RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SSFA2P28290 1259 aa24.86■■□□□ 1.57
DDX39A-204ENST00000586558 QSER1Q2KHR3 1735 aa24.86■■□□□ 1.57
DDX39A-204ENST00000586558 LAMB4A4D0S4 1761 aa24.85■■□□□ 1.57
DDX39A-204ENST00000586558 RPS6KA4O75676 772 aa24.85■■□□□ 1.57
DDX39A-204ENST00000586558 INTS5Q6P9B9 1019 aaKnown RBP24.85■■□□□ 1.57
DDX39A-204ENST00000586558 RTCBQ9Y3I0 505 aaKnown RBP24.85■■□□□ 1.57
DDX39A-204ENST00000586558 USP16Q9Y5T5 823 aa24.85■■□□□ 1.57
DDX39A-204ENST00000586558 SOS1Q07889 1333 aaPredicted RBP24.85■■□□□ 1.57
DDX39A-204ENST00000586558 FANCIQ9NVI1 1328 aa24.85■■□□□ 1.57
DDX39A-204ENST00000586558 PRAMEF22A3QJZ6 481 aa24.84■■□□□ 1.57
DDX39A-204ENST00000586558 E9PSI1 815 aa24.84■■□□□ 1.57
DDX39A-204ENST00000586558 ADRA2BP18089 450 aa24.84■■□□□ 1.57
DDX39A-204ENST00000586558 TSR2Q969E8 191 aaKnown RBP24.84■■□□□ 1.57
DDX39A-204ENST00000586558 PNPLA7Q6ZV29 1317 aa24.83■■□□□ 1.56
DDX39A-204ENST00000586558 PSDA5PKW4 1024 aaPredicted RBP24.82■■□□□ 1.56
DDX39A-204ENST00000586558 UBR3Q6ZT12 1888 aa24.82■■□□□ 1.56
DDX39A-204ENST00000586558 ZBTB1Q9Y2K1 713 aa24.82■■□□□ 1.56
DDX39A-204ENST00000586558 ERBB4Q15303 1308 aa24.82■■□□□ 1.56
DDX39A-204ENST00000586558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.81■■□□□ 1.56
DDX39A-204ENST00000586558 KRT24Q2M2I5 525 aa24.81■■□□□ 1.56
DDX39A-204ENST00000586558 CHMP4AQ9BY43 222 aa24.81■■□□□ 1.56
DDX39A-204ENST00000586558 SPINK5Q9NQ38 1064 aaPredicted RBP24.81■■□□□ 1.56
DDX39A-204ENST00000586558 MYH14Q7Z406 1995 aaKnown RBP24.8■■□□□ 1.56
DDX39A-204ENST00000586558 TUBGCP6Q96RT7 1819 aa24.8■■□□□ 1.56
DDX39A-204ENST00000586558 DUSP27Q5VZP5 1158 aa24.8■■□□□ 1.56
DDX39A-204ENST00000586558 A1BGP04217 495 aa24.79■■□□□ 1.56
DDX39A-204ENST00000586558 SLFN5Q08AF3 891 aa24.79■■□□□ 1.56
DDX39A-204ENST00000586558 ZBED9Q6R2W3 1325 aa24.79■■□□□ 1.56
DDX39A-204ENST00000586558 PHF14O94880 888 aa24.78■■□□□ 1.56
DDX39A-204ENST00000586558 CANXP27824 592 aaKnown RBP24.78■■□□□ 1.56
DDX39A-204ENST00000586558 IL6STP40189 918 aaPredicted RBP24.78■■□□□ 1.56
DDX39A-204ENST00000586558 TRAPPC3LQ5T215 181 aa24.78■■□□□ 1.56
DDX39A-204ENST00000586558 AMIGO3Q86WK7 504 aa24.78■■□□□ 1.56
DDX39A-204ENST00000586558 C8orf58Q8NAV2 365 aa24.78■■□□□ 1.56
DDX39A-204ENST00000586558 CASZ1Q86V15 1759 aa24.77■■□□□ 1.56
DDX39A-204ENST00000586558 COL23A1Q86Y22 540 aaPredicted RBP24.77■■□□□ 1.56
DDX39A-204ENST00000586558 SLC16A10Q8TF71 515 aa24.77■■□□□ 1.56
DDX39A-204ENST00000586558 COL15A1P39059 1388 aa24.77■■□□□ 1.56
DDX39A-204ENST00000586558 EIF2S2P20042 333 aaKnown RBP24.76■■□□□ 1.55
DDX39A-204ENST00000586558 EIF5P55010 431 aaKnown RBP24.76■■□□□ 1.55
DDX39A-204ENST00000586558 HDGFL1Q5TGJ6 251 aa24.76■■□□□ 1.55
DDX39A-204ENST00000586558 A0A087WZG4 1122 aa24.75■■□□□ 1.55
DDX39A-204ENST00000586558 NPM2Q86SE8 214 aaKnown RBP24.75■■□□□ 1.55
DDX39A-204ENST00000586558 NBPF26B4DH59 902 aa24.74■■□□□ 1.55
DDX39A-204ENST00000586558 MSH5O43196 834 aa24.74■■□□□ 1.55
DDX39A-204ENST00000586558 TWISTNBQ3B726 338 aaPredicted RBP24.74■■□□□ 1.55
DDX39A-204ENST00000586558 NBPF10Q6P3W6 841 aaKnown RBP24.74■■□□□ 1.55
DDX39A-204ENST00000586558 TRMT2AQ8IZ69 625 aaKnown RBP24.74■■□□□ 1.55
DDX39A-204ENST00000586558 NBPF15Q8N660 670 aa24.74■■□□□ 1.55
DDX39A-204ENST00000586558 ARHGEF1Q92888 912 aaKnown RBP24.74■■□□□ 1.55
DDX39A-204ENST00000586558 ELL2O00472 640 aaPredicted RBP24.73■■□□□ 1.55
DDX39A-204ENST00000586558 RFC4P35249 363 aa24.73■■□□□ 1.55
DDX39A-204ENST00000586558 EXOSC9Q06265 439 aaKnown RBP24.73■■□□□ 1.55
DDX39A-204ENST00000586558 TSPYL6Q8N831 410 aa24.73■■□□□ 1.55
DDX39A-204ENST00000586558 CDCA7LQ96GN5 454 aa24.73■■□□□ 1.55
DDX39A-204ENST00000586558 SMIM5Q71RC9 77 aa24.72■■□□□ 1.55
DDX39A-204ENST00000586558 PDGFDQ9GZP0 370 aaPredicted RBP24.72■■□□□ 1.55
DDX39A-204ENST00000586558 CCDC30Q5VVM6 783 aa24.71■■□□□ 1.55
DDX39A-204ENST00000586558 MTFR1LQ9H019 292 aa24.71■■□□□ 1.55
DDX39A-204ENST00000586558 DDX21Q9NR30 783 aaKnown RBP eCLIP24.71■■□□□ 1.55
DDX39A-204ENST00000586558 DBF4Q9UBU7 674 aaPredicted RBP24.71■■□□□ 1.55
DDX39A-204ENST00000586558 USP42Q9H9J4 1324 aaKnown RBP24.7■■□□□ 1.54
DDX39A-204ENST00000586558 PIP4K2AP48426 406 aaPredicted RBP24.7■■□□□ 1.54
DDX39A-204ENST00000586558 PDIA6Q15084 440 aa24.7■■□□□ 1.54
DDX39A-204ENST00000586558 ZNF330Q9Y3S2 320 aaPredicted RBP24.7■■□□□ 1.54
DDX39A-204ENST00000586558 C4AP0C0L4 1744 aa24.69■■□□□ 1.54
DDX39A-204ENST00000586558 NECTIN2Q92692 538 aa24.69■■□□□ 1.54
DDX39A-204ENST00000586558 NARFQ9UHQ1 456 aa24.69■■□□□ 1.54
DDX39A-204ENST00000586558 ZPR1O75312 459 aa24.68■■□□□ 1.54
DDX39A-204ENST00000586558 CHPF2Q9P2E5 772 aa24.68■■□□□ 1.54
DDX39A-204ENST00000586558 VAMP4O75379 141 aa24.67■■□□□ 1.54
DDX39A-204ENST00000586558 MYL6BP14649 208 aa24.67■■□□□ 1.54
DDX39A-204ENST00000586558 HYPKQ9NX55 129 aa24.67■■□□□ 1.54
DDX39A-204ENST00000586558 RGL2O15211 777 aa24.66■■□□□ 1.54
DDX39A-204ENST00000586558 ZBTB7AO95365 584 aa24.66■■□□□ 1.54
DDX39A-204ENST00000586558 LRP10Q7Z4F1 713 aa24.66■■□□□ 1.54
DDX39A-204ENST00000586558 DZIP3Q86Y13 1208 aaKnown RBP24.66■■□□□ 1.54
DDX39A-204ENST00000586558 STK31Q9BXU1 1019 aa24.66■■□□□ 1.54
DDX39A-204ENST00000586558 CT47B1P0C2W7 299 aaPredicted RBP24.65■■□□□ 1.54
DDX39A-204ENST00000586558 PROSER3Q2NL68 480 aa24.65■■□□□ 1.54
DDX39A-204ENST00000586558 NLGN1Q8N2Q7 840 aa24.65■■□□□ 1.54
DDX39A-204ENST00000586558 SPON1Q9HCB6 807 aa24.65■■□□□ 1.54
DDX39A-204ENST00000586558 SRP68Q9UHB9 627 aaKnown RBP24.65■■□□□ 1.54
DDX39A-204ENST00000586558 GYS1P13807 737 aa24.64■■□□□ 1.54
DDX39A-204ENST00000586558 ZNF428Q96B54 188 aa24.64■■□□□ 1.54
DDX39A-204ENST00000586558 TBC1D2BQ9UPU7 963 aa24.64■■□□□ 1.54
DDX39A-204ENST00000586558 SCN7AQ01118 1682 aa24.63■■□□□ 1.53
DDX39A-204ENST00000586558 USPL1Q5W0Q7 1092 aa24.63■■□□□ 1.53
DDX39A-204ENST00000586558 ARXQ96QS3 562 aa24.63■■□□□ 1.53
DDX39A-204ENST00000586558 CAMTA2O94983 1202 aa24.62■■□□□ 1.53
DDX39A-204ENST00000586558 ANXA1P04083 346 aa24.62■■□□□ 1.53
DDX39A-204ENST00000586558 KIF6Q6ZMV9 814 aa24.62■■□□□ 1.53
DDX39A-204ENST00000586558 ERVV-1B6SEH8 477 aa24.61■■□□□ 1.53
DDX39A-204ENST00000586558 ATF5Q9Y2D1 282 aaPredicted RBP24.61■■□□□ 1.53
DDX39A-204ENST00000586558 ZNF652Q9Y2D9 606 aa24.61■■□□□ 1.53
DDX39A-204ENST00000586558 COL24A1Q17RW2 1714 aa24.61■■□□□ 1.53
DDX39A-204ENST00000586558 MSL1Q68DK7 614 aa24.6■■□□□ 1.53
DDX39A-204ENST00000586558 CLEC4GQ6UXB4 293 aa24.6■■□□□ 1.53
DDX39A-204ENST00000586558 MAP3K15Q6ZN16 1313 aa24.6■■□□□ 1.53
DDX39A-204ENST00000586558 POLD1P28340 1107 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms