RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
CASC3-209ENST00000583902 CICQ96RK0 1608 aaPredicted RBP11.78□□□□□ -0.52
CASC3-209ENST00000583902 NHSQ6T4R5 1651 aa11.78□□□□□ -0.52
CASC3-209ENST00000583902 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.52
CASC3-209ENST00000583902 KRT27Q7Z3Y8 459 aa11.77□□□□□ -0.53
CASC3-209ENST00000583902 PIGBQ92521 554 aa11.77□□□□□ -0.53
CASC3-209ENST00000583902 API5Q9BZZ5 524 aaKnown RBP11.77□□□□□ -0.53
CASC3-209ENST00000583902 MIS18AQ9NYP9 233 aa11.77□□□□□ -0.53
CASC3-209ENST00000583902 DBF4Q9UBU7 674 aaPredicted RBP11.77□□□□□ -0.53
CASC3-209ENST00000583902 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
CASC3-209ENST00000583902 CANXP27824 592 aaKnown RBP11.76□□□□□ -0.53
CASC3-209ENST00000583902 PRIM1P49642 420 aaKnown RBP11.76□□□□□ -0.53
CASC3-209ENST00000583902 HDGFL1Q5TGJ6 251 aa11.76□□□□□ -0.53
CASC3-209ENST00000583902 ZKSCAN2Q63HK3 967 aa11.76□□□□□ -0.53
CASC3-209ENST00000583902 TSPYL6Q8N831 410 aa11.76□□□□□ -0.53
CASC3-209ENST00000583902 SSH1Q8WYL5 1049 aa11.76□□□□□ -0.53
CASC3-209ENST00000583902 STARD3NLO95772 234 aa11.75□□□□□ -0.53
CASC3-209ENST00000583902 ATF7IPQ6VMQ6 1270 aa11.75□□□□□ -0.53
CASC3-209ENST00000583902 ZNF496Q96IT1 587 aaPredicted RBP11.75□□□□□ -0.53
CASC3-209ENST00000583902 BCL11BQ9C0K0 894 aaPredicted RBP11.75□□□□□ -0.53
CASC3-209ENST00000583902 HYPKQ9NX55 129 aa11.75□□□□□ -0.53
CASC3-209ENST00000583902 KCPQ6ZWJ8 1503 aa11.75□□□□□ -0.53
CASC3-209ENST00000583902 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
CASC3-209ENST00000583902 MRPL50Q8N5N7 158 aaKnown RBP11.74□□□□□ -0.53
CASC3-209ENST00000583902 DDX21Q9NR30 783 aaKnown RBP eCLIP11.74□□□□□ -0.53
CASC3-209ENST00000583902 ATG3Q9NT62 314 aa11.74□□□□□ -0.53
CASC3-209ENST00000583902 SYTL4Q96C24 671 aaPredicted RBP11.73□□□□□ -0.53
CASC3-209ENST00000583902 IBTKQ9P2D0 1353 aaPredicted RBP11.73□□□□□ -0.53
CASC3-209ENST00000583902 ELL2O00472 640 aaPredicted RBP11.72□□□□□ -0.53
CASC3-209ENST00000583902 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
CASC3-209ENST00000583902 KCNQ3O43525 872 aa11.72□□□□□ -0.53
CASC3-209ENST00000583902 BCAR3O75815 825 aa11.72□□□□□ -0.53
CASC3-209ENST00000583902 DDX58O95786 925 aaKnown RBP11.72□□□□□ -0.53
CASC3-209ENST00000583902 SLC39A6Q13433 755 aa11.72□□□□□ -0.53
CASC3-209ENST00000583902 FTSJ3Q8IY81 847 aaKnown RBP11.72□□□□□ -0.53
CASC3-209ENST00000583902 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
CASC3-209ENST00000583902 PALLDQ8WX93 1383 aa11.71□□□□□ -0.53
CASC3-209ENST00000583902 RGL2O15211 777 aa11.71□□□□□ -0.53
CASC3-209ENST00000583902 DZIP1LQ8IYY4 767 aaKnown RBP11.71□□□□□ -0.53
CASC3-209ENST00000583902 ASAP1Q9ULH1 1129 aa11.71□□□□□ -0.53
CASC3-209ENST00000583902 HDAC5Q9UQL6 1122 aa11.71□□□□□ -0.53
CASC3-209ENST00000583902 BTAF1O14981 1849 aa11.71□□□□□ -0.54
CASC3-209ENST00000583902 PXDNLA1KZ92 1463 aa11.7□□□□□ -0.54
CASC3-209ENST00000583902 LY75O60449 1722 aa11.7□□□□□ -0.54
CASC3-209ENST00000583902 LOC102724428A0A0B4J2F2 783 aa11.7□□□□□ -0.54
CASC3-209ENST00000583902 SIK1P57059 783 aa11.7□□□□□ -0.54
CASC3-209ENST00000583902 FLIIQ13045 1269 aa11.7□□□□□ -0.54
CASC3-209ENST00000583902 SLC27A3Q5K4L6 730 aa11.7□□□□□ -0.54
CASC3-209ENST00000583902 RGS17Q9UGC6 210 aaPredicted RBP11.7□□□□□ -0.54
CASC3-209ENST00000583902 NOB1Q9ULX3 412 aaKnown RBP11.7□□□□□ -0.54
CASC3-209ENST00000583902 DDX19BQ9UMR2 479 aa11.7□□□□□ -0.54
CASC3-209ENST00000583902 RGPD3A6NKT7 1758 aaPredicted RBP11.69□□□□□ -0.54
CASC3-209ENST00000583902 RGPD4Q7Z3J3 1758 aa11.69□□□□□ -0.54
CASC3-209ENST00000583902 C5P01031 1676 aa11.69□□□□□ -0.54
CASC3-209ENST00000583902 TRIM27P14373 513 aa11.69□□□□□ -0.54
CASC3-209ENST00000583902 EIF2S2P20042 333 aaKnown RBP11.69□□□□□ -0.54
CASC3-209ENST00000583902 CCT4P50991 539 aaKnown RBP11.69□□□□□ -0.54
CASC3-209ENST00000583902 KRT24Q2M2I5 525 aa11.69□□□□□ -0.54
CASC3-209ENST00000583902 RC3H1Q5TC82 1133 aaKnown RBP11.69□□□□□ -0.54
CASC3-209ENST00000583902 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
CASC3-209ENST00000583902 FRAT1Q92837 279 aaPredicted RBP11.69□□□□□ -0.54
CASC3-209ENST00000583902 N4BP2Q86UW6 1770 aaPredicted RBP11.69□□□□□ -0.54
CASC3-209ENST00000583902 RGS12O14924 1447 aa11.69□□□□□ -0.54
CASC3-209ENST00000583902 ABCC4O15439 1325 aa11.68□□□□□ -0.54
CASC3-209ENST00000583902 PLSCR1O15162 318 aa11.68□□□□□ -0.54
CASC3-209ENST00000583902 PTCD1O75127 700 aaKnown RBP11.68□□□□□ -0.54
CASC3-209ENST00000583902 ACSBG1Q96GR2 724 aa11.68□□□□□ -0.54
CASC3-209ENST00000583902 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
CASC3-209ENST00000583902 A0A087WZG4 1122 aa11.67□□□□□ -0.54
CASC3-209ENST00000583902 ATP6V1AP38606 617 aa11.67□□□□□ -0.54
CASC3-209ENST00000583902 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
CASC3-209ENST00000583902 FKBP5Q13451 457 aaPredicted RBP11.67□□□□□ -0.54
CASC3-209ENST00000583902 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
CASC3-209ENST00000583902 INTS3Q68E01 1043 aaKnown RBP11.67□□□□□ -0.54
CASC3-209ENST00000583902 POTEAQ6S8J7 498 aa11.67□□□□□ -0.54
CASC3-209ENST00000583902 CCDC125Q86Z20 511 aa11.67□□□□□ -0.54
CASC3-209ENST00000583902 BCL2L13Q9BXK5 485 aa11.67□□□□□ -0.54
CASC3-209ENST00000583902 USP16Q9Y5T5 823 aa11.67□□□□□ -0.54
CASC3-209ENST00000583902 TJP1Q07157 1748 aa11.66□□□□□ -0.54
CASC3-209ENST00000583902 CNTNAP4Q9C0A0 1308 aa11.66□□□□□ -0.54
CASC3-209ENST00000583902 RREB1Q92766 1687 aa11.66□□□□□ -0.54
CASC3-209ENST00000583902 CYP19A1P11511 503 aaPredicted RBP11.66□□□□□ -0.54
CASC3-209ENST00000583902 PDIA6Q15084 440 aa11.66□□□□□ -0.54
CASC3-209ENST00000583902 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
CASC3-209ENST00000583902 ATP10DQ9P241 1426 aa11.66□□□□□ -0.54
CASC3-209ENST00000583902 COL5A3P25940 1745 aaPredicted RBP11.66□□□□□ -0.54
CASC3-209ENST00000583902 KCNQ2O43526 872 aa11.65□□□□□ -0.54
CASC3-209ENST00000583902 NEXNQ0ZGT2 675 aa11.65□□□□□ -0.54
CASC3-209ENST00000583902 FKBP8Q14318 412 aa11.65□□□□□ -0.54
CASC3-209ENST00000583902 ERVV-1B6SEH8 477 aa11.64□□□□□ -0.55
CASC3-209ENST00000583902 ALDH1L1O75891 902 aa11.64□□□□□ -0.55
CASC3-209ENST00000583902 HSP90AB3PQ58FF7 597 aa11.64□□□□□ -0.55
CASC3-209ENST00000583902 ANKRD13DQ6ZTN6 518 aa11.64□□□□□ -0.55
CASC3-209ENST00000583902 DNAJC10Q8IXB1 793 aa11.64□□□□□ -0.55
CASC3-209ENST00000583902 PLBD2Q8NHP8 589 aa11.64□□□□□ -0.55
CASC3-209ENST00000583902 DNAAF4Q8WXU2 420 aa11.64□□□□□ -0.55
CASC3-209ENST00000583902 CCDC87Q9NVE4 849 aa11.64□□□□□ -0.55
CASC3-209ENST00000583902 PPP4R2Q9NY27 417 aa11.64□□□□□ -0.55
CASC3-209ENST00000583902 TAF1LQ8IZX4 1826 aa11.64□□□□□ -0.55
CASC3-209ENST00000583902 PLIN1O60240 522 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms