RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 LRRC4BQ9NT99 713 aa17.55■□□□□ 0.4
ITGB4-209ENST00000583327 DBF4Q9UBU7 674 aaPredicted RBP17.55■□□□□ 0.4
ITGB4-209ENST00000583327 KAT6BQ8WYB5 2073 aa17.55■□□□□ 0.4
ITGB4-209ENST00000583327 LAMB4A4D0S4 1761 aa17.54■□□□□ 0.4
ITGB4-209ENST00000583327 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
ITGB4-209ENST00000583327 STARD3NLO95772 234 aa17.54■□□□□ 0.4
ITGB4-209ENST00000583327 NBPF14Q5TI25 921 aa17.54■□□□□ 0.4
ITGB4-209ENST00000583327 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
ITGB4-209ENST00000583327 INTS5Q6P9B9 1019 aaKnown RBP17.54■□□□□ 0.4
ITGB4-209ENST00000583327 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
ITGB4-209ENST00000583327 A1BGP04217 495 aa17.53■□□□□ 0.4
ITGB4-209ENST00000583327 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
ITGB4-209ENST00000583327 TXNRD1Q16881 649 aa17.53■□□□□ 0.4
ITGB4-209ENST00000583327 RC3H1Q5TC82 1133 aaKnown RBP17.53■□□□□ 0.4
ITGB4-209ENST00000583327 LINC00116Q8NCU8 138 aa17.53■□□□□ 0.4
ITGB4-209ENST00000583327 CAMKK2Q96RR4 588 aa17.53■□□□□ 0.4
ITGB4-209ENST00000583327 CCNL1Q9UK58 526 aaPredicted RBP17.53■□□□□ 0.4
ITGB4-209ENST00000583327 RGPD3A6NKT7 1758 aaPredicted RBP17.53■□□□□ 0.4
ITGB4-209ENST00000583327 RGPD4Q7Z3J3 1758 aa17.53■□□□□ 0.4
ITGB4-209ENST00000583327 RREB1Q92766 1687 aa17.52■□□□□ 0.4
ITGB4-209ENST00000583327 TCERG1O14776 1098 aaKnown RBP17.52■□□□□ 0.4
ITGB4-209ENST00000583327 PROSER3Q2NL68 480 aa17.52■□□□□ 0.4
ITGB4-209ENST00000583327 NECTIN2Q92692 538 aa17.52■□□□□ 0.4
ITGB4-209ENST00000583327 CHPF2Q9P2E5 772 aa17.52■□□□□ 0.4
ITGB4-209ENST00000583327 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.39
ITGB4-209ENST00000583327 HMGB2P26583 209 aaKnown RBP17.51■□□□□ 0.39
ITGB4-209ENST00000583327 KCNQ4P56696 695 aa17.51■□□□□ 0.39
ITGB4-209ENST00000583327 ARHGAP45Q92619 1136 aa17.51■□□□□ 0.39
ITGB4-209ENST00000583327 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
ITGB4-209ENST00000583327 SMC4Q9NTJ3 1288 aa17.51■□□□□ 0.39
ITGB4-209ENST00000583327 HYPKQ9NX55 129 aa17.51■□□□□ 0.39
ITGB4-209ENST00000583327 CNTNAP4Q9C0A0 1308 aa17.5■□□□□ 0.39
ITGB4-209ENST00000583327 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
ITGB4-209ENST00000583327 G2E3Q7L622 706 aa17.5■□□□□ 0.39
ITGB4-209ENST00000583327 BCL2L13Q9BXK5 485 aa17.5■□□□□ 0.39
ITGB4-209ENST00000583327 SUPT16HQ9Y5B9 1047 aaKnown RBP17.5■□□□□ 0.39
ITGB4-209ENST00000583327 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
ITGB4-209ENST00000583327 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
ITGB4-209ENST00000583327 CCDC87Q9NVE4 849 aa17.49■□□□□ 0.39
ITGB4-209ENST00000583327 ANXA1P04083 346 aa17.48■□□□□ 0.39
ITGB4-209ENST00000583327 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
ITGB4-209ENST00000583327 ILDR2Q71H61 639 aa17.48■□□□□ 0.39
ITGB4-209ENST00000583327 UPF1Q92900 1129 aaKnown RBP eCLIP17.48■□□□□ 0.39
ITGB4-209ENST00000583327 NOB1Q9ULX3 412 aaKnown RBP17.48■□□□□ 0.39
ITGB4-209ENST00000583327 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
ITGB4-209ENST00000583327 TAF1LQ8IZX4 1826 aa17.48■□□□□ 0.39
ITGB4-209ENST00000583327 CACNA1FO60840 1977 aa17.48■□□□□ 0.39
ITGB4-209ENST00000583327 PTPRCP08575 1304 aa17.47■□□□□ 0.39
ITGB4-209ENST00000583327 KIF16BQ96L93 1317 aa17.47■□□□□ 0.39
ITGB4-209ENST00000583327 RRP1P56182 461 aaKnown RBP17.47■□□□□ 0.39
ITGB4-209ENST00000583327 RPS6KA4O75676 772 aa17.46■□□□□ 0.39
ITGB4-209ENST00000583327 BAG6P46379 1132 aa17.46■□□□□ 0.39
ITGB4-209ENST00000583327 PIP4K2AP48426 406 aaPredicted RBP17.46■□□□□ 0.39
ITGB4-209ENST00000583327 EN1Q05925 392 aaPredicted RBP17.46■□□□□ 0.39
ITGB4-209ENST00000583327 FLIIQ13045 1269 aa17.46■□□□□ 0.39
ITGB4-209ENST00000583327 EZH2Q15910 746 aaKnown RBP17.46■□□□□ 0.39
ITGB4-209ENST00000583327 MYH14Q7Z406 1995 aaKnown RBP17.46■□□□□ 0.39
ITGB4-209ENST00000583327 IPO8O15397 1037 aaKnown RBP17.45■□□□□ 0.38
ITGB4-209ENST00000583327 MYL6BP14649 208 aa17.45■□□□□ 0.38
ITGB4-209ENST00000583327 SF3B2Q13435 895 aaKnown RBP17.45■□□□□ 0.38
ITGB4-209ENST00000583327 ATF7IPQ6VMQ6 1270 aa17.45■□□□□ 0.38
ITGB4-209ENST00000583327 COPS6Q7L5N1 327 aa17.45■□□□□ 0.38
ITGB4-209ENST00000583327 C4BP0C0L5 1744 aa17.44■□□□□ 0.38
ITGB4-209ENST00000583327 PLIN1O60240 522 aa17.44■□□□□ 0.38
ITGB4-209ENST00000583327 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
ITGB4-209ENST00000583327 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
ITGB4-209ENST00000583327 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
ITGB4-209ENST00000583327 XAGE3Q8WTP9 111 aa17.44■□□□□ 0.38
ITGB4-209ENST00000583327 AKT1S1Q96B36 256 aa17.44■□□□□ 0.38
ITGB4-209ENST00000583327 TRIM27P14373 513 aa17.43■□□□□ 0.38
ITGB4-209ENST00000583327 PDE3AQ14432 1141 aa17.43■□□□□ 0.38
ITGB4-209ENST00000583327 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
ITGB4-209ENST00000583327 KSR2Q6VAB6 950 aa17.42■□□□□ 0.38
ITGB4-209ENST00000583327 TTLL7Q6ZT98 887 aa17.42■□□□□ 0.38
ITGB4-209ENST00000583327 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
ITGB4-209ENST00000583327 AMIGO3Q86WK7 504 aa17.42■□□□□ 0.38
ITGB4-209ENST00000583327 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
ITGB4-209ENST00000583327 API5Q9BZZ5 524 aaKnown RBP17.42■□□□□ 0.38
ITGB4-209ENST00000583327 TNNQ9UQP3 1299 aa17.42■□□□□ 0.38
ITGB4-209ENST00000583327 ADCY9O60503 1353 aa17.41■□□□□ 0.38
ITGB4-209ENST00000583327 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
ITGB4-209ENST00000583327 ABCC4O15439 1325 aa17.41■□□□□ 0.38
ITGB4-209ENST00000583327 PI4KAP2A4QPH2 592 aa17.4■□□□□ 0.38
ITGB4-209ENST00000583327 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
ITGB4-209ENST00000583327 RGL2O15211 777 aa17.4■□□□□ 0.38
ITGB4-209ENST00000583327 FKBP5Q13451 457 aaPredicted RBP17.4■□□□□ 0.38
ITGB4-209ENST00000583327 C20orf194Q5TEA3 1177 aa17.4■□□□□ 0.38
ITGB4-209ENST00000583327 PI4KAP1Q8N8J0 262 aa17.4■□□□□ 0.38
ITGB4-209ENST00000583327 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
ITGB4-209ENST00000583327 MS4A1P11836 297 aa17.39■□□□□ 0.37
ITGB4-209ENST00000583327 RLBP1P12271 317 aa17.39■□□□□ 0.37
ITGB4-209ENST00000583327 ADRA2BP18089 450 aa17.39■□□□□ 0.37
ITGB4-209ENST00000583327 AIMP1Q12904 312 aaKnown RBP17.39■□□□□ 0.37
ITGB4-209ENST00000583327 ZNF827Q17R98 1081 aa17.39■□□□□ 0.37
ITGB4-209ENST00000583327 INTS3Q68E01 1043 aaKnown RBP17.39■□□□□ 0.37
ITGB4-209ENST00000583327 DZIP1LQ8IYY4 767 aaKnown RBP17.39■□□□□ 0.37
ITGB4-209ENST00000583327 RTCBQ9Y3I0 505 aaKnown RBP17.39■□□□□ 0.37
ITGB4-209ENST00000583327 A0A087WZG4 1122 aa17.38■□□□□ 0.37
ITGB4-209ENST00000583327 F6X3S4 739 aa17.38■□□□□ 0.37
ITGB4-209ENST00000583327 GNPATO15228 680 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms