RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 STK32BQ9NY57 414 aa8.68□□□□□ -1.02
PRPF8-210ENST00000574217 MYH14Q7Z406 1995 aaKnown RBP8.68□□□□□ -1.02
PRPF8-210ENST00000574217 HOXD11P31277 338 aaPredicted RBP8.67□□□□□ -1.02
PRPF8-210ENST00000574217 UBR3Q6ZT12 1888 aa8.67□□□□□ -1.02
PRPF8-210ENST00000574217 DNAJC10Q8IXB1 793 aa8.67□□□□□ -1.02
PRPF8-210ENST00000574217 ZNF496Q96IT1 587 aaPredicted RBP8.67□□□□□ -1.02
PRPF8-210ENST00000574217 CASZ1Q86V15 1759 aa8.66□□□□□ -1.02
PRPF8-210ENST00000574217 HEG1Q9ULI3 1381 aa8.66□□□□□ -1.02
PRPF8-210ENST00000574217 CENPBP07199 599 aaPredicted RBP8.66□□□□□ -1.02
PRPF8-210ENST00000574217 FMNL2Q96PY5 1086 aa8.66□□□□□ -1.02
PRPF8-210ENST00000574217 EIF4A1P60842 406 aaKnown RBP8.65□□□□□ -1.02
PRPF8-210ENST00000574217 EXOSC9Q06265 439 aaKnown RBP8.65□□□□□ -1.02
PRPF8-210ENST00000574217 SMIM5Q71RC9 77 aa8.65□□□□□ -1.02
PRPF8-210ENST00000574217 VSIG10Q8N0Z9 540 aa8.65□□□□□ -1.02
PRPF8-210ENST00000574217 AK7Q96M32 723 aa8.65□□□□□ -1.02
PRPF8-210ENST00000574217 PDGFDQ9GZP0 370 aaPredicted RBP8.65□□□□□ -1.02
PRPF8-210ENST00000574217 TFCP2L1Q9NZI6 479 aa8.65□□□□□ -1.02
PRPF8-210ENST00000574217 LAMB4A4D0S4 1761 aa8.65□□□□□ -1.02
PRPF8-210ENST00000574217 PNPLA7Q6ZV29 1317 aa8.64□□□□□ -1.03
PRPF8-210ENST00000574217 CNTNAP4Q9C0A0 1308 aa8.64□□□□□ -1.03
PRPF8-210ENST00000574217 PRAMEF22A3QJZ6 481 aa8.64□□□□□ -1.03
PRPF8-210ENST00000574217 CT47B1P0C2W7 299 aaPredicted RBP8.64□□□□□ -1.03
PRPF8-210ENST00000574217 CYP19A1P11511 503 aaPredicted RBP8.64□□□□□ -1.03
PRPF8-210ENST00000574217 TWISTNBQ3B726 338 aaPredicted RBP8.64□□□□□ -1.03
PRPF8-210ENST00000574217 AMIGO3Q86WK7 504 aa8.64□□□□□ -1.03
PRPF8-210ENST00000574217 SOS1Q07889 1333 aaPredicted RBP8.63□□□□□ -1.03
PRPF8-210ENST00000574217 ELL2O00472 640 aaPredicted RBP8.63□□□□□ -1.03
PRPF8-210ENST00000574217 GNPATO15228 680 aa8.63□□□□□ -1.03
PRPF8-210ENST00000574217 PHF14O94880 888 aa8.63□□□□□ -1.03
PRPF8-210ENST00000574217 HOXB7P09629 217 aa8.63□□□□□ -1.03
PRPF8-210ENST00000574217 SNRPA1P09661 255 aaKnown RBP8.63□□□□□ -1.03
PRPF8-210ENST00000574217 HMGB2P26583 209 aaKnown RBP8.63□□□□□ -1.03
PRPF8-210ENST00000574217 CRKLP46109 303 aaKnown RBP8.63□□□□□ -1.03
PRPF8-210ENST00000574217 KRT24Q2M2I5 525 aa8.63□□□□□ -1.03
PRPF8-210ENST00000574217 RC3H1Q5TC82 1133 aaKnown RBP8.63□□□□□ -1.03
PRPF8-210ENST00000574217 INTS5Q6P9B9 1019 aaKnown RBP8.63□□□□□ -1.03
PRPF8-210ENST00000574217 TSPYL6Q8N831 410 aa8.63□□□□□ -1.03
PRPF8-210ENST00000574217 C8orf58Q8NAV2 365 aa8.63□□□□□ -1.03
PRPF8-210ENST00000574217 USP16Q9Y5T5 823 aa8.63□□□□□ -1.03
PRPF8-210ENST00000574217 C4AP0C0L4 1744 aa8.63□□□□□ -1.03
PRPF8-210ENST00000574217 GIGYF1O75420 1035 aaPredicted RBP8.62□□□□□ -1.03
PRPF8-210ENST00000574217 RPS6KA4O75676 772 aa8.62□□□□□ -1.03
PRPF8-210ENST00000574217 COL23A1Q86Y22 540 aaPredicted RBP8.62□□□□□ -1.03
PRPF8-210ENST00000574217 ZNF428Q96B54 188 aa8.62□□□□□ -1.03
PRPF8-210ENST00000574217 TEX13AQ9BXU3 409 aaPredicted RBP8.62□□□□□ -1.03
PRPF8-210ENST00000574217 CHMP4AQ9BY43 222 aa8.62□□□□□ -1.03
PRPF8-210ENST00000574217 CCDC87Q9NVE4 849 aa8.62□□□□□ -1.03
PRPF8-210ENST00000574217 ZBTB1Q9Y2K1 713 aa8.62□□□□□ -1.03
PRPF8-210ENST00000574217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.61□□□□□ -1.03
PRPF8-210ENST00000574217 VAMP4O75379 141 aa8.61□□□□□ -1.03
PRPF8-210ENST00000574217 ZBTB7AO95365 584 aa8.61□□□□□ -1.03
PRPF8-210ENST00000574217 STARD3NLO95772 234 aa8.61□□□□□ -1.03
PRPF8-210ENST00000574217 A1BGP04217 495 aa8.61□□□□□ -1.03
PRPF8-210ENST00000574217 CANXP27824 592 aaKnown RBP8.61□□□□□ -1.03
PRPF8-210ENST00000574217 SSFA2P28290 1259 aa8.61□□□□□ -1.03
PRPF8-210ENST00000574217 FLAD1Q8NFF5 587 aa8.61□□□□□ -1.03
PRPF8-210ENST00000574217 RTCBQ9Y3I0 505 aaKnown RBP8.61□□□□□ -1.03
PRPF8-210ENST00000574217 COL24A1Q17RW2 1714 aa8.6□□□□□ -1.03
PRPF8-210ENST00000574217 EIF2S2P20042 333 aaKnown RBP8.6□□□□□ -1.03
PRPF8-210ENST00000574217 PIP4K2AP48426 406 aaPredicted RBP8.6□□□□□ -1.03
PRPF8-210ENST00000574217 TRAPPC3LQ5T215 181 aa8.6□□□□□ -1.03
PRPF8-210ENST00000574217 HDGFL1Q5TGJ6 251 aa8.6□□□□□ -1.03
PRPF8-210ENST00000574217 CCDC30Q5VVM6 783 aa8.6□□□□□ -1.03
PRPF8-210ENST00000574217 ARHGEF1Q92888 912 aaKnown RBP8.6□□□□□ -1.03
PRPF8-210ENST00000574217 RCAN3Q9UKA8 241 aa8.6□□□□□ -1.03
PRPF8-210ENST00000574217 ATF5Q9Y2D1 282 aaPredicted RBP8.6□□□□□ -1.03
PRPF8-210ENST00000574217 RARSP54136 660 aaKnown RBP8.59□□□□□ -1.03
PRPF8-210ENST00000574217 ALDH1L2Q3SY69 923 aa8.59□□□□□ -1.03
PRPF8-210ENST00000574217 SLC16A10Q8TF71 515 aa8.59□□□□□ -1.03
PRPF8-210ENST00000574217 NECTIN2Q92692 538 aa8.59□□□□□ -1.03
PRPF8-210ENST00000574217 STK31Q9BXU1 1019 aa8.59□□□□□ -1.03
PRPF8-210ENST00000574217 SMC4Q9NTJ3 1288 aa8.59□□□□□ -1.03
PRPF8-210ENST00000574217 COL15A1P39059 1388 aa8.59□□□□□ -1.03
PRPF8-210ENST00000574217 LRP5O75197 1615 aa8.58□□□□□ -1.04
PRPF8-210ENST00000574217 NBPF26B4DH59 902 aa8.58□□□□□ -1.04
PRPF8-210ENST00000574217 RFC4P35249 363 aa8.58□□□□□ -1.04
PRPF8-210ENST00000574217 IL6STP40189 918 aaPredicted RBP8.58□□□□□ -1.04
PRPF8-210ENST00000574217 EIF5P55010 431 aaKnown RBP8.58□□□□□ -1.04
PRPF8-210ENST00000574217 MSL1Q68DK7 614 aa8.58□□□□□ -1.04
PRPF8-210ENST00000574217 NBPF10Q6P3W6 841 aaKnown RBP8.58□□□□□ -1.04
PRPF8-210ENST00000574217 NBPF15Q8N660 670 aa8.58□□□□□ -1.04
PRPF8-210ENST00000574217 SSH1Q8WYL5 1049 aa8.58□□□□□ -1.04
PRPF8-210ENST00000574217 BCL2L13Q9BXK5 485 aa8.58□□□□□ -1.04
PRPF8-210ENST00000574217 MTFR1LQ9H019 292 aa8.58□□□□□ -1.04
PRPF8-210ENST00000574217 DBF4Q9UBU7 674 aaPredicted RBP8.58□□□□□ -1.04
PRPF8-210ENST00000574217 SRP68Q9UHB9 627 aaKnown RBP8.58□□□□□ -1.04
PRPF8-210ENST00000574217 ZNF330Q9Y3S2 320 aaPredicted RBP8.58□□□□□ -1.04
PRPF8-210ENST00000574217 ERBB4Q15303 1308 aa8.57□□□□□ -1.04
PRPF8-210ENST00000574217 TCERG1O14776 1098 aaKnown RBP8.57□□□□□ -1.04
PRPF8-210ENST00000574217 SLC4A2P04920 1241 aa8.57□□□□□ -1.04
PRPF8-210ENST00000574217 SPON1Q9HCB6 807 aa8.57□□□□□ -1.04
PRPF8-210ENST00000574217 CHPF2Q9P2E5 772 aa8.57□□□□□ -1.04
PRPF8-210ENST00000574217 BCORQ6W2J9 1755 aa8.57□□□□□ -1.04
PRPF8-210ENST00000574217 KIF16BQ96L93 1317 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 USP42Q9H9J4 1324 aaKnown RBP8.56□□□□□ -1.04
PRPF8-210ENST00000574217 SCN7AQ01118 1682 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 BCAR3O75815 825 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 ANXA1P04083 346 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 GYS1P13807 737 aa8.56□□□□□ -1.04
PRPF8-210ENST00000574217 MYL6BP14649 208 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms