RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 SLIT1O75093 1534 aa13.21□□□□□ -0.29
CCDC144NL-AS1-218ENST00000583962 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
CCDC144NL-AS1-218ENST00000583962 KLHL40Q2TBA0 621 aa13.21□□□□□ -0.29
CCDC144NL-AS1-218ENST00000583962 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 CTAGE5O15320 804 aa13.21□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 SSFA2P28290 1259 aa13.21□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 PROSER2Q86WR7 435 aaPredicted RBP13.21□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 RMI1Q9H9A7 625 aa13.21□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 CPS1P31327 1500 aa13.2□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 SYNMO15061 1565 aa13.2□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 UBR1Q8IWV7 1749 aa13.2□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 KIF3CO14782 793 aa13.2□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 PAX3P23760 479 aa13.2□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 FKBP5Q13451 457 aaPredicted RBP13.2□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 CCDC112Q8NEF3 446 aa13.2□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 MAPK8IP3Q9UPT6 1336 aa13.2□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 IQGAP3Q86VI3 1631 aa13.2□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 SRLQ86TD4 932 aa13.19□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 C16orf45Q96MC5 204 aaPredicted RBP13.19□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.19□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 KCNA6P17658 529 aa13.19□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 HDAC1Q13547 482 aaPredicted RBP13.19□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 MICALL1Q8N3F8 863 aa13.19□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 SMC2O95347 1197 aa13.18□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 IQGAP1P46940 1657 aa13.18□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 GCC2Q8IWJ2 1684 aa13.18□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 FAM210AQ96ND0 272 aa13.18□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 LMAN1P49257 510 aa13.17□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 NBPF8Q3BBV2 869 aa13.17□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 C1QTNF12Q5T7M4 302 aa13.17□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 HTATSF1O43719 755 aaKnown RBP13.17□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 PRPF40AO75400 957 aaKnown RBP13.17□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 SPC24Q8NBT2 197 aa13.17□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 ZNF397Q8NF99 534 aaPredicted RBP13.17□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 ABCD1P33897 745 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 FAM177A1Q8N128 213 aaPredicted RBP13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 ERCC4Q92889 916 aaPredicted RBP13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 CCDC34Q96HJ3 373 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 USP25Q9UHP3 1055 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 CCP110O43303 1012 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 TRIM74Q86UV6 250 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 TRIM73Q86UV7 250 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 CREBRFQ8IUR6 639 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 ANAPC4Q9UJX5 808 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 PLEKHG1Q9ULL1 1385 aa13.16□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 GOLGA6CA6NDK9 693 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 GOLGA6BA6NDN3 693 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 GOLGA6DP0CG33 693 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 GSCP56915 257 aaPredicted RBP13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 TSHZ1Q6ZSZ6 1077 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 GOLGA6AQ9NYA3 693 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 CAPN15O75808 1086 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 TRDNQ13061 729 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 ZRSR2Q15696 482 aaKnown RBP13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 ANKRD23Q86SG2 305 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 MRFAP1L1Q96HT8 127 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 E9PCH4 1651 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 ZNF445P59923 1031 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 RAB3GAP1Q15042 981 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
CCDC144NL-AS1-218ENST00000583962 AP1G2O75843 785 aa13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 MAGEA9P43362 315 aa13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 TPM4P67936 248 aa13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 DHX8Q14562 1220 aaKnown RBP13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 LEKR1Q6ZMV7 388 aa13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 GBP6Q6ZN66 633 aa13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 ETAA1Q9NY74 926 aa13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 MYBBP1AQ9BQG0 1328 aaKnown RBP13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 FOXD4L5Q5VV16 416 aaPredicted RBP13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 MMS22LQ6ZRQ5 1243 aa13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 RPUSD2Q8IZ73 545 aaKnown RBP13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 FOXD4L4Q8WXT5 416 aaPredicted RBP13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 COG6Q9Y2V7 657 aa13.14□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 CTIFO43310 598 aaKnown RBP13.13□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 ST5P78524 1137 aa13.13□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 TSGA10IPQ3SY00 556 aa13.13□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 CADPS2Q86UW7 1296 aa13.13□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 KLHL23Q8NBE8 558 aa13.13□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 CWC27Q6UX04 472 aaKnown RBP13.13□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 PEX19P40855 299 aa13.12□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 LRPPRCP42704 1394 aaKnown RBP13.12□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 BCAR3O75815 825 aa13.12□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 MUM1L1Q5H9M0 696 aa13.12□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 SMARCE1Q969G3 411 aa13.12□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 AK7Q96M32 723 aa13.12□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 FRMD3A2A2Y4 597 aa13.12□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 BAG4O95429 457 aaKnown RBP13.12□□□□□ -0.31
CCDC144NL-AS1-218ENST00000583962 PDRG1Q9NUG6 133 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms