RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 CFAP44Q96MT7 982 aa27.98■■■□□ 2.07
RETREG3-204ENST00000586796 CICQ96RK0 1608 aaPredicted RBP27.97■■■□□ 2.07
RETREG3-204ENST00000586796 CANXP27824 592 aaKnown RBP27.97■■■□□ 2.07
RETREG3-204ENST00000586796 SSFA2P28290 1259 aa27.97■■■□□ 2.07
RETREG3-204ENST00000586796 ATF5Q9Y2D1 282 aaPredicted RBP27.97■■■□□ 2.07
RETREG3-204ENST00000586796 ZBTB1Q9Y2K1 713 aa27.97■■■□□ 2.07
RETREG3-204ENST00000586796 CASZ1Q86V15 1759 aa27.96■■■□□ 2.07
RETREG3-204ENST00000586796 TRAPPC3LQ5T215 181 aa27.96■■■□□ 2.07
RETREG3-204ENST00000586796 GIGYF1O75420 1035 aaPredicted RBP27.95■■■□□ 2.06
RETREG3-204ENST00000586796 GNAI1P63096 354 aa27.95■■■□□ 2.06
RETREG3-204ENST00000586796 MBIPQ9NS73 344 aa27.95■■■□□ 2.06
RETREG3-204ENST00000586796 IFT57Q9NWB7 429 aa27.95■■■□□ 2.06
RETREG3-204ENST00000586796 UBR3Q6ZT12 1888 aa27.94■■■□□ 2.06
RETREG3-204ENST00000586796 A1BGP04217 495 aa27.94■■■□□ 2.06
RETREG3-204ENST00000586796 NCBP3Q53F19 620 aaKnown RBP27.94■■■□□ 2.06
RETREG3-204ENST00000586796 QSER1Q2KHR3 1735 aa27.94■■■□□ 2.06
RETREG3-204ENST00000586796 ZNF853P0CG23 659 aa27.93■■■□□ 2.06
RETREG3-204ENST00000586796 ARHGEF1Q92888 912 aaKnown RBP27.93■■■□□ 2.06
RETREG3-204ENST00000586796 ZNF330Q9Y3S2 320 aaPredicted RBP27.93■■■□□ 2.06
RETREG3-204ENST00000586796 MYH14Q7Z406 1995 aaKnown RBP27.93■■■□□ 2.06
RETREG3-204ENST00000586796 PIP4K2AP48426 406 aaPredicted RBP27.92■■■□□ 2.06
RETREG3-204ENST00000586796 KRT24Q2M2I5 525 aa27.92■■■□□ 2.06
RETREG3-204ENST00000586796 MTFR1LQ9H019 292 aa27.92■■■□□ 2.06
RETREG3-204ENST00000586796 SPON1Q9HCB6 807 aa27.92■■■□□ 2.06
RETREG3-204ENST00000586796 MSL1Q68DK7 614 aa27.91■■■□□ 2.06
RETREG3-204ENST00000586796 SLC16A10Q8TF71 515 aa27.91■■■□□ 2.06
RETREG3-204ENST00000586796 RFC4P35249 363 aa27.9■■■□□ 2.06
RETREG3-204ENST00000586796 SOS1Q07889 1333 aaPredicted RBP27.9■■■□□ 2.06
RETREG3-204ENST00000586796 ADRA2BP18089 450 aa27.89■■■□□ 2.06
RETREG3-204ENST00000586796 NGEFQ8N5V2 710 aa27.89■■■□□ 2.06
RETREG3-204ENST00000586796 EIF2S2P20042 333 aaKnown RBP27.88■■■□□ 2.05
RETREG3-204ENST00000586796 WDR63Q8IWG1 891 aa27.88■■■□□ 2.05
RETREG3-204ENST00000586796 TSR2Q969E8 191 aaKnown RBP27.88■■■□□ 2.05
RETREG3-204ENST00000586796 ARXQ96QS3 562 aa27.87■■■□□ 2.05
RETREG3-204ENST00000586796 NECTIN2Q92692 538 aa27.86■■■□□ 2.05
RETREG3-204ENST00000586796 IL16Q14005 1332 aa27.86■■■□□ 2.05
RETREG3-204ENST00000586796 COL15A1P39059 1388 aa27.86■■■□□ 2.05
RETREG3-204ENST00000586796 NPM2Q86SE8 214 aaKnown RBP27.85■■■□□ 2.05
RETREG3-204ENST00000586796 SRP68Q9UHB9 627 aaKnown RBP27.85■■■□□ 2.05
RETREG3-204ENST00000586796 ELL2O00472 640 aaPredicted RBP27.84■■■□□ 2.05
RETREG3-204ENST00000586796 IL6STP40189 918 aaPredicted RBP27.84■■■□□ 2.05
RETREG3-204ENST00000586796 EIF5P55010 431 aaKnown RBP27.84■■■□□ 2.05
RETREG3-204ENST00000586796 NBPF26B4DH59 902 aa27.83■■■□□ 2.05
RETREG3-204ENST00000586796 DUSP27Q5VZP5 1158 aa27.83■■■□□ 2.05
RETREG3-204ENST00000586796 NBPF10Q6P3W6 841 aaKnown RBP27.83■■■□□ 2.05
RETREG3-204ENST00000586796 NBPF15Q8N660 670 aa27.83■■■□□ 2.05
RETREG3-204ENST00000586796 ZPR1O75312 459 aa27.82■■■□□ 2.04
RETREG3-204ENST00000586796 PTGER2P43116 358 aa27.82■■■□□ 2.04
RETREG3-204ENST00000586796 LAMB4A4D0S4 1761 aa27.81■■■□□ 2.04
RETREG3-204ENST00000586796 MYL6BP14649 208 aa27.81■■■□□ 2.04
RETREG3-204ENST00000586796 POLD1P28340 1107 aa27.81■■■□□ 2.04
RETREG3-204ENST00000586796 SPINK5Q9NQ38 1064 aaPredicted RBP27.81■■■□□ 2.04
RETREG3-204ENST00000586796 PPP1R1BQ9UD71 204 aaPredicted RBP27.81■■■□□ 2.04
RETREG3-204ENST00000586796 TBC1D2BQ9UPU7 963 aa27.81■■■□□ 2.04
RETREG3-204ENST00000586796 A0A087WZG4 1122 aa27.8■■■□□ 2.04
RETREG3-204ENST00000586796 USPL1Q5W0Q7 1092 aa27.8■■■□□ 2.04
RETREG3-204ENST00000586796 C8orf58Q8NAV2 365 aa27.8■■■□□ 2.04
RETREG3-204ENST00000586796 USP42Q9H9J4 1324 aaKnown RBP27.8■■■□□ 2.04
RETREG3-204ENST00000586796 ZNF521Q96K83 1311 aa27.79■■■□□ 2.04
RETREG3-204ENST00000586796 FANCIQ9NVI1 1328 aa27.79■■■□□ 2.04
RETREG3-204ENST00000586796 GYS1P13807 737 aa27.79■■■□□ 2.04
RETREG3-204ENST00000586796 C4AP0C0L4 1744 aa27.78■■■□□ 2.04
RETREG3-204ENST00000586796 HDGFL1Q5TGJ6 251 aa27.78■■■□□ 2.04
RETREG3-204ENST00000586796 NARFQ9UHQ1 456 aa27.78■■■□□ 2.04
RETREG3-204ENST00000586796 LRP5O75197 1615 aa27.78■■■□□ 2.04
RETREG3-204ENST00000586796 SGIP1Q9BQI5 828 aa27.77■■■□□ 2.04
RETREG3-204ENST00000586796 ANXA1P04083 346 aa27.76■■■□□ 2.03
RETREG3-204ENST00000586796 GOLGA2Q08379 1002 aa27.76■■■□□ 2.03
RETREG3-204ENST00000586796 DZIP3Q86Y13 1208 aaKnown RBP27.76■■■□□ 2.03
RETREG3-204ENST00000586796 NLGN1Q8N2Q7 840 aa27.76■■■□□ 2.03
RETREG3-204ENST00000586796 TSPYL6Q8N831 410 aa27.76■■■□□ 2.03
RETREG3-204ENST00000586796 MYH16Q9H6N6 1097 aa27.76■■■□□ 2.03
RETREG3-204ENST00000586796 HOXB7P09629 217 aa27.75■■■□□ 2.03
RETREG3-204ENST00000586796 FKBP8Q14318 412 aa27.75■■■□□ 2.03
RETREG3-204ENST00000586796 HNRNPUQ00839 825 aaKnown RBP eCLIP27.74■■■□□ 2.03
RETREG3-204ENST00000586796 PROSER3Q2NL68 480 aa27.74■■■□□ 2.03
RETREG3-204ENST00000586796 ERBB4Q15303 1308 aa27.73■■■□□ 2.03
RETREG3-204ENST00000586796 MMP10P09238 476 aa27.73■■■□□ 2.03
RETREG3-204ENST00000586796 EXOSC9Q06265 439 aaKnown RBP27.72■■■□□ 2.03
RETREG3-204ENST00000586796 PDIA6Q15084 440 aa27.72■■■□□ 2.03
RETREG3-204ENST00000586796 KLHL34Q8N239 644 aa27.72■■■□□ 2.03
RETREG3-204ENST00000586796 BCL2L12Q9HB09 334 aa27.72■■■□□ 2.03
RETREG3-204ENST00000586796 CHPF2Q9P2E5 772 aa27.72■■■□□ 2.03
RETREG3-204ENST00000586796 TWISTNBQ3B726 338 aaPredicted RBP27.71■■■□□ 2.03
RETREG3-204ENST00000586796 CAMTA2O94983 1202 aa27.7■■■□□ 2.02
RETREG3-204ENST00000586796 BICDL1Q6ZP65 573 aa27.7■■■□□ 2.02
RETREG3-204ENST00000586796 CDCA7LQ96GN5 454 aa27.7■■■□□ 2.02
RETREG3-204ENST00000586796 TTLL7Q6ZT98 887 aa27.69■■■□□ 2.02
RETREG3-204ENST00000586796 DDX21Q9NR30 783 aaKnown RBP eCLIP27.69■■■□□ 2.02
RETREG3-204ENST00000586796 E9PSI1 815 aa27.68■■■□□ 2.02
RETREG3-204ENST00000586796 TCERG1O14776 1098 aaKnown RBP27.68■■■□□ 2.02
RETREG3-204ENST00000586796 AIMP1Q12904 312 aaKnown RBP27.68■■■□□ 2.02
RETREG3-204ENST00000586796 KIF6Q6ZMV9 814 aa27.68■■■□□ 2.02
RETREG3-204ENST00000586796 DBF4Q9UBU7 674 aaPredicted RBP27.68■■■□□ 2.02
RETREG3-204ENST00000586796 COL24A1Q17RW2 1714 aa27.67■■■□□ 2.02
RETREG3-204ENST00000586796 PARP3Q9Y6F1 533 aa27.67■■■□□ 2.02
RETREG3-204ENST00000586796 SLFN5Q08AF3 891 aa27.66■■■□□ 2.02
RETREG3-204ENST00000586796 NFIXQ14938 502 aa27.66■■■□□ 2.02
RETREG3-204ENST00000586796 CCDC30Q5VVM6 783 aa27.66■■■□□ 2.02
RETREG3-204ENST00000586796 LRP10Q7Z4F1 713 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms