RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 ZNF827Q17R98 1081 aa20.7■□□□□ 0.9
CCDC57-213ENST00000581625 TSR2Q969E8 191 aaKnown RBP20.69■□□□□ 0.9
CCDC57-213ENST00000581625 CCDC87Q9NVE4 849 aa20.69■□□□□ 0.9
CCDC57-213ENST00000581625 TFCP2L1Q9NZI6 479 aa20.68■□□□□ 0.9
CCDC57-213ENST00000581625 UBR3Q6ZT12 1888 aa20.68■□□□□ 0.9
CCDC57-213ENST00000581625 TUBGCP6Q96RT7 1819 aa20.67■□□□□ 0.9
CCDC57-213ENST00000581625 GNPATO15228 680 aa20.67■□□□□ 0.9
CCDC57-213ENST00000581625 SSFA2P28290 1259 aa20.67■□□□□ 0.9
CCDC57-213ENST00000581625 PRAMEF22A3QJZ6 481 aa20.66■□□□□ 0.9
CCDC57-213ENST00000581625 FLAD1Q8NFF5 587 aa20.66■□□□□ 0.9
CCDC57-213ENST00000581625 CHMP4AQ9BY43 222 aa20.66■□□□□ 0.9
CCDC57-213ENST00000581625 SPINK5Q9NQ38 1064 aaPredicted RBP20.66■□□□□ 0.9
CCDC57-213ENST00000581625 RTCBQ9Y3I0 505 aaKnown RBP20.66■□□□□ 0.9
CCDC57-213ENST00000581625 USP16Q9Y5T5 823 aa20.66■□□□□ 0.9
CCDC57-213ENST00000581625 ERBB4Q15303 1308 aa20.66■□□□□ 0.9
CCDC57-213ENST00000581625 RPS6KA4O75676 772 aa20.65■□□□□ 0.9
CCDC57-213ENST00000581625 ADRA2BP18089 450 aa20.65■□□□□ 0.9
CCDC57-213ENST00000581625 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
CCDC57-213ENST00000581625 INTS5Q6P9B9 1019 aaKnown RBP20.65■□□□□ 0.9
CCDC57-213ENST00000581625 MYH14Q7Z406 1995 aaKnown RBP20.65■□□□□ 0.9
CCDC57-213ENST00000581625 SLFN5Q08AF3 891 aa20.64■□□□□ 0.89
CCDC57-213ENST00000581625 R3HDM1Q15032 1099 aaKnown RBP20.64■□□□□ 0.89
CCDC57-213ENST00000581625 KRT24Q2M2I5 525 aa20.64■□□□□ 0.89
CCDC57-213ENST00000581625 ZBTB1Q9Y2K1 713 aa20.64■□□□□ 0.89
CCDC57-213ENST00000581625 PNPLA7Q6ZV29 1317 aa20.63■□□□□ 0.89
CCDC57-213ENST00000581625 COL15A1P39059 1388 aa20.62■□□□□ 0.89
CCDC57-213ENST00000581625 IL6STP40189 918 aaPredicted RBP20.62■□□□□ 0.89
CCDC57-213ENST00000581625 HDGFL1Q5TGJ6 251 aa20.62■□□□□ 0.89
CCDC57-213ENST00000581625 CASZ1Q86V15 1759 aa20.62■□□□□ 0.89
CCDC57-213ENST00000581625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.61■□□□□ 0.89
CCDC57-213ENST00000581625 TWISTNBQ3B726 338 aaPredicted RBP20.61■□□□□ 0.89
CCDC57-213ENST00000581625 C8orf58Q8NAV2 365 aa20.61■□□□□ 0.89
CCDC57-213ENST00000581625 C4AP0C0L4 1744 aa20.61■□□□□ 0.89
CCDC57-213ENST00000581625 PHF14O94880 888 aa20.6■□□□□ 0.89
CCDC57-213ENST00000581625 A1BGP04217 495 aa20.6■□□□□ 0.89
CCDC57-213ENST00000581625 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
CCDC57-213ENST00000581625 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
CCDC57-213ENST00000581625 NPM2Q86SE8 214 aaKnown RBP20.6■□□□□ 0.89
CCDC57-213ENST00000581625 TRMT2AQ8IZ69 625 aaKnown RBP20.6■□□□□ 0.89
CCDC57-213ENST00000581625 CDCA7LQ96GN5 454 aa20.6■□□□□ 0.89
CCDC57-213ENST00000581625 PSDA5PKW4 1024 aaPredicted RBP20.59■□□□□ 0.89
CCDC57-213ENST00000581625 EIF2S2P20042 333 aaKnown RBP20.59■□□□□ 0.89
CCDC57-213ENST00000581625 EIF5P55010 431 aaKnown RBP20.59■□□□□ 0.89
CCDC57-213ENST00000581625 A0A087WZG4 1122 aa20.58■□□□□ 0.89
CCDC57-213ENST00000581625 ELL2O00472 640 aaPredicted RBP20.58■□□□□ 0.89
CCDC57-213ENST00000581625 TRAPPC3LQ5T215 181 aa20.58■□□□□ 0.89
CCDC57-213ENST00000581625 AMIGO3Q86WK7 504 aa20.58■□□□□ 0.89
CCDC57-213ENST00000581625 TSPYL6Q8N831 410 aa20.58■□□□□ 0.89
CCDC57-213ENST00000581625 CCDC30Q5VVM6 783 aa20.57■□□□□ 0.88
CCDC57-213ENST00000581625 SLC16A10Q8TF71 515 aa20.57■□□□□ 0.88
CCDC57-213ENST00000581625 DBF4Q9UBU7 674 aaPredicted RBP20.57■□□□□ 0.88
CCDC57-213ENST00000581625 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
CCDC57-213ENST00000581625 RFC4P35249 363 aa20.56■□□□□ 0.88
CCDC57-213ENST00000581625 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
CCDC57-213ENST00000581625 COL23A1Q86Y22 540 aaPredicted RBP20.56■□□□□ 0.88
CCDC57-213ENST00000581625 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
CCDC57-213ENST00000581625 DDX21Q9NR30 783 aaKnown RBP eCLIP20.56■□□□□ 0.88
CCDC57-213ENST00000581625 SCN7AQ01118 1682 aa20.56■□□□□ 0.88
CCDC57-213ENST00000581625 MSH5O43196 834 aa20.55■□□□□ 0.88
CCDC57-213ENST00000581625 CT47B1P0C2W7 299 aaPredicted RBP20.55■□□□□ 0.88
CCDC57-213ENST00000581625 ARHGEF1Q92888 912 aaKnown RBP20.55■□□□□ 0.88
CCDC57-213ENST00000581625 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
CCDC57-213ENST00000581625 USP42Q9H9J4 1324 aaKnown RBP20.54■□□□□ 0.88
CCDC57-213ENST00000581625 PIP4K2AP48426 406 aaPredicted RBP20.54■□□□□ 0.88
CCDC57-213ENST00000581625 PDIA6Q15084 440 aa20.54■□□□□ 0.88
CCDC57-213ENST00000581625 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
CCDC57-213ENST00000581625 ZNF428Q96B54 188 aa20.54■□□□□ 0.88
CCDC57-213ENST00000581625 STK31Q9BXU1 1019 aa20.54■□□□□ 0.88
CCDC57-213ENST00000581625 CHPF2Q9P2E5 772 aa20.54■□□□□ 0.88
CCDC57-213ENST00000581625 VAMP4O75379 141 aa20.53■□□□□ 0.88
CCDC57-213ENST00000581625 MYL6BP14649 208 aa20.53■□□□□ 0.88
CCDC57-213ENST00000581625 HYPKQ9NX55 129 aa20.53■□□□□ 0.88
CCDC57-213ENST00000581625 BCORQ6W2J9 1755 aa20.53■□□□□ 0.88
CCDC57-213ENST00000581625 RGL2O15211 777 aa20.52■□□□□ 0.88
CCDC57-213ENST00000581625 LRP10Q7Z4F1 713 aa20.52■□□□□ 0.88
CCDC57-213ENST00000581625 DZIP3Q86Y13 1208 aaKnown RBP20.52■□□□□ 0.88
CCDC57-213ENST00000581625 MTFR1LQ9H019 292 aa20.52■□□□□ 0.88
CCDC57-213ENST00000581625 NARFQ9UHQ1 456 aa20.52■□□□□ 0.88
CCDC57-213ENST00000581625 ZPR1O75312 459 aa20.51■□□□□ 0.87
CCDC57-213ENST00000581625 SMIM5Q71RC9 77 aa20.51■□□□□ 0.87
CCDC57-213ENST00000581625 PDGFDQ9GZP0 370 aaPredicted RBP20.51■□□□□ 0.87
CCDC57-213ENST00000581625 PROSER3Q2NL68 480 aa20.5■□□□□ 0.87
CCDC57-213ENST00000581625 KIF6Q6ZMV9 814 aa20.5■□□□□ 0.87
CCDC57-213ENST00000581625 YTHDC1Q96MU7 727 aaKnown RBP20.5■□□□□ 0.87
CCDC57-213ENST00000581625 COL24A1Q17RW2 1714 aa20.49■□□□□ 0.87
CCDC57-213ENST00000581625 ANXA1P04083 346 aa20.48■□□□□ 0.87
CCDC57-213ENST00000581625 GYS1P13807 737 aa20.48■□□□□ 0.87
CCDC57-213ENST00000581625 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
CCDC57-213ENST00000581625 CAMTA2O94983 1202 aa20.47■□□□□ 0.87
CCDC57-213ENST00000581625 USPL1Q5W0Q7 1092 aa20.47■□□□□ 0.87
CCDC57-213ENST00000581625 NLGN1Q8N2Q7 840 aa20.47■□□□□ 0.87
CCDC57-213ENST00000581625 ARXQ96QS3 562 aa20.47■□□□□ 0.87
CCDC57-213ENST00000581625 SRP68Q9UHB9 627 aaKnown RBP20.47■□□□□ 0.87
CCDC57-213ENST00000581625 TBC1D2BQ9UPU7 963 aa20.47■□□□□ 0.87
CCDC57-213ENST00000581625 MAP3K15Q6ZN16 1313 aa20.47■□□□□ 0.87
CCDC57-213ENST00000581625 ERVV-1B6SEH8 477 aa20.46■□□□□ 0.87
CCDC57-213ENST00000581625 ZBTB7AO95365 584 aa20.46■□□□□ 0.87
CCDC57-213ENST00000581625 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
CCDC57-213ENST00000581625 XAGE3Q8WTP9 111 aa20.46■□□□□ 0.87
CCDC57-213ENST00000581625 CACNA1FO60840 1977 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms