RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 ZPR1O75312 459 aa25.14■■□□□ 1.62
CPNE7-208ENST00000566398 NFE2L2Q16236 605 aa25.14■■□□□ 1.62
CPNE7-208ENST00000566398 SIPA1L3O60292 1781 aaPredicted RBP25.13■■□□□ 1.61
CPNE7-208ENST00000566398 C4AP0C0L4 1744 aa25.13■■□□□ 1.61
CPNE7-208ENST00000566398 KCNQ3O43525 872 aa25.13■■□□□ 1.61
CPNE7-208ENST00000566398 PARP3Q9Y6F1 533 aa25.13■■□□□ 1.61
CPNE7-208ENST00000566398 CANXP27824 592 aaKnown RBP25.12■■□□□ 1.61
CPNE7-208ENST00000566398 FKBP8Q14318 412 aa25.12■■□□□ 1.61
CPNE7-208ENST00000566398 YBX3P16989 372 aaKnown RBP eCLIP25.1■■□□□ 1.61
CPNE7-208ENST00000566398 USPL1Q5W0Q7 1092 aa25.1■■□□□ 1.61
CPNE7-208ENST00000566398 PRKRIP1Q9H875 184 aaPredicted RBP25.1■■□□□ 1.61
CPNE7-208ENST00000566398 C10orf71Q711Q0 1435 aa25.1■■□□□ 1.61
CPNE7-208ENST00000566398 GRIN3BO60391 1043 aa25.09■■□□□ 1.61
CPNE7-208ENST00000566398 TAF7Q15545 349 aaPredicted RBP25.09■■□□□ 1.61
CPNE7-208ENST00000566398 NARFQ9UHQ1 456 aa25.09■■□□□ 1.61
CPNE7-208ENST00000566398 A0A087WZG4 1122 aa25.07■■□□□ 1.6
CPNE7-208ENST00000566398 EIF5P55010 431 aaKnown RBP25.07■■□□□ 1.6
CPNE7-208ENST00000566398 WDR43Q15061 677 aaKnown RBP eCLIP25.07■■□□□ 1.6
CPNE7-208ENST00000566398 SNRPA1P09661 255 aaKnown RBP25.06■■□□□ 1.6
CPNE7-208ENST00000566398 DDR1Q08345 913 aa25.06■■□□□ 1.6
CPNE7-208ENST00000566398 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
CPNE7-208ENST00000566398 ZNF330Q9Y3S2 320 aaPredicted RBP25.06■■□□□ 1.6
CPNE7-208ENST00000566398 PXDNLA1KZ92 1463 aa25.05■■□□□ 1.6
CPNE7-208ENST00000566398 IL6STP40189 918 aaPredicted RBP25.05■■□□□ 1.6
CPNE7-208ENST00000566398 A1BGP04217 495 aa25.04■■□□□ 1.6
CPNE7-208ENST00000566398 TGFB2P61812 414 aa25.04■■□□□ 1.6
CPNE7-208ENST00000566398 NPM2Q86SE8 214 aaKnown RBP25.04■■□□□ 1.6
CPNE7-208ENST00000566398 THUMPD2Q9BTF0 503 aaKnown RBP25.04■■□□□ 1.6
CPNE7-208ENST00000566398 WWC3Q9ULE0 1092 aa25.04■■□□□ 1.6
CPNE7-208ENST00000566398 POLRMTO00411 1230 aaKnown RBP25.03■■□□□ 1.6
CPNE7-208ENST00000566398 MIS18AQ9NYP9 233 aa25.03■■□□□ 1.6
CPNE7-208ENST00000566398 PRAMEF22A3QJZ6 481 aa25.02■■□□□ 1.6
CPNE7-208ENST00000566398 TM4SF1P30408 202 aa25.02■■□□□ 1.6
CPNE7-208ENST00000566398 USP16Q9Y5T5 823 aa25.02■■□□□ 1.6
CPNE7-208ENST00000566398 RIPK4P57078 832 aa25.01■■□□□ 1.59
CPNE7-208ENST00000566398 LMOD3Q0VAK6 560 aa25.01■■□□□ 1.59
CPNE7-208ENST00000566398 NFIXQ14938 502 aa25.01■■□□□ 1.59
CPNE7-208ENST00000566398 BCL2L12Q9HB09 334 aa25.01■■□□□ 1.59
CPNE7-208ENST00000566398 TMPOP42166 694 aaKnown RBP25■■□□□ 1.59
CPNE7-208ENST00000566398 CCDC146Q8IYE0 955 aa25■■□□□ 1.59
CPNE7-208ENST00000566398 A0A0G2JLW4 131 aa24.99■■□□□ 1.59
CPNE7-208ENST00000566398 TBC1D2BQ9UPU7 963 aa24.98■■□□□ 1.59
CPNE7-208ENST00000566398 DPEP1P16444 411 aa24.97■■□□□ 1.59
CPNE7-208ENST00000566398 RUNDC1Q96C34 613 aa24.97■■□□□ 1.59
CPNE7-208ENST00000566398 ADAMTS8Q9UP79 889 aa24.97■■□□□ 1.59
CPNE7-208ENST00000566398 ZNF316A6NFI3 1004 aaPredicted RBP24.96■■□□□ 1.59
CPNE7-208ENST00000566398 PIP4K2AP48426 406 aaPredicted RBP24.96■■□□□ 1.59
CPNE7-208ENST00000566398 RRP7AQ9Y3A4 280 aaKnown RBP24.96■■□□□ 1.59
CPNE7-208ENST00000566398 KIF13BQ9NQT8 1826 aa24.96■■□□□ 1.59
CPNE7-208ENST00000566398 EIF4A1P60842 406 aaKnown RBP24.95■■□□□ 1.58
CPNE7-208ENST00000566398 BICDL1Q6ZP65 573 aa24.95■■□□□ 1.58
CPNE7-208ENST00000566398 DZIP3Q86Y13 1208 aaKnown RBP24.95■■□□□ 1.58
CPNE7-208ENST00000566398 ZNF784Q8NCA9 323 aaPredicted RBP24.95■■□□□ 1.58
CPNE7-208ENST00000566398 TSPYL4Q9UJ04 414 aa24.95■■□□□ 1.58
CPNE7-208ENST00000566398 CAMTA2O94983 1202 aa24.94■■□□□ 1.58
CPNE7-208ENST00000566398 SERPINB2P05120 415 aa24.94■■□□□ 1.58
CPNE7-208ENST00000566398 BCS1LQ9Y276 419 aa24.94■■□□□ 1.58
CPNE7-208ENST00000566398 GIGYF1O75420 1035 aaPredicted RBP24.93■■□□□ 1.58
CPNE7-208ENST00000566398 NEUROD2Q15784 382 aa24.93■■□□□ 1.58
CPNE7-208ENST00000566398 TBC1D9BQ66K14 1250 aa24.93■■□□□ 1.58
CPNE7-208ENST00000566398 SCN7AQ01118 1682 aa24.93■■□□□ 1.58
CPNE7-208ENST00000566398 DLG5Q8TDM6 1919 aa24.92■■□□□ 1.58
CPNE7-208ENST00000566398 KIAA1551Q9HCM1 1747 aa24.92■■□□□ 1.58
CPNE7-208ENST00000566398 KDM3BQ7LBC6 1761 aa24.91■■□□□ 1.58
CPNE7-208ENST00000566398 NBPF26B4DH59 902 aa24.91■■□□□ 1.58
CPNE7-208ENST00000566398 NBPF10Q6P3W6 841 aaKnown RBP24.91■■□□□ 1.58
CPNE7-208ENST00000566398 NBPF15Q8N660 670 aa24.91■■□□□ 1.58
CPNE7-208ENST00000566398 CARMIL3Q8ND23 1372 aa24.91■■□□□ 1.58
CPNE7-208ENST00000566398 KCNA3P22001 575 aa24.9■■□□□ 1.58
CPNE7-208ENST00000566398 BABAM1Q9NWV8 329 aa24.9■■□□□ 1.58
CPNE7-208ENST00000566398 PIM2Q9P1W9 311 aa24.9■■□□□ 1.58
CPNE7-208ENST00000566398 CHRNA5P30532 468 aa24.89■■□□□ 1.58
CPNE7-208ENST00000566398 ZNF652Q9Y2D9 606 aa24.89■■□□□ 1.58
CPNE7-208ENST00000566398 CHD4Q14839 1912 aa24.88■■□□□ 1.57
CPNE7-208ENST00000566398 SETDB2Q96T68 719 aa24.88■■□□□ 1.57
CPNE7-208ENST00000566398 DALRD3Q5D0E6 543 aaKnown RBP24.87■■□□□ 1.57
CPNE7-208ENST00000566398 TRIM35Q9UPQ4 493 aa24.87■■□□□ 1.57
CPNE7-208ENST00000566398 N4BP2Q86UW6 1770 aaPredicted RBP24.86■■□□□ 1.57
CPNE7-208ENST00000566398 CLEC4GQ6UXB4 293 aa24.86■■□□□ 1.57
CPNE7-208ENST00000566398 LAMB4A4D0S4 1761 aa24.85■■□□□ 1.57
CPNE7-208ENST00000566398 RGL2O15211 777 aa24.85■■□□□ 1.57
CPNE7-208ENST00000566398 NPHP1O15259 732 aa24.85■■□□□ 1.57
CPNE7-208ENST00000566398 NRXN2Q9P2S2 1712 aa24.85■■□□□ 1.57
CPNE7-208ENST00000566398 CNBD1Q8NA66 436 aa24.84■■□□□ 1.57
CPNE7-208ENST00000566398 ANP32CO43423 234 aa24.83■■□□□ 1.57
CPNE7-208ENST00000566398 PRR5LQ6MZQ0 368 aa24.83■■□□□ 1.57
CPNE7-208ENST00000566398 ERBB4Q15303 1308 aa24.83■■□□□ 1.56
CPNE7-208ENST00000566398 ARHGAP27Q6ZUM4 889 aa24.82■■□□□ 1.56
CPNE7-208ENST00000566398 C2CD5Q86YS7 1000 aa24.82■■□□□ 1.56
CPNE7-208ENST00000566398 NGEFQ8N5V2 710 aa24.82■■□□□ 1.56
CPNE7-208ENST00000566398 LAS1LQ9Y4W2 734 aaKnown RBP24.82■■□□□ 1.56
CPNE7-208ENST00000566398 BCORQ6W2J9 1755 aa24.82■■□□□ 1.56
CPNE7-208ENST00000566398 H0YIN7 160 aa24.81■■□□□ 1.56
CPNE7-208ENST00000566398 CHL1O00533 1208 aa24.81■■□□□ 1.56
CPNE7-208ENST00000566398 APAF1O14727 1248 aa24.81■■□□□ 1.56
CPNE7-208ENST00000566398 MYL6BP14649 208 aa24.81■■□□□ 1.56
CPNE7-208ENST00000566398 ST5P78524 1137 aa24.81■■□□□ 1.56
CPNE7-208ENST00000566398 BRIP1Q9BX63 1249 aa24.81■■□□□ 1.56
CPNE7-208ENST00000566398 ADCY9O60503 1353 aa24.8■■□□□ 1.56
CPNE7-208ENST00000566398 ATP10DQ9P241 1426 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms