RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 COL15A1P39059 1388 aa21.87■■□□□ 1.09
TVP23B-206ENST00000574226 ZBTB1Q9Y2K1 713 aa21.86■■□□□ 1.09
TVP23B-206ENST00000574226 MYBBP1AQ9BQG0 1328 aaKnown RBP21.85■■□□□ 1.09
TVP23B-206ENST00000574226 MAPK8IP3Q9UPT6 1336 aa21.85■■□□□ 1.09
TVP23B-206ENST00000574226 YBX3P16989 372 aaKnown RBP eCLIP21.85■■□□□ 1.09
TVP23B-206ENST00000574226 NPM2Q86SE8 214 aaKnown RBP21.85■■□□□ 1.09
TVP23B-206ENST00000574226 SRP68Q9UHB9 627 aaKnown RBP21.85■■□□□ 1.09
TVP23B-206ENST00000574226 C10orf71Q711Q0 1435 aa21.85■■□□□ 1.09
TVP23B-206ENST00000574226 MCM10Q7L590 875 aa21.84■■□□□ 1.09
TVP23B-206ENST00000574226 PLEKHF1Q96S99 279 aa21.84■■□□□ 1.09
TVP23B-206ENST00000574226 UTRNP46939 3433 aa21.84■■□□□ 1.09
TVP23B-206ENST00000574226 EIF5P55010 431 aaKnown RBP21.83■■□□□ 1.09
TVP23B-206ENST00000574226 FKBP8Q14318 412 aa21.83■■□□□ 1.09
TVP23B-206ENST00000574226 TAF7Q15545 349 aaPredicted RBP21.83■■□□□ 1.09
TVP23B-206ENST00000574226 PNISRQ8TF01 805 aaKnown RBP21.83■■□□□ 1.09
TVP23B-206ENST00000574226 CANXP27824 592 aaKnown RBP21.82■■□□□ 1.08
TVP23B-206ENST00000574226 IL6STP40189 918 aaPredicted RBP21.82■■□□□ 1.08
TVP23B-206ENST00000574226 NFE2L2Q16236 605 aa21.82■■□□□ 1.08
TVP23B-206ENST00000574226 USPL1Q5W0Q7 1092 aa21.82■■□□□ 1.08
TVP23B-206ENST00000574226 DLG5Q8TDM6 1919 aa21.82■■□□□ 1.08
TVP23B-206ENST00000574226 SNRPA1P09661 255 aaKnown RBP21.81■■□□□ 1.08
TVP23B-206ENST00000574226 TM4SF1P30408 202 aa21.81■■□□□ 1.08
TVP23B-206ENST00000574226 PXDNLA1KZ92 1463 aa21.8■■□□□ 1.08
TVP23B-206ENST00000574226 ZNF784Q8NCA9 323 aaPredicted RBP21.8■■□□□ 1.08
TVP23B-206ENST00000574226 GOLGB1Q14789 3259 aaKnown RBP21.79■■□□□ 1.08
TVP23B-206ENST00000574226 POLRMTO00411 1230 aaKnown RBP21.78■■□□□ 1.08
TVP23B-206ENST00000574226 DDR1Q08345 913 aa21.78■■□□□ 1.08
TVP23B-206ENST00000574226 DCTN1Q14203 1278 aa21.78■■□□□ 1.08
TVP23B-206ENST00000574226 KCNQ3O43525 872 aa21.77■■□□□ 1.08
TVP23B-206ENST00000574226 KIAA1551Q9HCM1 1747 aa21.77■■□□□ 1.08
TVP23B-206ENST00000574226 LMOD3Q0VAK6 560 aa21.76■■□□□ 1.07
TVP23B-206ENST00000574226 NFIXQ14938 502 aa21.76■■□□□ 1.07
TVP23B-206ENST00000574226 N4BP2Q86UW6 1770 aaPredicted RBP21.76■■□□□ 1.07
TVP23B-206ENST00000574226 A0A0G2JLW4 131 aa21.74■■□□□ 1.07
TVP23B-206ENST00000574226 A1BGP04217 495 aa21.74■■□□□ 1.07
TVP23B-206ENST00000574226 WDR43Q15061 677 aaKnown RBP eCLIP21.74■■□□□ 1.07
TVP23B-206ENST00000574226 BCL2L12Q9HB09 334 aa21.74■■□□□ 1.07
TVP23B-206ENST00000574226 USP16Q9Y5T5 823 aa21.74■■□□□ 1.07
TVP23B-206ENST00000574226 NRXN2Q9P2S2 1712 aa21.73■■□□□ 1.07
TVP23B-206ENST00000574226 RGL2O15211 777 aa21.73■■□□□ 1.07
TVP23B-206ENST00000574226 DPEP1P16444 411 aa21.73■■□□□ 1.07
TVP23B-206ENST00000574226 PRKRIP1Q9H875 184 aaPredicted RBP21.73■■□□□ 1.07
TVP23B-206ENST00000574226 PIM2Q9P1W9 311 aa21.73■■□□□ 1.07
TVP23B-206ENST00000574226 ZNF330Q9Y3S2 320 aaPredicted RBP21.73■■□□□ 1.07
TVP23B-206ENST00000574226 BRCA1P38398 1863 aaKnown RBP21.73■■□□□ 1.07
TVP23B-206ENST00000574226 SCN7AQ01118 1682 aa21.72■■□□□ 1.07
TVP23B-206ENST00000574226 AFDNP55196 1824 aaKnown RBP21.72■■□□□ 1.07
TVP23B-206ENST00000574226 BABAM1Q9NWV8 329 aa21.72■■□□□ 1.07
TVP23B-206ENST00000574226 BCS1LQ9Y276 419 aa21.72■■□□□ 1.07
TVP23B-206ENST00000574226 KDM3BQ7LBC6 1761 aa21.71■■□□□ 1.07
TVP23B-206ENST00000574226 SERPINB2P05120 415 aa21.71■■□□□ 1.07
TVP23B-206ENST00000574226 RIPK4P57078 832 aa21.71■■□□□ 1.07
TVP23B-206ENST00000574226 PDZRN3Q9UPQ7 1066 aa21.71■■□□□ 1.07
TVP23B-206ENST00000574226 TBC1D2BQ9UPU7 963 aa21.71■■□□□ 1.07
TVP23B-206ENST00000574226 CLEC4GQ6UXB4 293 aa21.7■■□□□ 1.06
TVP23B-206ENST00000574226 ZNF652Q9Y2D9 606 aa21.7■■□□□ 1.06
TVP23B-206ENST00000574226 ARFGEF1Q9Y6D6 1849 aa21.7■■□□□ 1.06
TVP23B-206ENST00000574226 LAMB4A4D0S4 1761 aa21.69■■□□□ 1.06
TVP23B-206ENST00000574226 KCNA3P22001 575 aa21.69■■□□□ 1.06
TVP23B-206ENST00000574226 TMPOP42166 694 aaKnown RBP21.69■■□□□ 1.06
TVP23B-206ENST00000574226 DZIP3Q86Y13 1208 aaKnown RBP21.69■■□□□ 1.06
TVP23B-206ENST00000574226 RUNDC1Q96C34 613 aa21.69■■□□□ 1.06
TVP23B-206ENST00000574226 CARMIL3Q8ND23 1372 aa21.69■■□□□ 1.06
TVP23B-206ENST00000574226 CAMTA2O94983 1202 aa21.68■■□□□ 1.06
TVP23B-206ENST00000574226 DALRD3Q5D0E6 543 aaKnown RBP21.68■■□□□ 1.06
TVP23B-206ENST00000574226 SETDB2Q96T68 719 aa21.68■■□□□ 1.06
TVP23B-206ENST00000574226 MIS18AQ9NYP9 233 aa21.68■■□□□ 1.06
TVP23B-206ENST00000574226 WWC3Q9ULE0 1092 aa21.68■■□□□ 1.06
TVP23B-206ENST00000574226 GIGYF1O75420 1035 aaPredicted RBP21.67■■□□□ 1.06
TVP23B-206ENST00000574226 EIF4A1P60842 406 aaKnown RBP21.67■■□□□ 1.06
TVP23B-206ENST00000574226 BCORQ6W2J9 1755 aa21.66■■□□□ 1.06
TVP23B-206ENST00000574226 PRAMEF22A3QJZ6 481 aa21.66■■□□□ 1.06
TVP23B-206ENST00000574226 TBC1D9BQ66K14 1250 aa21.66■■□□□ 1.06
TVP23B-206ENST00000574226 BICDL1Q6ZP65 573 aa21.66■■□□□ 1.06
TVP23B-206ENST00000574226 THUMPD2Q9BTF0 503 aaKnown RBP21.65■■□□□ 1.06
TVP23B-206ENST00000574226 TSPYL4Q9UJ04 414 aa21.65■■□□□ 1.06
TVP23B-206ENST00000574226 ADCY9O60503 1353 aa21.64■■□□□ 1.06
TVP23B-206ENST00000574226 ERBB4Q15303 1308 aa21.64■■□□□ 1.05
TVP23B-206ENST00000574226 BRIP1Q9BX63 1249 aa21.64■■□□□ 1.05
TVP23B-206ENST00000574226 NBPF26B4DH59 902 aa21.63■■□□□ 1.05
TVP23B-206ENST00000574226 H0YIN7 160 aa21.63■■□□□ 1.05
TVP23B-206ENST00000574226 CHRNA5P30532 468 aa21.63■■□□□ 1.05
TVP23B-206ENST00000574226 PDE6BP35913 854 aa21.63■■□□□ 1.05
TVP23B-206ENST00000574226 NBPF10Q6P3W6 841 aaKnown RBP21.63■■□□□ 1.05
TVP23B-206ENST00000574226 ARHGAP27Q6ZUM4 889 aa21.63■■□□□ 1.05
TVP23B-206ENST00000574226 NBPF15Q8N660 670 aa21.63■■□□□ 1.05
TVP23B-206ENST00000574226 ADAMTS8Q9UP79 889 aa21.63■■□□□ 1.05
TVP23B-206ENST00000574226 ATP10DQ9P241 1426 aa21.63■■□□□ 1.05
TVP23B-206ENST00000574226 DLEC1Q9Y238 1755 aa21.62■■□□□ 1.05
TVP23B-206ENST00000574226 NPHP1O15259 732 aa21.62■■□□□ 1.05
TVP23B-206ENST00000574226 CNBD1Q8NA66 436 aa21.62■■□□□ 1.05
TVP23B-206ENST00000574226 ST5P78524 1137 aa21.61■■□□□ 1.05
TVP23B-206ENST00000574226 PIP4K2AP48426 406 aaPredicted RBP21.6■■□□□ 1.05
TVP23B-206ENST00000574226 PRR5LQ6MZQ0 368 aa21.6■■□□□ 1.05
TVP23B-206ENST00000574226 C2CD5Q86YS7 1000 aa21.6■■□□□ 1.05
TVP23B-206ENST00000574226 CCDC146Q8IYE0 955 aa21.6■■□□□ 1.05
TVP23B-206ENST00000574226 TTLL6Q8N841 843 aa21.6■■□□□ 1.05
TVP23B-206ENST00000574226 ERVV-1B6SEH8 477 aa21.59■■□□□ 1.05
TVP23B-206ENST00000574226 GPBP1L1Q9HC44 474 aaPredicted RBP21.59■■□□□ 1.05
TVP23B-206ENST00000574226 NEUROD2Q15784 382 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms