ 0.81
GHDC-209ENST00000588762 DUSP27Q5VZP5 1158 aa20.09■□□□□ 0.81
GHDC-209ENST00000588762 NPM2Q86SE8 214 aaKnown RBP20.09■□□□□ 0.81
GHDC-209ENST00000588762 C4AP0C0L4 1744 aa20.09■□□□□ 0.81
GHDC-209ENST00000588762 E9PSI1 815 aa20.08■□□□□ 0.81
GHDC-209ENST00000588762 EIF2S2P20042 333 aaKnown RBP20.08■□□□□ 0.81
GHDC-209ENST00000588762 SMIM5Q71RC9 77 aa20.08■□□□□ 0.81
GHDC-209ENST00000588762 AMIGO3Q86WK7 504 aa20.08■□□□□ 0.81
GHDC-209ENST00000588762 COL23A1Q86Y22 540 aaPredicted RBP20.08■□□□□ 0.81
GHDC-209ENST00000588762 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.81
GHDC-209ENST00000588762 SOS1Q07889 1333 aaPredicted RBP20.07■□□□□ 0.8
GHDC-209ENST00000588762 ELL2O00472 640 aaPredicted RBP20.07■□□□□ 0.8
GHDC-209ENST00000588762 RFC4P35249 363 aa20.07■□□□□ 0.8
GHDC-209ENST00000588762 IL6STP40189 918 aaPredicted RBP20.07■□□□□ 0.8
GHDC-209ENST00000588762 C8orf58Q8NAV2 365 aa20.07■□□□□ 0.8
GHDC-209ENST00000588762 SLC16A10Q8TF71 515 aa20.07■□□□□ 0.8
GHDC-209ENST00000588762 CHMP4AQ9BY43 222 aa20.07■□□□□ 0.8
GHDC-209ENST00000588762 PDGFDQ9GZP0 370 aaPredicted RBP20.07■□□□□ 0.8
GHDC-209ENST00000588762 ZNF330Q9Y3S2 320 aaPredicted RBP20.07■□□□□ 0.8
GHDC-209ENST00000588762 ERBB4Q15303 1308 aa20.06■□□□□ 0.8
GHDC-209ENST00000588762 ARHGEF1Q92888 912 aaKnown RBP20.06■□□□□ 0.8
GHDC-209ENST00000588762 COL15A1P39059 1388 aa20.06■□□□□ 0.8
GHDC-209ENST00000588762 A0A087WZG4 1122 aa20.05■□□□□ 0.8
GHDC-209ENST00000588762 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
GHDC-209ENST00000588762 EIF5P55010 431 aaKnown RBP20.05■□□□□ 0.8
GHDC-209ENST00000588762 SLFN5Q08AF3 891 aa20.05■□□□□ 0.8
GHDC-209ENST00000588762 HDGFL1Q5TGJ6 251 aa20.05■□□□□ 0.8
GHDC-209ENST00000588762 NECTIN2Q92692 538 aa20.05■□□□□ 0.8
GHDC-209ENST00000588762 NBPF26B4DH59 902 aa20.03■□□□□ 0.8
GHDC-209ENST00000588762 ZPR1O75312 459 aa20.03■□□□□ 0.8
GHDC-209ENST00000588762 ZBTB7AO95365 584 aa20.03■□□□□ 0.8
GHDC-209ENST00000588762 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
GHDC-209ENST00000588762 TWISTNBQ3B726 338 aaPredicted RBP20.03■□□□□ 0.8
GHDC-209ENST00000588762 NBPF10Q6P3W6 841 aaKnown RBP20.03■□□□□ 0.8
GHDC-209ENST00000588762 NBPF15Q8N660 670 aa20.03■□□□□ 0.8
GHDC-209ENST00000588762 CDCA7LQ96GN5 454 aa20.03■□□□□ 0.8
GHDC-209ENST00000588762 ARXQ96QS3 562 aa20.03■□□□□ 0.8
GHDC-209ENST00000588762 MTFR1LQ9H019 292 aa20.03■□□□□ 0.8
GHDC-209ENST00000588762 ZBED9Q6R2W3 1325 aa20.02■□□□□ 0.8
GHDC-209ENST00000588762 MYL6BP14649 208 aa20.02■□□□□ 0.8
GHDC-209ENST00000588762 TSPYL6Q8N831 410 aa20.02■□□□□ 0.8
GHDC-209ENST00000588762 CACNA1FO60840 1977 aa20.02■□□□□ 0.8
GHDC-209ENST00000588762 CCDC30Q5VVM6 783 aa20.01■□□□□ 0.79
GHDC-209ENST00000588762 DBF4Q9UBU7 674 aaPredicted RBP20.01■□□□□ 0.79
GHDC-209ENST00000588762 SPON1Q9HCB6 807 aa20■□□□□ 0.79
GHDC-209ENST00000588762 DDX21Q9NR30 783 aaKnown RBP eCLIP20■□□□□ 0.79
GHDC-209ENST00000588762 CHPF2Q9P2E5 772 aa20■□□□□ 0.79
GHDC-209ENST00000588762 NARFQ9UHQ1 456 aa20■□□□□ 0.79
GHDC-209ENST00000588762 ATF5Q9Y2D1 282 aaPredicted RBP20■□□□□ 0.79
GHDC-209ENST00000588762 USP42Q9H9J4 1324 aaKnown RBP20■□□□□ 0.79
GHDC-209ENST00000588762 PDIA6Q15084 440 aa19.99■□□□□ 0.79
GHDC-209ENST00000588762 DZIP3Q86Y13 1208 aaKnown RBP19.99■□□□□ 0.79
GHDC-209ENST00000588762 SRP68Q9UHB9 627 aaKnown RBP19.99■□□□□ 0.79
GHDC-209ENST00000588762 TBC1D2BQ9UPU7 963 aa19.99■□□□□ 0.79
GHDC-209ENST00000588762 COL24A1Q17RW2 1714 aa19.99■□□□□ 0.79
GHDC-209ENST00000588762 BCORQ6W2J9 1755 aa19.98■□□□□ 0.79
GHDC-209ENST00000588762 SCN7AQ01118 1682 aa19.98■□□□□ 0.79
GHDC-209ENST00000588762 MSL1Q68DK7 614 aa19.98■□□□□ 0.79
GHDC-209ENST00000588762 TRMT2AQ8IZ69 625 aaKnown RBP19.98■□□□□ 0.79
GHDC-209ENST00000588762 NLGN1Q8N2Q7 840 aa19.98■□□□□ 0.79
GHDC-209ENST00000588762 STK31Q9BXU1 1019 aa19.98■□□□□ 0.79
GHDC-209ENST00000588762 HYPKQ9NX55 129 aa19.98■□□□□ 0.79
GHDC-209ENST00000588762 ANXA1P04083 346 aa19.97■□□□□ 0.79
GHDC-209ENST00000588762 GYS1P13807 737 aa19.97■□□□□ 0.79
GHDC-209ENST00000588762 USPL1Q5W0Q7 1092 aa19.97■□□□□ 0.79
GHDC-209ENST00000588762 VAMP4O75379 141 aa19.96■□□□□ 0.79
GHDC-209ENST00000588762 PROSER3Q2NL68 480 aa19.96■□□□□ 0.79
GHDC-209ENST00000588762 KIF6Q6ZMV9 814 aa19.96■□□□□ 0.79
GHDC-209ENST00000588762 NUP98P52948 1817 aa19.95■□□□□ 0.78
GHDC-209ENST00000588762 POLD1P28340 1107 aa19.95■□□□□ 0.78
GHDC-209ENST00000588762 LRP5O75197 1615 aa19.94■□□□□ 0.78
GHDC-209ENST00000588762 AIMP1Q12904 312 aaKnown RBP19.94■□□□□ 0.78
GHDC-209ENST00000588762 ZNF652Q9Y2D9 606 aa19.94■□□□□ 0.78
GHDC-209ENST00000588762 CAMTA2O94983 1202 aa19.93■□□□□ 0.78
GHDC-209ENST00000588762 FKBP8Q14318 412 aa19.93■□□□□ 0.78
GHDC-209ENST00000588762 TTLL7Q6ZT98 887 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms