RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.33□□□□□ -0.6
KLHDC4-220ENST00000568338 CENPBP07199 599 aaPredicted RBP11.33□□□□□ -0.6
KLHDC4-220ENST00000568338 HSPA1AP0DMV8 641 aaKnown RBP11.33□□□□□ -0.6
KLHDC4-220ENST00000568338 HSPA1BP0DMV9 641 aaKnown RBP11.33□□□□□ -0.6
KLHDC4-220ENST00000568338 EIF4A2Q14240 407 aaKnown RBP11.33□□□□□ -0.6
KLHDC4-220ENST00000568338 PNNQ9H307 717 aaKnown RBP11.33□□□□□ -0.6
KLHDC4-220ENST00000568338 MEGF6O75095 1541 aa11.33□□□□□ -0.6
KLHDC4-220ENST00000568338 ZBED9Q6R2W3 1325 aa11.33□□□□□ -0.6
KLHDC4-220ENST00000568338 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
KLHDC4-220ENST00000568338 SSFA2P28290 1259 aa11.32□□□□□ -0.6
KLHDC4-220ENST00000568338 TGFB2P61812 414 aa11.31□□□□□ -0.6
KLHDC4-220ENST00000568338 SMC1BQ8NDV3 1235 aa11.31□□□□□ -0.6
KLHDC4-220ENST00000568338 SMARCC1Q92922 1105 aaPredicted RBP11.31□□□□□ -0.6
KLHDC4-220ENST00000568338 RUNDC1Q96C34 613 aa11.31□□□□□ -0.6
KLHDC4-220ENST00000568338 TOGARAM1Q9Y4F4 1720 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 FCHSD2O94868 740 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 NEFMP07197 916 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 MMP10P09238 476 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 C9orf131Q5VYM1 1079 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 MPRIPQ6WCQ1 1025 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 AMIGO3Q86WK7 504 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 CCDC146Q8IYE0 955 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 NGEFQ8N5V2 710 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 RAPGEF4Q8WZA2 1011 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 MAPK8IP3Q9UPT6 1336 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 KCPQ6ZWJ8 1503 aa11.3□□□□□ -0.6
KLHDC4-220ENST00000568338 C10orf71Q711Q0 1435 aa11.29□□□□□ -0.6
KLHDC4-220ENST00000568338 A0A0G2JLW4 131 aa11.29□□□□□ -0.6
KLHDC4-220ENST00000568338 MAP3K13O43283 966 aa11.29□□□□□ -0.6
KLHDC4-220ENST00000568338 SMIM5Q71RC9 77 aa11.29□□□□□ -0.6
KLHDC4-220ENST00000568338 RSPH6AQ9H0K4 717 aa11.29□□□□□ -0.6
KLHDC4-220ENST00000568338 PCDH11XQ9BZA7 1347 aa11.29□□□□□ -0.6
KLHDC4-220ENST00000568338 PCDH11YQ9BZA8 1340 aa11.29□□□□□ -0.6
KLHDC4-220ENST00000568338 KDRP35968 1356 aa11.28□□□□□ -0.6
KLHDC4-220ENST00000568338 RGPD2P0DJD1 1756 aa11.28□□□□□ -0.6
KLHDC4-220ENST00000568338 HMOX1P09601 288 aa11.28□□□□□ -0.6
KLHDC4-220ENST00000568338 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
KLHDC4-220ENST00000568338 PLEKHF1Q96S99 279 aa11.28□□□□□ -0.6
KLHDC4-220ENST00000568338 RRAGCQ9HB90 399 aa11.28□□□□□ -0.6
KLHDC4-220ENST00000568338 TAF1LQ8IZX4 1826 aa11.28□□□□□ -0.6
KLHDC4-220ENST00000568338 APAF1O14727 1248 aa11.27□□□□□ -0.61
KLHDC4-220ENST00000568338 GNPATO15228 680 aa11.27□□□□□ -0.61
KLHDC4-220ENST00000568338 PRKAR2BP31323 418 aa11.27□□□□□ -0.61
KLHDC4-220ENST00000568338 SULT6B1Q6IMI4 303 aa11.27□□□□□ -0.61
KLHDC4-220ENST00000568338 EYA1Q99502 592 aa11.27□□□□□ -0.61
KLHDC4-220ENST00000568338 RNF181Q9P0P0 153 aa11.27□□□□□ -0.61
KLHDC4-220ENST00000568338 KAT6BQ8WYB5 2073 aa11.27□□□□□ -0.61
KLHDC4-220ENST00000568338 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
KLHDC4-220ENST00000568338 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
KLHDC4-220ENST00000568338 DCAF8Q5TAQ9 597 aa11.26□□□□□ -0.61
KLHDC4-220ENST00000568338 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
KLHDC4-220ENST00000568338 CCDC87Q9NVE4 849 aa11.26□□□□□ -0.61
KLHDC4-220ENST00000568338 PKD1L3Q7Z443 1732 aa11.26□□□□□ -0.61
KLHDC4-220ENST00000568338 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
KLHDC4-220ENST00000568338 PCNTO95613 3336 aa11.25□□□□□ -0.61
KLHDC4-220ENST00000568338 DPEP1P16444 411 aa11.25□□□□□ -0.61
KLHDC4-220ENST00000568338 USHBP1Q8N6Y0 703 aa11.25□□□□□ -0.61
KLHDC4-220ENST00000568338 LINC00116Q8NCU8 138 aa11.25□□□□□ -0.61
KLHDC4-220ENST00000568338 UBR3Q6ZT12 1888 aa11.25□□□□□ -0.61
KLHDC4-220ENST00000568338 N4BP2Q86UW6 1770 aaPredicted RBP11.24□□□□□ -0.61
KLHDC4-220ENST00000568338 LOC102724428A0A0B4J2F2 783 aa11.24□□□□□ -0.61
KLHDC4-220ENST00000568338 SIK1P57059 783 aa11.24□□□□□ -0.61
KLHDC4-220ENST00000568338 NBPF6Q5VWK0 638 aa11.24□□□□□ -0.61
KLHDC4-220ENST00000568338 AEBP1Q8IUX7 1158 aa11.24□□□□□ -0.61
KLHDC4-220ENST00000568338 NLGN1Q8N2Q7 840 aa11.24□□□□□ -0.61
KLHDC4-220ENST00000568338 NBPF4Q96M43 638 aa11.24□□□□□ -0.61
KLHDC4-220ENST00000568338 SALL2Q9Y467 1007 aaPredicted RBP11.24□□□□□ -0.61
KLHDC4-220ENST00000568338 KIF13BQ9NQT8 1826 aa11.23□□□□□ -0.61
KLHDC4-220ENST00000568338 DLG5Q8TDM6 1919 aa11.23□□□□□ -0.61
KLHDC4-220ENST00000568338 TMPOP42166 694 aaKnown RBP11.23□□□□□ -0.61
KLHDC4-220ENST00000568338 CCDC27Q2M243 656 aa11.23□□□□□ -0.61
KLHDC4-220ENST00000568338 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
KLHDC4-220ENST00000568338 PCDH10Q9P2E7 1040 aa11.23□□□□□ -0.61
KLHDC4-220ENST00000568338 PARP3Q9Y6F1 533 aa11.23□□□□□ -0.61
KLHDC4-220ENST00000568338 ZNF521Q96K83 1311 aa11.23□□□□□ -0.61
KLHDC4-220ENST00000568338 NFE2L2Q16236 605 aa11.22□□□□□ -0.61
KLHDC4-220ENST00000568338 DALRD3Q5D0E6 543 aaKnown RBP11.22□□□□□ -0.61
KLHDC4-220ENST00000568338 PIGBQ92521 554 aa11.22□□□□□ -0.61
KLHDC4-220ENST00000568338 RRP7AQ9Y3A4 280 aaKnown RBP11.22□□□□□ -0.61
KLHDC4-220ENST00000568338 VEGFAP15692 232 aaPredicted RBP11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 ATP6V1AP38606 617 aa11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 GSE1Q14687 1217 aa11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 NEUROD2Q15784 382 aa11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 TRAPPC3LQ5T215 181 aa11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 PHACTR3Q96KR7 559 aa11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 RTCBQ9Y3I0 505 aaKnown RBP11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 PCDHB13Q9Y5F0 798 aa11.21□□□□□ -0.61
KLHDC4-220ENST00000568338 C4AP0C0L4 1744 aa11.21□□□□□ -0.62
KLHDC4-220ENST00000568338 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
KLHDC4-220ENST00000568338 CYP27B1O15528 508 aa11.2□□□□□ -0.62
KLHDC4-220ENST00000568338 RIPK4P57078 832 aa11.2□□□□□ -0.62
KLHDC4-220ENST00000568338 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
KLHDC4-220ENST00000568338 ITPK1Q13572 414 aa11.2□□□□□ -0.62
KLHDC4-220ENST00000568338 WWC1Q8IX03 1113 aa11.2□□□□□ -0.62
KLHDC4-220ENST00000568338 GAS2L2Q8NHY3 880 aa11.2□□□□□ -0.62
KLHDC4-220ENST00000568338 TMOD3Q9NYL9 352 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms