RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 QSER1Q2KHR3 1735 aa16.26■□□□□ 0.19
CMTM4-203ENST00000561680 DNAJC10Q8IXB1 793 aa16.26■□□□□ 0.19
CMTM4-203ENST00000561680 TEX13AQ9BXU3 409 aaPredicted RBP16.26■□□□□ 0.19
CMTM4-203ENST00000561680 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
CMTM4-203ENST00000561680 USP16Q9Y5T5 823 aa16.26■□□□□ 0.19
CMTM4-203ENST00000561680 ERBB4Q15303 1308 aa16.25■□□□□ 0.19
CMTM4-203ENST00000561680 BCAR3O75815 825 aa16.25■□□□□ 0.19
CMTM4-203ENST00000561680 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
CMTM4-203ENST00000561680 BRPF1P55201 1214 aaPredicted RBP16.25■□□□□ 0.19
CMTM4-203ENST00000561680 BCL2L13Q9BXK5 485 aa16.25■□□□□ 0.19
CMTM4-203ENST00000561680 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
CMTM4-203ENST00000561680 ATP6V1AP38606 617 aa16.24■□□□□ 0.19
CMTM4-203ENST00000561680 ITPK1Q13572 414 aa16.24■□□□□ 0.19
CMTM4-203ENST00000561680 MRPL50Q8N5N7 158 aaKnown RBP16.24■□□□□ 0.19
CMTM4-203ENST00000561680 NECTIN2Q92692 538 aa16.24■□□□□ 0.19
CMTM4-203ENST00000561680 STK31Q9BXU1 1019 aa16.24■□□□□ 0.19
CMTM4-203ENST00000561680 KIF16BQ96L93 1317 aa16.23■□□□□ 0.19
CMTM4-203ENST00000561680 TCERG1O14776 1098 aaKnown RBP16.23■□□□□ 0.19
CMTM4-203ENST00000561680 PLSCR1O15162 318 aa16.23■□□□□ 0.19
CMTM4-203ENST00000561680 CHPF2Q9P2E5 772 aa16.23■□□□□ 0.19
CMTM4-203ENST00000561680 DBF4Q9UBU7 674 aaPredicted RBP16.23■□□□□ 0.19
CMTM4-203ENST00000561680 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
CMTM4-203ENST00000561680 STARD3NLO95772 234 aa16.22■□□□□ 0.19
CMTM4-203ENST00000561680 APBA3O96018 575 aa16.22■□□□□ 0.19
CMTM4-203ENST00000561680 CYP19A1P11511 503 aaPredicted RBP16.22■□□□□ 0.19
CMTM4-203ENST00000561680 PDIA6Q15084 440 aa16.22■□□□□ 0.19
CMTM4-203ENST00000561680 DDX21Q9NR30 783 aaKnown RBP eCLIP16.22■□□□□ 0.19
CMTM4-203ENST00000561680 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
CMTM4-203ENST00000561680 PROSER3Q2NL68 480 aa16.21■□□□□ 0.19
CMTM4-203ENST00000561680 SLC27A3Q5K4L6 730 aa16.21■□□□□ 0.19
CMTM4-203ENST00000561680 SUPT16HQ9Y5B9 1047 aaKnown RBP16.21■□□□□ 0.19
CMTM4-203ENST00000561680 CNTNAP4Q9C0A0 1308 aa16.2■□□□□ 0.18
CMTM4-203ENST00000561680 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
CMTM4-203ENST00000561680 RRP1P56182 461 aaKnown RBP16.2■□□□□ 0.18
CMTM4-203ENST00000561680 LRP10Q7Z4F1 713 aa16.2■□□□□ 0.18
CMTM4-203ENST00000561680 LINC00116Q8NCU8 138 aa16.2■□□□□ 0.18
CMTM4-203ENST00000561680 NBPF26B4DH59 902 aa16.19■□□□□ 0.18
CMTM4-203ENST00000561680 ANXA1P04083 346 aa16.19■□□□□ 0.18
CMTM4-203ENST00000561680 A1BGP04217 495 aa16.19■□□□□ 0.18
CMTM4-203ENST00000561680 CRKLP46109 303 aaKnown RBP16.19■□□□□ 0.18
CMTM4-203ENST00000561680 KCNQ4P56696 695 aa16.19■□□□□ 0.18
CMTM4-203ENST00000561680 NBPF14Q5TI25 921 aa16.19■□□□□ 0.18
CMTM4-203ENST00000561680 NBPF10Q6P3W6 841 aaKnown RBP16.19■□□□□ 0.18
CMTM4-203ENST00000561680 NBPF15Q8N660 670 aa16.19■□□□□ 0.18
CMTM4-203ENST00000561680 LRRC4BQ9NT99 713 aa16.19■□□□□ 0.18
CMTM4-203ENST00000561680 HYPKQ9NX55 129 aa16.19■□□□□ 0.18
CMTM4-203ENST00000561680 TXNRD1Q16881 649 aa16.18■□□□□ 0.18
CMTM4-203ENST00000561680 G2E3Q7L622 706 aa16.18■□□□□ 0.18
CMTM4-203ENST00000561680 PROM2Q8N271 834 aa16.18■□□□□ 0.18
CMTM4-203ENST00000561680 CCDC87Q9NVE4 849 aa16.18■□□□□ 0.18
CMTM4-203ENST00000561680 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
CMTM4-203ENST00000561680 PTPRCP08575 1304 aa16.18■□□□□ 0.18
CMTM4-203ENST00000561680 PXDNLA1KZ92 1463 aa16.17■□□□□ 0.18
CMTM4-203ENST00000561680 PIP4K2AP48426 406 aaPredicted RBP16.17■□□□□ 0.18
CMTM4-203ENST00000561680 FLIIQ13045 1269 aa16.17■□□□□ 0.18
CMTM4-203ENST00000561680 SF3B2Q13435 895 aaKnown RBP16.17■□□□□ 0.18
CMTM4-203ENST00000561680 INTS5Q6P9B9 1019 aaKnown RBP16.17■□□□□ 0.18
CMTM4-203ENST00000561680 CCDC125Q86Z20 511 aa16.17■□□□□ 0.18
CMTM4-203ENST00000561680 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.17■□□□□ 0.18
CMTM4-203ENST00000561680 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
CMTM4-203ENST00000561680 NOB1Q9ULX3 412 aaKnown RBP16.17■□□□□ 0.18
CMTM4-203ENST00000561680 MYL6BP14649 208 aa16.16■□□□□ 0.18
CMTM4-203ENST00000561680 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
CMTM4-203ENST00000561680 ZKSCAN2Q63HK3 967 aa16.16■□□□□ 0.18
CMTM4-203ENST00000561680 FRAT1Q92837 279 aaPredicted RBP16.16■□□□□ 0.18
CMTM4-203ENST00000561680 CAMKK2Q96RR4 588 aa16.16■□□□□ 0.18
CMTM4-203ENST00000561680 PHAXQ9H814 394 aaKnown RBP16.16■□□□□ 0.18
CMTM4-203ENST00000561680 CASZ1Q86V15 1759 aa16.15■□□□□ 0.18
CMTM4-203ENST00000561680 IPO8O15397 1037 aaKnown RBP16.15■□□□□ 0.18
CMTM4-203ENST00000561680 PLIN1O60240 522 aa16.15■□□□□ 0.18
CMTM4-203ENST00000561680 TRIM27P14373 513 aa16.15■□□□□ 0.18
CMTM4-203ENST00000561680 HMGB2P26583 209 aaKnown RBP16.15■□□□□ 0.18
CMTM4-203ENST00000561680 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
CMTM4-203ENST00000561680 IL6STP40189 918 aaPredicted RBP16.15■□□□□ 0.18
CMTM4-203ENST00000561680 BAG6P46379 1132 aa16.15■□□□□ 0.18
CMTM4-203ENST00000561680 ATF7IPQ6VMQ6 1270 aa16.15■□□□□ 0.18
CMTM4-203ENST00000561680 XAGE3Q8WTP9 111 aa16.14■□□□□ 0.17
CMTM4-203ENST00000561680 ABCC4O15439 1325 aa16.14■□□□□ 0.17
CMTM4-203ENST00000561680 ADCY9O60503 1353 aa16.13■□□□□ 0.17
CMTM4-203ENST00000561680 MYH3P11055 1940 aa16.13■□□□□ 0.17
CMTM4-203ENST00000561680 COL15A1P39059 1388 aa16.13■□□□□ 0.17
CMTM4-203ENST00000561680 EIF5P55010 431 aaKnown RBP16.13■□□□□ 0.17
CMTM4-203ENST00000561680 EN1Q05925 392 aaPredicted RBP16.13■□□□□ 0.17
CMTM4-203ENST00000561680 FKBP5Q13451 457 aaPredicted RBP16.13■□□□□ 0.17
CMTM4-203ENST00000561680 EZH2Q15910 746 aaKnown RBP16.13■□□□□ 0.17
CMTM4-203ENST00000561680 API5Q9BZZ5 524 aaKnown RBP16.13■□□□□ 0.17
CMTM4-203ENST00000561680 TNNQ9UQP3 1299 aa16.13■□□□□ 0.17
CMTM4-203ENST00000561680 COL24A1Q17RW2 1714 aa16.13■□□□□ 0.17
CMTM4-203ENST00000561680 COPS6Q7L5N1 327 aa16.12■□□□□ 0.17
CMTM4-203ENST00000561680 RPS6KA4O75676 772 aa16.11■□□□□ 0.17
CMTM4-203ENST00000561680 DDX58O95786 925 aaKnown RBP16.11■□□□□ 0.17
CMTM4-203ENST00000561680 MS4A1P11836 297 aa16.11■□□□□ 0.17
CMTM4-203ENST00000561680 AIMP1Q12904 312 aaKnown RBP16.11■□□□□ 0.17
CMTM4-203ENST00000561680 PDE3AQ14432 1141 aa16.11■□□□□ 0.17
CMTM4-203ENST00000561680 DEFB132Q7Z7B7 95 aa16.11■□□□□ 0.17
CMTM4-203ENST00000561680 AK7Q96M32 723 aa16.11■□□□□ 0.17
CMTM4-203ENST00000561680 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
CMTM4-203ENST00000561680 GNPATO15228 680 aa16.1■□□□□ 0.17
CMTM4-203ENST00000561680 RLBP1P12271 317 aa16.1■□□□□ 0.17
CMTM4-203ENST00000561680 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms