RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
HERC1-214ENST00000561400 TJP1Q07157 1748 aa15□□□□□ -0.01
HERC1-214ENST00000561400 LOC102724428A0A0B4J2F2 783 aa15□□□□□ -0.01
HERC1-214ENST00000561400 GIGYF1O75420 1035 aaPredicted RBP15□□□□□ -0.01
HERC1-214ENST00000561400 SIK1P57059 783 aa15□□□□□ -0.01
HERC1-214ENST00000561400 ZNF831Q5JPB2 1677 aa14.99□□□□□ -0.01
HERC1-214ENST00000561400 KCNQ4P56696 695 aa14.99□□□□□ -0.01
HERC1-214ENST00000561400 PLSCR1O15162 318 aa14.98□□□□□ -0.01
HERC1-214ENST00000561400 TAF1LQ8IZX4 1826 aa14.98□□□□□ -0.01
HERC1-214ENST00000561400 PROM2Q8N271 834 aa14.98□□□□□ -0.01
HERC1-214ENST00000561400 RGPD3A6NKT7 1758 aaPredicted RBP14.98□□□□□ -0.01
HERC1-214ENST00000561400 RGPD4Q7Z3J3 1758 aa14.98□□□□□ -0.01
HERC1-214ENST00000561400 CICQ96RK0 1608 aaPredicted RBP14.98□□□□□ -0.01
HERC1-214ENST00000561400 SNRPA1P09661 255 aaKnown RBP14.97□□□□□ -0.01
HERC1-214ENST00000561400 TWISTNBQ3B726 338 aaPredicted RBP14.97□□□□□ -0.01
HERC1-214ENST00000561400 DHX37Q8IY37 1157 aaKnown RBP14.97□□□□□ -0.01
HERC1-214ENST00000561400 USP16Q9Y5T5 823 aa14.97□□□□□ -0.01
HERC1-214ENST00000561400 LAMB4A4D0S4 1761 aa14.97□□□□□ -0.01
HERC1-214ENST00000561400 VAMP4O75379 141 aa14.97□□□□□ -0.01
HERC1-214ENST00000561400 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
HERC1-214ENST00000561400 ITPK1Q13572 414 aa14.97□□□□□ -0.01
HERC1-214ENST00000561400 COL5A3P25940 1745 aaPredicted RBP14.96□□□□□ -0.01
HERC1-214ENST00000561400 NPM2Q86SE8 214 aaKnown RBP14.96□□□□□ -0.01
HERC1-214ENST00000561400 DNAJC10Q8IXB1 793 aa14.96□□□□□ -0.01
HERC1-214ENST00000561400 UPF1Q92900 1129 aaKnown RBP eCLIP14.96□□□□□ -0.01
HERC1-214ENST00000561400 LRRC4BQ9NT99 713 aa14.96□□□□□ -0.01
HERC1-214ENST00000561400 MYH14Q7Z406 1995 aaKnown RBP14.96□□□□□ -0.02
HERC1-214ENST00000561400 EN1Q05925 392 aaPredicted RBP14.96□□□□□ -0.02
HERC1-214ENST00000561400 DEFB132Q7Z7B7 95 aa14.96□□□□□ -0.02
HERC1-214ENST00000561400 CCNL1Q9UK58 526 aaPredicted RBP14.96□□□□□ -0.02
HERC1-214ENST00000561400 SF3B2Q13435 895 aaKnown RBP14.95□□□□□ -0.02
HERC1-214ENST00000561400 TXNRD1Q16881 649 aa14.95□□□□□ -0.02
HERC1-214ENST00000561400 CCDC125Q86Z20 511 aa14.95□□□□□ -0.02
HERC1-214ENST00000561400 HOXB7P09629 217 aa14.94□□□□□ -0.02
HERC1-214ENST00000561400 CAMKK2Q96RR4 588 aa14.94□□□□□ -0.02
HERC1-214ENST00000561400 EIF2S2P20042 333 aaKnown RBP14.94□□□□□ -0.02
HERC1-214ENST00000561400 NECTIN2Q92692 538 aa14.94□□□□□ -0.02
HERC1-214ENST00000561400 BAG6P46379 1132 aa14.93□□□□□ -0.02
HERC1-214ENST00000561400 EZH2Q15910 746 aaKnown RBP14.93□□□□□ -0.02
HERC1-214ENST00000561400 CYP19A1P11511 503 aaPredicted RBP14.93□□□□□ -0.02
HERC1-214ENST00000561400 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
HERC1-214ENST00000561400 HDGFL1Q5TGJ6 251 aa14.93□□□□□ -0.02
HERC1-214ENST00000561400 LINC00116Q8NCU8 138 aa14.93□□□□□ -0.02
HERC1-214ENST00000561400 TEX13AQ9BXU3 409 aaPredicted RBP14.93□□□□□ -0.02
HERC1-214ENST00000561400 SOS1Q07889 1333 aaPredicted RBP14.93□□□□□ -0.02
HERC1-214ENST00000561400 TCERG1O14776 1098 aaKnown RBP14.92□□□□□ -0.02
HERC1-214ENST00000561400 PAXIP1Q6ZW49 1069 aaPredicted RBP14.92□□□□□ -0.02
HERC1-214ENST00000561400 RREB1Q92766 1687 aa14.92□□□□□ -0.02
HERC1-214ENST00000561400 A1BGP04217 495 aa14.92□□□□□ -0.02
HERC1-214ENST00000561400 CACNA1FO60840 1977 aa14.91□□□□□ -0.02
HERC1-214ENST00000561400 STARD3NLO95772 234 aa14.91□□□□□ -0.02
HERC1-214ENST00000561400 CT47B1P0C2W7 299 aaPredicted RBP14.91□□□□□ -0.02
HERC1-214ENST00000561400 PIP4K2AP48426 406 aaPredicted RBP14.91□□□□□ -0.02
HERC1-214ENST00000561400 C4BP0C0L5 1744 aa14.91□□□□□ -0.02
HERC1-214ENST00000561400 CRKLP46109 303 aaKnown RBP14.9□□□□□ -0.02
HERC1-214ENST00000561400 PDIA6Q15084 440 aa14.9□□□□□ -0.02
HERC1-214ENST00000561400 CHPF2Q9P2E5 772 aa14.9□□□□□ -0.02
HERC1-214ENST00000561400 NBPF26B4DH59 902 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 ANXA1P04083 346 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 RARSP54136 660 aaKnown RBP14.89□□□□□ -0.03
HERC1-214ENST00000561400 PROSER3Q2NL68 480 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 NBPF14Q5TI25 921 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 NBPF10Q6P3W6 841 aaKnown RBP14.89□□□□□ -0.03
HERC1-214ENST00000561400 INTS5Q6P9B9 1019 aaKnown RBP14.89□□□□□ -0.03
HERC1-214ENST00000561400 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
HERC1-214ENST00000561400 NBPF15Q8N660 670 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 SSH1Q8WYL5 1049 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 BCL2L13Q9BXK5 485 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 NUP188Q5SRE5 1749 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 ZNF428Q96B54 188 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 ZBTB1Q9Y2K1 713 aa14.89□□□□□ -0.03
HERC1-214ENST00000561400 CCDC87Q9NVE4 849 aa14.88□□□□□ -0.03
HERC1-214ENST00000561400 CNTNAP4Q9C0A0 1308 aa14.88□□□□□ -0.03
HERC1-214ENST00000561400 UBR3Q6ZT12 1888 aa14.87□□□□□ -0.03
HERC1-214ENST00000561400 BCAR3O75815 825 aa14.87□□□□□ -0.03
HERC1-214ENST00000561400 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
HERC1-214ENST00000561400 MYL6BP14649 208 aa14.87□□□□□ -0.03
HERC1-214ENST00000561400 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
HERC1-214ENST00000561400 RC3H1Q5TC82 1133 aaKnown RBP14.87□□□□□ -0.03
HERC1-214ENST00000561400 LRP10Q7Z4F1 713 aa14.87□□□□□ -0.03
HERC1-214ENST00000561400 DDX21Q9NR30 783 aaKnown RBP eCLIP14.87□□□□□ -0.03
HERC1-214ENST00000561400 DBF4Q9UBU7 674 aaPredicted RBP14.87□□□□□ -0.03
HERC1-214ENST00000561400 RCAN3Q9UKA8 241 aa14.87□□□□□ -0.03
HERC1-214ENST00000561400 ALDH1L2Q3SY69 923 aa14.86□□□□□ -0.03
HERC1-214ENST00000561400 STK31Q9BXU1 1019 aa14.86□□□□□ -0.03
HERC1-214ENST00000561400 TUBGCP6Q96RT7 1819 aa14.86□□□□□ -0.03
HERC1-214ENST00000561400 ERBB4Q15303 1308 aa14.86□□□□□ -0.03
HERC1-214ENST00000561400 SMIM5Q71RC9 77 aa14.86□□□□□ -0.03
HERC1-214ENST00000561400 AMIGO3Q86WK7 504 aa14.86□□□□□ -0.03
HERC1-214ENST00000561400 SMC4Q9NTJ3 1288 aa14.86□□□□□ -0.03
HERC1-214ENST00000561400 G2E3Q7L622 706 aa14.85□□□□□ -0.03
HERC1-214ENST00000561400 MRPL50Q8N5N7 158 aaKnown RBP14.85□□□□□ -0.03
HERC1-214ENST00000561400 PHAXQ9H814 394 aaKnown RBP14.85□□□□□ -0.03
HERC1-214ENST00000561400 ZNF827Q17R98 1081 aa14.85□□□□□ -0.03
HERC1-214ENST00000561400 GNPATO15228 680 aa14.84□□□□□ -0.03
HERC1-214ENST00000561400 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
HERC1-214ENST00000561400 RPS6KA4O75676 772 aa14.84□□□□□ -0.03
HERC1-214ENST00000561400 IL6STP40189 918 aaPredicted RBP14.84□□□□□ -0.03
HERC1-214ENST00000561400 EIF5P55010 431 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms