RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	CYP19A1	P11511	503 aa	Predicted RBP	12.94	□□□□□ -0.34
EIF4A1-231	ENST00000584054	EXOSC9	Q06265	439 aa	Known RBP	12.94	□□□□□ -0.34
EIF4A1-231	ENST00000584054	KRT24	Q2M2I5	525 aa		12.94	□□□□□ -0.34
EIF4A1-231	ENST00000584054	LRP10	Q7Z4F1	713 aa		12.94	□□□□□ -0.34
EIF4A1-231	ENST00000584054	TSPYL6	Q8N831	410 aa		12.94	□□□□□ -0.34
EIF4A1-231	ENST00000584054	ZNF428	Q96B54	188 aa		12.94	□□□□□ -0.34
EIF4A1-231	ENST00000584054	USP16	Q9Y5T5	823 aa		12.94	□□□□□ -0.34
EIF4A1-231	ENST00000584054	ERBB4	Q15303	1308 aa		12.93	□□□□□ -0.34
EIF4A1-231	ENST00000584054	CNTNAP4	Q9C0A0	1308 aa		12.93	□□□□□ -0.34
EIF4A1-231	ENST00000584054	PRAMEF22	A3QJZ6	481 aa		12.93	□□□□□ -0.34
EIF4A1-231	ENST00000584054	PTCD1	O75127	700 aa	Known RBP	12.93	□□□□□ -0.34
EIF4A1-231	ENST00000584054	BAG6	P46379	1132 aa		12.93	□□□□□ -0.34
EIF4A1-231	ENST00000584054	BRPF1	P55201	1214 aa	Predicted RBP	12.93	□□□□□ -0.34
EIF4A1-231	ENST00000584054	PDIA6	Q15084	440 aa		12.93	□□□□□ -0.34
EIF4A1-231	ENST00000584054	LAS1L	Q9Y4W2	734 aa	Known RBP	12.93	□□□□□ -0.34
EIF4A1-231	ENST00000584054	KAT6B	Q8WYB5	2073 aa		12.93	□□□□□ -0.34
EIF4A1-231	ENST00000584054	TAF1L	Q8IZX4	1826 aa		12.92	□□□□□ -0.34
EIF4A1-231	ENST00000584054	ATP6V1A	P38606	617 aa		12.92	□□□□□ -0.34
EIF4A1-231	ENST00000584054	EN1	Q05925	392 aa	Predicted RBP	12.92	□□□□□ -0.34
EIF4A1-231	ENST00000584054	EZH2	Q15910	746 aa	Known RBP	12.92	□□□□□ -0.34
EIF4A1-231	ENST00000584054	INTS5	Q6P9B9	1019 aa	Known RBP	12.92	□□□□□ -0.34
EIF4A1-231	ENST00000584054	DEFB132	Q7Z7B7	95 aa		12.92	□□□□□ -0.34
EIF4A1-231	ENST00000584054	DNAJC10	Q8IXB1	793 aa		12.92	□□□□□ -0.34
EIF4A1-231	ENST00000584054	LINC00116	Q8NCU8	138 aa		12.92	□□□□□ -0.34
EIF4A1-231	ENST00000584054	AKT1S1	Q96B36	256 aa		12.92	□□□□□ -0.34
EIF4A1-231	ENST00000584054	CCNL1	Q9UK58	526 aa	Predicted RBP	12.92	□□□□□ -0.34
EIF4A1-231	ENST00000584054	TWISTNB	Q3B726	338 aa	Predicted RBP	12.91	□□□□□ -0.34
EIF4A1-231	ENST00000584054	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.91	□□□□□ -0.34
EIF4A1-231	ENST00000584054	CHMP4A	Q9BY43	222 aa		12.91	□□□□□ -0.34
EIF4A1-231	ENST00000584054	LAMB4	A4D0S4	1761 aa		12.91	□□□□□ -0.34
EIF4A1-231	ENST00000584054	NBPF26	B4DH59	902 aa		12.9	□□□□□ -0.34
EIF4A1-231	ENST00000584054	SF3B2	Q13435	895 aa	Known RBP	12.9	□□□□□ -0.34
EIF4A1-231	ENST00000584054	NBPF14	Q5TI25	921 aa		12.9	□□□□□ -0.34
EIF4A1-231	ENST00000584054	NBPF10	Q6P3W6	841 aa	Known RBP	12.9	□□□□□ -0.34
EIF4A1-231	ENST00000584054	NBPF15	Q8N660	670 aa		12.9	□□□□□ -0.34
EIF4A1-231	ENST00000584054	RBM42	Q9BTD8	480 aa	Known RBP	12.9	□□□□□ -0.34
EIF4A1-231	ENST00000584054	MYH14	Q7Z406	1995 aa	Known RBP	12.89	□□□□□ -0.35
EIF4A1-231	ENST00000584054	C4B	P0C0L5	1744 aa		12.89	□□□□□ -0.35
EIF4A1-231	ENST00000584054	NUP188	Q5SRE5	1749 aa		12.89	□□□□□ -0.35
EIF4A1-231	ENST00000584054	STARD3NL	O95772	234 aa		12.89	□□□□□ -0.35
EIF4A1-231	ENST00000584054	EIF5	P55010	431 aa	Known RBP	12.89	□□□□□ -0.35
EIF4A1-231	ENST00000584054	RGL2	O15211	777 aa		12.88	□□□□□ -0.35
EIF4A1-231	ENST00000584054	RPS6KA4	O75676	772 aa		12.88	□□□□□ -0.35
EIF4A1-231	ENST00000584054	IL6ST	P40189	918 aa	Predicted RBP	12.88	□□□□□ -0.35
EIF4A1-231	ENST00000584054	CRKL	P46109	303 aa	Known RBP	12.88	□□□□□ -0.35
EIF4A1-231	ENST00000584054	ALDH1L2	Q3SY69	923 aa		12.88	□□□□□ -0.35
EIF4A1-231	ENST00000584054	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.88	□□□□□ -0.35	5e-7	■□□□□ 10.1
EIF4A1-231	ENST00000584054	A1BG	P04217	495 aa		12.87	□□□□□ -0.35
EIF4A1-231	ENST00000584054	KCNQ4	P56696	695 aa		12.87	□□□□□ -0.35
EIF4A1-231	ENST00000584054	CCDC87	Q9NVE4	849 aa		12.87	□□□□□ -0.35
EIF4A1-231	ENST00000584054	QSER1	Q2KHR3	1735 aa		12.86	□□□□□ -0.35
EIF4A1-231	ENST00000584054	RARS	P54136	660 aa	Known RBP	12.86	□□□□□ -0.35
EIF4A1-231	ENST00000584054	ZNF827	Q17R98	1081 aa		12.86	□□□□□ -0.35
EIF4A1-231	ENST00000584054	HDGFL1	Q5TGJ6	251 aa		12.86	□□□□□ -0.35
EIF4A1-231	ENST00000584054	CCDC30	Q5VVM6	783 aa		12.86	□□□□□ -0.35
EIF4A1-231	ENST00000584054	AMIGO3	Q86WK7	504 aa		12.86	□□□□□ -0.35
EIF4A1-231	ENST00000584054	DBF4	Q9UBU7	674 aa	Predicted RBP	12.86	□□□□□ -0.35
EIF4A1-231	ENST00000584054	ZBTB1	Q9Y2K1	713 aa		12.86	□□□□□ -0.35
EIF4A1-231	ENST00000584054	ELL2	O00472	640 aa	Predicted RBP	12.85	□□□□□ -0.35
EIF4A1-231	ENST00000584054	MRPL50	Q8N5N7	158 aa	Known RBP	12.85	□□□□□ -0.35
EIF4A1-231	ENST00000584054	YTHDC1	Q96MU7	727 aa	Known RBP	12.85	□□□□□ -0.35
EIF4A1-231	ENST00000584054	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.85	□□□□□ -0.35
EIF4A1-231	ENST00000584054	UBR3	Q6ZT12	1888 aa		12.85	□□□□□ -0.35
EIF4A1-231	ENST00000584054	CACNA1F	O60840	1977 aa		12.84	□□□□□ -0.35
EIF4A1-231	ENST00000584054	PRKCSH	P14314	528 aa	Predicted RBP	12.84	□□□□□ -0.35
EIF4A1-231	ENST00000584054	SSFA2	P28290	1259 aa		12.84	□□□□□ -0.35
EIF4A1-231	ENST00000584054	SLC15A2	Q16348	729 aa		12.84	□□□□□ -0.35
EIF4A1-231	ENST00000584054	PROSER3	Q2NL68	480 aa		12.84	□□□□□ -0.35
EIF4A1-231	ENST00000584054	SSH1	Q8WYL5	1049 aa		12.84	□□□□□ -0.35
EIF4A1-231	ENST00000584054	EIF2S2	P20042	333 aa	Known RBP	12.83	□□□□□ -0.36
EIF4A1-231	ENST00000584054	HYPK	Q9NX55	129 aa		12.83	□□□□□ -0.36
EIF4A1-231	ENST00000584054	CHPF2	Q9P2E5	772 aa		12.83	□□□□□ -0.36
EIF4A1-231	ENST00000584054	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.82	□□□□□ -0.36
EIF4A1-231	ENST00000584054	RNF123	Q5XPI4	1314 aa		12.82	□□□□□ -0.36
EIF4A1-231	ENST00000584054	ERVV-1	B6SEH8	477 aa		12.81	□□□□□ -0.36
EIF4A1-231	ENST00000584054	FLAD1	Q8NFF5	587 aa		12.81	□□□□□ -0.36
EIF4A1-231	ENST00000584054	ARHGAP45	Q92619	1136 aa		12.81	□□□□□ -0.36
EIF4A1-231	ENST00000584054	TAOK2	Q9UL54	1235 aa		12.81	□□□□□ -0.36
EIF4A1-231	ENST00000584054	RTCB	Q9Y3I0	505 aa	Known RBP	12.81	□□□□□ -0.36
EIF4A1-231	ENST00000584054	PNPLA7	Q6ZV29	1317 aa		12.81	□□□□□ -0.36
EIF4A1-231	ENST00000584054		A0A087WZG4	1122 aa		12.8	□□□□□ -0.36
EIF4A1-231	ENST00000584054	G2E3	Q7L622	706 aa		12.8	□□□□□ -0.36
EIF4A1-231	ENST00000584054	ARHGEF1	Q92888	912 aa	Known RBP	12.8	□□□□□ -0.36
EIF4A1-231	ENST00000584054	PHAX	Q9H814	394 aa	Known RBP	12.8	□□□□□ -0.36
EIF4A1-231	ENST00000584054	NARF	Q9UHQ1	456 aa		12.8	□□□□□ -0.36
EIF4A1-231	ENST00000584054	TUBGCP6	Q96RT7	1819 aa		12.8	□□□□□ -0.36
EIF4A1-231	ENST00000584054	COL15A1	P39059	1388 aa		12.8	□□□□□ -0.36
EIF4A1-231	ENST00000584054	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	GNPAT	O15228	680 aa		12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	CAMTA2	O94983	1202 aa		12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	ANXA1	P04083	346 aa		12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	CANX	P27824	592 aa	Known RBP	12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	TRAPPC3L	Q5T215	181 aa		12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	CLEC4G	Q6UXB4	293 aa		12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	COPS6	Q7L5N1	327 aa		12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	COL23A1	Q86Y22	540 aa	Predicted RBP	12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	AK7	Q96M32	723 aa		12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	STK31	Q9BXU1	1019 aa		12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	BCL2L12	Q9HB09	334 aa		12.79	□□□□□ -0.36
EIF4A1-231	ENST00000584054	STK32B	Q9NY57	414 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms