RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 HACL1Q9UJ83 578 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 AXIN2Q9Y2T1 843 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 UNC80Q8N2C7 3258 aa3.57□□□□□ -1.84
CTC1-207ENST00000580299 BCORQ6W2J9 1755 aa3.56□□□□□ -1.84
CTC1-207ENST00000580299 DDNO94850 711 aaPredicted RBP3.56□□□□□ -1.84
CTC1-207ENST00000580299 NBPF1Q3BBV0 1214 aa3.56□□□□□ -1.84
CTC1-207ENST00000580299 KANK4Q5T7N3 995 aaPredicted RBP3.56□□□□□ -1.84
CTC1-207ENST00000580299 SMIM5Q71RC9 77 aa3.56□□□□□ -1.84
CTC1-207ENST00000580299 ARHGEF25Q86VW2 580 aa3.56□□□□□ -1.84
CTC1-207ENST00000580299 L3MBTL3Q96JM7 780 aaPredicted RBP3.56□□□□□ -1.84
CTC1-207ENST00000580299 C14orf93Q9H972 538 aaKnown RBP3.56□□□□□ -1.84
CTC1-207ENST00000580299 HDAC9Q9UKV0 1011 aa3.56□□□□□ -1.84
CTC1-207ENST00000580299 TLL2Q9Y6L7 1015 aa3.56□□□□□ -1.84
CTC1-207ENST00000580299 CCDC61Q9Y6R9 512 aa3.56□□□□□ -1.84
CTC1-207ENST00000580299 PLEKHG3A1L390 1219 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 SOX12O15370 315 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 CHRNA5P30532 468 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 EPHX2P34913 555 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 RFC4P35249 363 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 RGL3Q3MIN7 710 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 MAP1SQ66K74 1059 aaPredicted RBP3.55□□□□□ -1.84
CTC1-207ENST00000580299 INTS3Q68E01 1043 aaKnown RBP3.55□□□□□ -1.84
CTC1-207ENST00000580299 CCDC24Q8N4L8 307 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 TTLL6Q8N841 843 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 HHIPL1Q96JK4 782 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 TRAK1Q9UPV9 953 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 RTCBQ9Y3I0 505 aaKnown RBP3.55□□□□□ -1.84
CTC1-207ENST00000580299 NRXN2Q9P2S2 1712 aa3.55□□□□□ -1.84
CTC1-207ENST00000580299 KIAA0100Q14667 2235 aaKnown RBP3.54□□□□□ -1.84
CTC1-207ENST00000580299 COL11A2P13942 1736 aaPredicted RBP3.54□□□□□ -1.84
CTC1-207ENST00000580299 MON2Q7Z3U7 1717 aa3.54□□□□□ -1.84
CTC1-207ENST00000580299 NFKBIEO00221 500 aa3.54□□□□□ -1.84
CTC1-207ENST00000580299 PPEF1O14829 653 aaPredicted RBP3.54□□□□□ -1.84
CTC1-207ENST00000580299 LMOD1P29536 600 aaPredicted RBP3.54□□□□□ -1.84
CTC1-207ENST00000580299 TRAPPC3LQ5T215 181 aa3.54□□□□□ -1.84
CTC1-207ENST00000580299 FBXO46Q6PJ61 603 aaPredicted RBP3.54□□□□□ -1.84
CTC1-207ENST00000580299 CHRDL2Q6WN34 429 aa3.54□□□□□ -1.84
CTC1-207ENST00000580299 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.54□□□□□ -1.84
CTC1-207ENST00000580299 ZCRB1Q8TBF4 217 aaKnown RBP3.54□□□□□ -1.84
CTC1-207ENST00000580299 TAOK3Q9H2K8 898 aa3.54□□□□□ -1.84
CTC1-207ENST00000580299 SSUH2Q9Y2M2 353 aa3.54□□□□□ -1.84
CTC1-207ENST00000580299 ANKRD31Q8N7Z5 1873 aa3.54□□□□□ -1.84
CTC1-207ENST00000580299 ANKRD26Q9UPS8 1709 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 INSRP06213 1382 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 USP31Q70CQ4 1352 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 LTBP3Q9NS15 1303 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 MKI67P46013 3256 aaKnown RBP3.53□□□□□ -1.84
CTC1-207ENST00000580299 TRPA1O75762 1119 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 SRPK2P78362 688 aaKnown RBP3.53□□□□□ -1.84
CTC1-207ENST00000580299 CFAP70Q5T0N1 1121 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 SOGA3Q5TF21 947 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 MPRIPQ6WCQ1 1025 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 BICDL1Q6ZP65 573 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 AMIGO3Q86WK7 504 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 ANKRD24Q8TF21 1146 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 SYMPKQ92797 1274 aaKnown RBP3.53□□□□□ -1.84
CTC1-207ENST00000580299 ZNF692Q9BU19 519 aaPredicted RBP3.53□□□□□ -1.84
CTC1-207ENST00000580299 CDK19Q9BWU1 502 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 STXBP5LQ9Y2K9 1186 aa3.53□□□□□ -1.84
CTC1-207ENST00000580299 MYH14Q7Z406 1995 aaKnown RBP3.52□□□□□ -1.85
CTC1-207ENST00000580299 CGNL1Q0VF96 1302 aa3.52□□□□□ -1.85
CTC1-207ENST00000580299 SLX4Q8IY92 1834 aa3.52□□□□□ -1.85
CTC1-207ENST00000580299 A0A1W2PPC1 479 aa3.52□□□□□ -1.85
CTC1-207ENST00000580299 H0YGN5 161 aa3.52□□□□□ -1.85
CTC1-207ENST00000580299 H0YIN7 160 aa3.52□□□□□ -1.85
CTC1-207ENST00000580299 GYS1P13807 737 aa3.52□□□□□ -1.85
CTC1-207ENST00000580299 SAPCD2Q86UD0 394 aa3.52□□□□□ -1.85
CTC1-207ENST00000580299 REM2Q8IYK8 340 aaPredicted RBP3.52□□□□□ -1.85
CTC1-207ENST00000580299 LINC00116Q8NCU8 138 aa3.52□□□□□ -1.85
CTC1-207ENST00000580299 OTUD5Q96G74 571 aa3.52□□□□□ -1.85
CTC1-207ENST00000580299 PDZRN3Q9UPQ7 1066 aa3.52□□□□□ -1.85
CTC1-207ENST00000580299 ERBB4Q15303 1308 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 RNF123Q5XPI4 1314 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 TTC21AQ8NDW8 1320 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 PCDH11XQ9BZA7 1347 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 PCDH11YQ9BZA8 1340 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 TMEM265A0A087WTH1 108 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 LOC102724428A0A0B4J2F2 783 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 CELF2O95319 508 aaKnown RBP3.51□□□□□ -1.85
CTC1-207ENST00000580299 ATP6V1AP38606 617 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 SIK1P57059 783 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 GPR153Q6NV75 609 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 C2CD5Q86YS7 1000 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 CCDC102AQ96A19 550 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 TMEM106CQ9BVX2 250 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 RNF186Q9NXI6 227 aa3.51□□□□□ -1.85
CTC1-207ENST00000580299 RBM27Q9P2N5 1060 aaKnown RBP3.51□□□□□ -1.85
CTC1-207ENST00000580299 POLR2AP24928 1970 aaKnown RBP3.51□□□□□ -1.85
CTC1-207ENST00000580299 SYNGAP1Q96PV0 1343 aa3.5□□□□□ -1.85
CTC1-207ENST00000580299 POTEFA5A3E0 1075 aa3.5□□□□□ -1.85
CTC1-207ENST00000580299 C21orf2O43822 256 aa3.5□□□□□ -1.85
CTC1-207ENST00000580299 HUNKP57058 714 aa3.5□□□□□ -1.85
CTC1-207ENST00000580299 CST9Q5W186 159 aa3.5□□□□□ -1.85
CTC1-207ENST00000580299 USP50Q70EL3 339 aaPredicted RBP3.5□□□□□ -1.85
CTC1-207ENST00000580299 GPC2Q8N158 579 aa3.5□□□□□ -1.85
CTC1-207ENST00000580299 DEFB123Q8N688 67 aa3.5□□□□□ -1.85
CTC1-207ENST00000580299 RAPGEF4Q8WZA2 1011 aa3.5□□□□□ -1.85
CTC1-207ENST00000580299 ARHGEF1Q92888 912 aaKnown RBP3.5□□□□□ -1.85
CTC1-207ENST00000580299 ZNF408Q9H9D4 720 aa3.5□□□□□ -1.85
CTC1-207ENST00000580299 WASHC2AQ641Q2 1341 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms