RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 CHMP4AQ9BY43 222 aa26.36■■□□□ 1.81
RNF40-210ENST00000566811 MYH16Q9H6N6 1097 aa26.36■■□□□ 1.81
RNF40-210ENST00000566811 MBIPQ9NS73 344 aa26.36■■□□□ 1.81
RNF40-210ENST00000566811 SALL2Q9Y467 1007 aaPredicted RBP26.36■■□□□ 1.81
RNF40-210ENST00000566811 ZBTB7AO95365 584 aa26.35■■□□□ 1.81
RNF40-210ENST00000566811 KCNQ4P56696 695 aa26.35■■□□□ 1.81
RNF40-210ENST00000566811 DNAJC10Q8IXB1 793 aa26.35■■□□□ 1.81
RNF40-210ENST00000566811 GIGYF1O75420 1035 aaPredicted RBP26.34■■□□□ 1.81
RNF40-210ENST00000566811 CYP19A1P11511 503 aaPredicted RBP26.34■■□□□ 1.81
RNF40-210ENST00000566811 SSFA2P28290 1259 aa26.34■■□□□ 1.81
RNF40-210ENST00000566811 ADRA2BP18089 450 aa26.33■■□□□ 1.81
RNF40-210ENST00000566811 CRKLP46109 303 aaKnown RBP26.33■■□□□ 1.81
RNF40-210ENST00000566811 GOLGA2Q08379 1002 aa26.33■■□□□ 1.81
RNF40-210ENST00000566811 ZNF827Q17R98 1081 aa26.33■■□□□ 1.81
RNF40-210ENST00000566811 CCDC87Q9NVE4 849 aa26.33■■□□□ 1.81
RNF40-210ENST00000566811 TFCP2L1Q9NZI6 479 aa26.33■■□□□ 1.81
RNF40-210ENST00000566811 C4AP0C0L4 1744 aa26.33■■□□□ 1.81
RNF40-210ENST00000566811 PTGER2P43116 358 aa26.32■■□□□ 1.8
RNF40-210ENST00000566811 ATF5Q9Y2D1 282 aaPredicted RBP26.32■■□□□ 1.8
RNF40-210ENST00000566811 ERBB4Q15303 1308 aa26.32■■□□□ 1.8
RNF40-210ENST00000566811 E9PSI1 815 aa26.31■■□□□ 1.8
RNF40-210ENST00000566811 HNRNPUQ00839 825 aaKnown RBP eCLIP26.31■■□□□ 1.8
RNF40-210ENST00000566811 GNPATO15228 680 aa26.3■■□□□ 1.8
RNF40-210ENST00000566811 RTCBQ9Y3I0 505 aaKnown RBP26.3■■□□□ 1.8
RNF40-210ENST00000566811 CACNA1FO60840 1977 aa26.29■■□□□ 1.8
RNF40-210ENST00000566811 SENP3-EIF4A1A0A087X0R7 540 aa26.29■■□□□ 1.8
RNF40-210ENST00000566811 FANCIQ9NVI1 1328 aa26.29■■□□□ 1.8
RNF40-210ENST00000566811 RPS6KA4O75676 772 aa26.28■■□□□ 1.8
RNF40-210ENST00000566811 ZBED9Q6R2W3 1325 aa26.28■■□□□ 1.8
RNF40-210ENST00000566811 COL24A1Q17RW2 1714 aa26.26■■□□□ 1.79
RNF40-210ENST00000566811 PNPLA7Q6ZV29 1317 aa26.26■■□□□ 1.79
RNF40-210ENST00000566811 INTS5Q6P9B9 1019 aaKnown RBP26.26■■□□□ 1.79
RNF40-210ENST00000566811 SCN7AQ01118 1682 aa26.25■■□□□ 1.79
RNF40-210ENST00000566811 IL6STP40189 918 aaPredicted RBP26.25■■□□□ 1.79
RNF40-210ENST00000566811 SLC16A10Q8TF71 515 aa26.25■■□□□ 1.79
RNF40-210ENST00000566811 USP16Q9Y5T5 823 aa26.25■■□□□ 1.79
RNF40-210ENST00000566811 COL15A1P39059 1388 aa26.24■■□□□ 1.79
RNF40-210ENST00000566811 NPM2Q86SE8 214 aaKnown RBP26.24■■□□□ 1.79
RNF40-210ENST00000566811 TSR2Q969E8 191 aaKnown RBP26.24■■□□□ 1.79
RNF40-210ENST00000566811 ZBTB1Q9Y2K1 713 aa26.24■■□□□ 1.79
RNF40-210ENST00000566811 BCORQ6W2J9 1755 aa26.24■■□□□ 1.79
RNF40-210ENST00000566811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.23■■□□□ 1.79
RNF40-210ENST00000566811 A0A087WZG4 1122 aa26.22■■□□□ 1.79
RNF40-210ENST00000566811 PRAMEF22A3QJZ6 481 aa26.22■■□□□ 1.79
RNF40-210ENST00000566811 TRAPPC3LQ5T215 181 aa26.22■■□□□ 1.79
RNF40-210ENST00000566811 DUSP27Q5VZP5 1158 aa26.22■■□□□ 1.79
RNF40-210ENST00000566811 SYT17Q9BSW7 474 aa26.22■■□□□ 1.79
RNF40-210ENST00000566811 FHDC1Q9C0D6 1143 aaPredicted RBP26.22■■□□□ 1.79
RNF40-210ENST00000566811 SLFN5Q08AF3 891 aa26.21■■□□□ 1.79
RNF40-210ENST00000566811 SGIP1Q9BQI5 828 aa26.21■■□□□ 1.79
RNF40-210ENST00000566811 EIF5P55010 431 aaKnown RBP26.2■■□□□ 1.78
RNF40-210ENST00000566811 HDGFL1Q5TGJ6 251 aa26.2■■□□□ 1.78
RNF40-210ENST00000566811 MTFR1LQ9H019 292 aa26.2■■□□□ 1.78
RNF40-210ENST00000566811 PHF14O94880 888 aa26.19■■□□□ 1.78
RNF40-210ENST00000566811 A1BGP04217 495 aa26.19■■□□□ 1.78
RNF40-210ENST00000566811 TWISTNBQ3B726 338 aaPredicted RBP26.19■■□□□ 1.78
RNF40-210ENST00000566811 SPINK5Q9NQ38 1064 aaPredicted RBP26.19■■□□□ 1.78
RNF40-210ENST00000566811 CANXP27824 592 aaKnown RBP26.18■■□□□ 1.78
RNF40-210ENST00000566811 KRT24Q2M2I5 525 aa26.18■■□□□ 1.78
RNF40-210ENST00000566811 RGL2O15211 777 aa26.17■■□□□ 1.78
RNF40-210ENST00000566811 RFC4P35249 363 aa26.17■■□□□ 1.78
RNF40-210ENST00000566811 CCDC30Q5VVM6 783 aa26.17■■□□□ 1.78
RNF40-210ENST00000566811 COL23A1Q86Y22 540 aaPredicted RBP26.17■■□□□ 1.78
RNF40-210ENST00000566811 TRMT2AQ8IZ69 625 aaKnown RBP26.17■■□□□ 1.78
RNF40-210ENST00000566811 DBF4Q9UBU7 674 aaPredicted RBP26.17■■□□□ 1.78
RNF40-210ENST00000566811 EIF2S2P20042 333 aaKnown RBP26.16■■□□□ 1.78
RNF40-210ENST00000566811 C8orf58Q8NAV2 365 aa26.16■■□□□ 1.78
RNF40-210ENST00000566811 ZNF784Q8NCA9 323 aaPredicted RBP26.16■■□□□ 1.78
RNF40-210ENST00000566811 MSH5O43196 834 aa26.15■■□□□ 1.78
RNF40-210ENST00000566811 CT47B1P0C2W7 299 aaPredicted RBP26.15■■□□□ 1.78
RNF40-210ENST00000566811 ARHGEF1Q92888 912 aaKnown RBP26.15■■□□□ 1.78
RNF40-210ENST00000566811 ZNF428Q96B54 188 aa26.15■■□□□ 1.78
RNF40-210ENST00000566811 DDX21Q9NR30 783 aaKnown RBP eCLIP26.15■■□□□ 1.78
RNF40-210ENST00000566811 USP42Q9H9J4 1324 aaKnown RBP26.14■■□□□ 1.78
RNF40-210ENST00000566811 EXOSC9Q06265 439 aaKnown RBP26.14■■□□□ 1.78
RNF40-210ENST00000566811 AMIGO3Q86WK7 504 aa26.14■■□□□ 1.78
RNF40-210ENST00000566811 NBPF26B4DH59 902 aa26.13■■□□□ 1.77
RNF40-210ENST00000566811 ZPR1O75312 459 aa26.13■■□□□ 1.77
RNF40-210ENST00000566811 NBPF10Q6P3W6 841 aaKnown RBP26.13■■□□□ 1.77
RNF40-210ENST00000566811 NBPF15Q8N660 670 aa26.13■■□□□ 1.77
RNF40-210ENST00000566811 STK31Q9BXU1 1019 aa26.12■■□□□ 1.77
RNF40-210ENST00000566811 HYPKQ9NX55 129 aa26.12■■□□□ 1.77
RNF40-210ENST00000566811 NARFQ9UHQ1 456 aa26.12■■□□□ 1.77
RNF40-210ENST00000566811 UTRNP46939 3433 aa26.12■■□□□ 1.77
RNF40-210ENST00000566811 TSPYL6Q8N831 410 aa26.11■■□□□ 1.77
RNF40-210ENST00000566811 ARXQ96QS3 562 aa26.11■■□□□ 1.77
RNF40-210ENST00000566811 ELL2O00472 640 aaPredicted RBP26.1■■□□□ 1.77
RNF40-210ENST00000566811 PDIA6Q15084 440 aa26.1■■□□□ 1.77
RNF40-210ENST00000566811 CDCA7LQ96GN5 454 aa26.1■■□□□ 1.77
RNF40-210ENST00000566811 CHPF2Q9P2E5 772 aa26.1■■□□□ 1.77
RNF40-210ENST00000566811 ZNF330Q9Y3S2 320 aaPredicted RBP26.1■■□□□ 1.77
RNF40-210ENST00000566811 NUP98P52948 1817 aa26.09■■□□□ 1.77
RNF40-210ENST00000566811 VAMP4O75379 141 aa26.09■■□□□ 1.77
RNF40-210ENST00000566811 DZIP3Q86Y13 1208 aaKnown RBP26.09■■□□□ 1.77
RNF40-210ENST00000566811 NLGN1Q8N2Q7 840 aa26.09■■□□□ 1.77
RNF40-210ENST00000566811 ZNF652Q9Y2D9 606 aa26.09■■□□□ 1.77
RNF40-210ENST00000566811 ANKRD36CQ5JPF3 1778 aa26.09■■□□□ 1.77
RNF40-210ENST00000566811 MYL6BP14649 208 aa26.08■■□□□ 1.77
RNF40-210ENST00000566811 KIF6Q6ZMV9 814 aa26.08■■□□□ 1.77
RNF40-210ENST00000566811 CHD4Q14839 1912 aa26.08■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms