RNA–Protein interactions for RNA: ENST00000561442.5

USP3-221, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-221ENST00000561442 SSFA2P28290 1259 aa18.69■□□□□ 0.58
USP3-221ENST00000561442 MBIPQ9NS73 344 aa18.69■□□□□ 0.58
USP3-221ENST00000561442 IFT57Q9NWB7 429 aa18.69■□□□□ 0.58
USP3-221ENST00000561442 GIGYF1O75420 1035 aaPredicted RBP18.68■□□□□ 0.58
USP3-221ENST00000561442 A1BGP04217 495 aa18.68■□□□□ 0.58
USP3-221ENST00000561442 ZNF853P0CG23 659 aa18.68■□□□□ 0.58
USP3-221ENST00000561442 GNAI1P63096 354 aa18.68■□□□□ 0.58
USP3-221ENST00000561442 KRT24Q2M2I5 525 aa18.68■□□□□ 0.58
USP3-221ENST00000561442 NCBP3Q53F19 620 aaKnown RBP18.68■□□□□ 0.58
USP3-221ENST00000561442 FLAD1Q8NFF5 587 aa18.68■□□□□ 0.58
USP3-221ENST00000561442 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
USP3-221ENST00000561442 COL5A3P25940 1745 aaPredicted RBP18.67■□□□□ 0.58
USP3-221ENST00000561442 PIP4K2AP48426 406 aaPredicted RBP18.67■□□□□ 0.58
USP3-221ENST00000561442 TRAPPC3LQ5T215 181 aa18.67■□□□□ 0.58
USP3-221ENST00000561442 KDM3BQ7LBC6 1761 aa18.67■□□□□ 0.58
USP3-221ENST00000561442 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
USP3-221ENST00000561442 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
USP3-221ENST00000561442 TSR2Q969E8 191 aaKnown RBP18.66■□□□□ 0.58
USP3-221ENST00000561442 ZNF330Q9Y3S2 320 aaPredicted RBP18.66■□□□□ 0.58
USP3-221ENST00000561442 SOS1Q07889 1333 aaPredicted RBP18.66■□□□□ 0.58
USP3-221ENST00000561442 CASZ1Q86V15 1759 aa18.65■□□□□ 0.58
USP3-221ENST00000561442 TUBGCP6Q96RT7 1819 aa18.65■□□□□ 0.58
USP3-221ENST00000561442 ARHGEF1Q92888 912 aaKnown RBP18.65■□□□□ 0.58
USP3-221ENST00000561442 MTFR1LQ9H019 292 aa18.65■□□□□ 0.58
USP3-221ENST00000561442 ADRA2BP18089 450 aa18.64■□□□□ 0.57
USP3-221ENST00000561442 RFC4P35249 363 aa18.64■□□□□ 0.57
USP3-221ENST00000561442 WDR63Q8IWG1 891 aa18.64■□□□□ 0.57
USP3-221ENST00000561442 NGEFQ8N5V2 710 aa18.64■□□□□ 0.57
USP3-221ENST00000561442 SPON1Q9HCB6 807 aa18.64■□□□□ 0.57
USP3-221ENST00000561442 EIF2S2P20042 333 aaKnown RBP18.63■□□□□ 0.57
USP3-221ENST00000561442 SLC16A10Q8TF71 515 aa18.63■□□□□ 0.57
USP3-221ENST00000561442 NECTIN2Q92692 538 aa18.63■□□□□ 0.57
USP3-221ENST00000561442 SRP68Q9UHB9 627 aaKnown RBP18.63■□□□□ 0.57
USP3-221ENST00000561442 IL16Q14005 1332 aa18.63■□□□□ 0.57
USP3-221ENST00000561442 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
USP3-221ENST00000561442 COL15A1P39059 1388 aa18.62■□□□□ 0.57
USP3-221ENST00000561442 UBR3Q6ZT12 1888 aa18.62■□□□□ 0.57
USP3-221ENST00000561442 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
USP3-221ENST00000561442 NBPF26B4DH59 902 aa18.61■□□□□ 0.57
USP3-221ENST00000561442 ELL2O00472 640 aaPredicted RBP18.61■□□□□ 0.57
USP3-221ENST00000561442 EIF5P55010 431 aaKnown RBP18.61■□□□□ 0.57
USP3-221ENST00000561442 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
USP3-221ENST00000561442 NBPF10Q6P3W6 841 aaKnown RBP18.61■□□□□ 0.57
USP3-221ENST00000561442 NBPF15Q8N660 670 aa18.61■□□□□ 0.57
USP3-221ENST00000561442 ARXQ96QS3 562 aa18.61■□□□□ 0.57
USP3-221ENST00000561442 QSER1Q2KHR3 1735 aa18.6■□□□□ 0.57
USP3-221ENST00000561442 ZNF521Q96K83 1311 aa18.6■□□□□ 0.57
USP3-221ENST00000561442 IL6STP40189 918 aaPredicted RBP18.6■□□□□ 0.57
USP3-221ENST00000561442 PTGER2P43116 358 aa18.6■□□□□ 0.57
USP3-221ENST00000561442 C8orf58Q8NAV2 365 aa18.6■□□□□ 0.57
USP3-221ENST00000561442 FANCIQ9NVI1 1328 aa18.59■□□□□ 0.57
USP3-221ENST00000561442 NPM2Q86SE8 214 aaKnown RBP18.59■□□□□ 0.57
USP3-221ENST00000561442 USP42Q9H9J4 1324 aaKnown RBP18.58■□□□□ 0.57
USP3-221ENST00000561442 ZPR1O75312 459 aa18.58■□□□□ 0.56
USP3-221ENST00000561442 MYL6BP14649 208 aa18.58■□□□□ 0.56
USP3-221ENST00000561442 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
USP3-221ENST00000561442 A0A087WZG4 1122 aa18.57■□□□□ 0.56
USP3-221ENST00000561442 ANXA1P04083 346 aa18.57■□□□□ 0.56
USP3-221ENST00000561442 GYS1P13807 737 aa18.57■□□□□ 0.56
USP3-221ENST00000561442 POLD1P28340 1107 aa18.57■□□□□ 0.56
USP3-221ENST00000561442 HDGFL1Q5TGJ6 251 aa18.57■□□□□ 0.56
USP3-221ENST00000561442 USPL1Q5W0Q7 1092 aa18.57■□□□□ 0.56
USP3-221ENST00000561442 TSPYL6Q8N831 410 aa18.57■□□□□ 0.56
USP3-221ENST00000561442 HOXB7P09629 217 aa18.56■□□□□ 0.56
USP3-221ENST00000561442 HNRNPUQ00839 825 aaKnown RBP eCLIP18.56■□□□□ 0.56
USP3-221ENST00000561442 FKBP8Q14318 412 aa18.56■□□□□ 0.56
USP3-221ENST00000561442 PROSER3Q2NL68 480 aa18.56■□□□□ 0.56
USP3-221ENST00000561442 SGIP1Q9BQI5 828 aa18.56■□□□□ 0.56
USP3-221ENST00000561442 PPP1R1BQ9UD71 204 aaPredicted RBP18.56■□□□□ 0.56
USP3-221ENST00000561442 NARFQ9UHQ1 456 aa18.56■□□□□ 0.56
USP3-221ENST00000561442 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
USP3-221ENST00000561442 DZIP3Q86Y13 1208 aaKnown RBP18.55■□□□□ 0.56
USP3-221ENST00000561442 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
USP3-221ENST00000561442 ERBB4Q15303 1308 aa18.54■□□□□ 0.56
USP3-221ENST00000561442 PDIA6Q15084 440 aa18.54■□□□□ 0.56
USP3-221ENST00000561442 BCL2L12Q9HB09 334 aa18.54■□□□□ 0.56
USP3-221ENST00000561442 CHPF2Q9P2E5 772 aa18.54■□□□□ 0.56
USP3-221ENST00000561442 LAMB4A4D0S4 1761 aa18.54■□□□□ 0.56
USP3-221ENST00000561442 MMP10P09238 476 aa18.53■□□□□ 0.56
USP3-221ENST00000561442 EXOSC9Q06265 439 aaKnown RBP18.53■□□□□ 0.56
USP3-221ENST00000561442 NLGN1Q8N2Q7 840 aa18.53■□□□□ 0.56
USP3-221ENST00000561442 CDCA7LQ96GN5 454 aa18.53■□□□□ 0.56
USP3-221ENST00000561442 LRP5O75197 1615 aa18.52■□□□□ 0.56
USP3-221ENST00000561442 C4AP0C0L4 1744 aa18.52■□□□□ 0.56
USP3-221ENST00000561442 CAMTA2O94983 1202 aa18.52■□□□□ 0.56
USP3-221ENST00000561442 TWISTNBQ3B726 338 aaPredicted RBP18.52■□□□□ 0.56
USP3-221ENST00000561442 TTLL7Q6ZT98 887 aa18.52■□□□□ 0.56
USP3-221ENST00000561442 E9PSI1 815 aa18.51■□□□□ 0.55
USP3-221ENST00000561442 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
USP3-221ENST00000561442 KLHL34Q8N239 644 aa18.51■□□□□ 0.55
USP3-221ENST00000561442 DDX21Q9NR30 783 aaKnown RBP eCLIP18.51■□□□□ 0.55
USP3-221ENST00000561442 SLFN5Q08AF3 891 aa18.5■□□□□ 0.55
USP3-221ENST00000561442 AIMP1Q12904 312 aaKnown RBP18.5■□□□□ 0.55
USP3-221ENST00000561442 KIF6Q6ZMV9 814 aa18.5■□□□□ 0.55
USP3-221ENST00000561442 BICDL1Q6ZP65 573 aa18.5■□□□□ 0.55
USP3-221ENST00000561442 LRP10Q7Z4F1 713 aa18.5■□□□□ 0.55
USP3-221ENST00000561442 XAGE3Q8WTP9 111 aa18.5■□□□□ 0.55
USP3-221ENST00000561442 DDR1Q08345 913 aa18.49■□□□□ 0.55
USP3-221ENST00000561442 ZBTB3Q9H5J0 574 aa18.49■□□□□ 0.55
USP3-221ENST00000561442 DBF4Q9UBU7 674 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 793 ms