RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 SLC39A6Q13433 755 aa15.3■□□□□ 0.04
FANCA-209ENST00000562424 SMIM5Q71RC9 77 aa15.3■□□□□ 0.04
FANCA-209ENST00000562424 C4AP0C0L4 1744 aa15.29■□□□□ 0.04
FANCA-209ENST00000562424 MSL1Q68DK7 614 aa15.28■□□□□ 0.04
FANCA-209ENST00000562424 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
FANCA-209ENST00000562424 PRKRIP1Q9H875 184 aaPredicted RBP15.28■□□□□ 0.04
FANCA-209ENST00000562424 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
FANCA-209ENST00000562424 RTCBQ9Y3I0 505 aaKnown RBP15.28■□□□□ 0.04
FANCA-209ENST00000562424 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.04
FANCA-209ENST00000562424 RPS6KA4O75676 772 aa15.27■□□□□ 0.04
FANCA-209ENST00000562424 NEFMP07197 916 aa15.27■□□□□ 0.04
FANCA-209ENST00000562424 CRKLP46109 303 aaKnown RBP15.27■□□□□ 0.04
FANCA-209ENST00000562424 RTF1Q92541 710 aaKnown RBP15.27■□□□□ 0.04
FANCA-209ENST00000562424 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.04
FANCA-209ENST00000562424 HTATSF1O43719 755 aaKnown RBP15.26■□□□□ 0.03
FANCA-209ENST00000562424 TRAPPC3LQ5T215 181 aa15.26■□□□□ 0.03
FANCA-209ENST00000562424 IFNLR1Q8IU57 520 aaPredicted RBP15.26■□□□□ 0.03
FANCA-209ENST00000562424 DNAJC10Q8IXB1 793 aa15.26■□□□□ 0.03
FANCA-209ENST00000562424 TTC5Q8N0Z6 440 aa15.26■□□□□ 0.03
FANCA-209ENST00000562424 VSIG10Q8N0Z9 540 aa15.26■□□□□ 0.03
FANCA-209ENST00000562424 ZNF790Q6PG37 636 aa15.25■□□□□ 0.03
FANCA-209ENST00000562424 MCM10Q7L590 875 aa15.25■□□□□ 0.03
FANCA-209ENST00000562424 PLCD3Q8N3E9 789 aa15.25■□□□□ 0.03
FANCA-209ENST00000562424 ZNF316A6NFI3 1004 aaPredicted RBP15.24■□□□□ 0.03
FANCA-209ENST00000562424 CYP19A1P11511 503 aaPredicted RBP15.24■□□□□ 0.03
FANCA-209ENST00000562424 INTS5Q6P9B9 1019 aaKnown RBP15.24■□□□□ 0.03
FANCA-209ENST00000562424 MIER1Q8N108 512 aa15.24■□□□□ 0.03
FANCA-209ENST00000562424 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
FANCA-209ENST00000562424 NLGN2Q8NFZ4 835 aa15.24■□□□□ 0.03
FANCA-209ENST00000562424 ARHGEF1Q92888 912 aaKnown RBP15.24■□□□□ 0.03
FANCA-209ENST00000562424 RTN4Q9NQC3 1192 aaKnown RBP15.24■□□□□ 0.03
FANCA-209ENST00000562424 CCDC87Q9NVE4 849 aa15.24■□□□□ 0.03
FANCA-209ENST00000562424 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
FANCA-209ENST00000562424 BTBD11A6QL63 1104 aa15.23■□□□□ 0.03
FANCA-209ENST00000562424 DCTN1Q14203 1278 aa15.23■□□□□ 0.03
FANCA-209ENST00000562424 NFE2L2Q16236 605 aa15.23■□□□□ 0.03
FANCA-209ENST00000562424 ZNF496Q96IT1 587 aaPredicted RBP15.23■□□□□ 0.03
FANCA-209ENST00000562424 HEG1Q9ULI3 1381 aa15.23■□□□□ 0.03
FANCA-209ENST00000562424 MAPK8IP3Q9UPT6 1336 aa15.22■□□□□ 0.03
FANCA-209ENST00000562424 RFC4P35249 363 aa15.22■□□□□ 0.03
FANCA-209ENST00000562424 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
FANCA-209ENST00000562424 GRIN3BO60391 1043 aa15.21■□□□□ 0.03
FANCA-209ENST00000562424 GIGYF1O75420 1035 aaPredicted RBP15.21■□□□□ 0.03
FANCA-209ENST00000562424 FMNL2Q96PY5 1086 aa15.21■□□□□ 0.03
FANCA-209ENST00000562424 SOS1Q07889 1333 aaPredicted RBP15.2■□□□□ 0.02
FANCA-209ENST00000562424 KCNQ3O43525 872 aa15.2■□□□□ 0.02
FANCA-209ENST00000562424 GYS1P13807 737 aa15.2■□□□□ 0.02
FANCA-209ENST00000562424 YBX3P16989 372 aaKnown RBP eCLIP15.2■□□□□ 0.02
FANCA-209ENST00000562424 NLGN1Q8N2Q7 840 aa15.2■□□□□ 0.02
FANCA-209ENST00000562424 TEX13AQ9BXU3 409 aaPredicted RBP15.2■□□□□ 0.02
FANCA-209ENST00000562424 KDM3BQ7LBC6 1761 aa15.2■□□□□ 0.02
FANCA-209ENST00000562424 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
FANCA-209ENST00000562424 STARD3NLO95772 234 aa15.19■□□□□ 0.02
FANCA-209ENST00000562424 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.021e-5■■■■□ 24.6
FANCA-209ENST00000562424 TAF7Q15545 349 aaPredicted RBP15.19■□□□□ 0.02
FANCA-209ENST00000562424 ZBTB1Q9Y2K1 713 aa15.19■□□□□ 0.02
FANCA-209ENST00000562424 USP42Q9H9J4 1324 aaKnown RBP15.18■□□□□ 0.02
FANCA-209ENST00000562424 KIF13BQ9NQT8 1826 aa15.18■□□□□ 0.02
FANCA-209ENST00000562424 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
FANCA-209ENST00000562424 CD2APQ9Y5K6 639 aa15.18■□□□□ 0.02
FANCA-209ENST00000562424 COL15A1P39059 1388 aa15.17■□□□□ 0.02
FANCA-209ENST00000562424 MMP10P09238 476 aa15.17■□□□□ 0.02
FANCA-209ENST00000562424 SRP68Q9UHB9 627 aaKnown RBP15.17■□□□□ 0.02
FANCA-209ENST00000562424 TMPOP42166 694 aaKnown RBP15.16■□□□□ 0.02
FANCA-209ENST00000562424 THUMPD2Q9BTF0 503 aaKnown RBP15.16■□□□□ 0.02
FANCA-209ENST00000562424 ADAMTS8Q9UP79 889 aa15.16■□□□□ 0.02
FANCA-209ENST00000562424 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
FANCA-209ENST00000562424 ZPR1O75312 459 aa15.15■□□□□ 0.02
FANCA-209ENST00000562424 CANXP27824 592 aaKnown RBP15.15■□□□□ 0.02
FANCA-209ENST00000562424 EIF5P55010 431 aaKnown RBP15.15■□□□□ 0.02
FANCA-209ENST00000562424 RIPK4P57078 832 aa15.15■□□□□ 0.02
FANCA-209ENST00000562424 CCDC146Q8IYE0 955 aa15.15■□□□□ 0.02
FANCA-209ENST00000562424 PNISRQ8TF01 805 aaKnown RBP15.15■□□□□ 0.02
FANCA-209ENST00000562424 RUNDC1Q96C34 613 aa15.15■□□□□ 0.02
FANCA-209ENST00000562424 SNRPA1P09661 255 aaKnown RBP15.14■□□□□ 0.01
FANCA-209ENST00000562424 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
FANCA-209ENST00000562424 USPL1Q5W0Q7 1092 aa15.14■□□□□ 0.01
FANCA-209ENST00000562424 MIS18AQ9NYP9 233 aa15.14■□□□□ 0.01
FANCA-209ENST00000562424 NARFQ9UHQ1 456 aa15.14■□□□□ 0.01
FANCA-209ENST00000562424 USP16Q9Y5T5 823 aa15.14■□□□□ 0.01
FANCA-209ENST00000562424 SCN7AQ01118 1682 aa15.13■□□□□ 0.01
FANCA-209ENST00000562424 PRAMEF22A3QJZ6 481 aa15.13■□□□□ 0.01
FANCA-209ENST00000562424 A1BGP04217 495 aa15.13■□□□□ 0.01
FANCA-209ENST00000562424 PARP3Q9Y6F1 533 aa15.13■□□□□ 0.01
FANCA-209ENST00000562424 AFDNP55196 1824 aaKnown RBP15.13■□□□□ 0.01
FANCA-209ENST00000562424 KIAA1551Q9HCM1 1747 aa15.12■□□□□ 0.01
FANCA-209ENST00000562424 C10orf71Q711Q0 1435 aa15.12■□□□□ 0.01
FANCA-209ENST00000562424 CEP350Q5VT06 3117 aa15.12■□□□□ 0.01
FANCA-209ENST00000562424 A0A087WZG4 1122 aa15.12■□□□□ 0.01
FANCA-209ENST00000562424 IL6STP40189 918 aaPredicted RBP15.12■□□□□ 0.01
FANCA-209ENST00000562424 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
FANCA-209ENST00000562424 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
FANCA-209ENST00000562424 N4BP2Q86UW6 1770 aaPredicted RBP15.11■□□□□ 0.01
FANCA-209ENST00000562424 TM4SF1P30408 202 aa15.11■□□□□ 0.01
FANCA-209ENST00000562424 BCL2L12Q9HB09 334 aa15.11■□□□□ 0.01
FANCA-209ENST00000562424 NRXN2Q9P2S2 1712 aa15.1■□□□□ 0.01
FANCA-209ENST00000562424 ANP32CO43423 234 aa15.1■□□□□ 0.01
FANCA-209ENST00000562424 EIF4A1P60842 406 aaKnown RBP15.1■□□□□ 0.01
FANCA-209ENST00000562424 DDR1Q08345 913 aa15.1■□□□□ 0.01
FANCA-209ENST00000562424 NEUROD2Q15784 382 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms