RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 KDM3BQ7LBC6 1761 aa15.59■□□□□ 0.09
RABGGTA-218ENST00000560777 PHF14O94880 888 aa15.59■□□□□ 0.09
RABGGTA-218ENST00000560777 SSFA2P28290 1259 aa15.59■□□□□ 0.09
RABGGTA-218ENST00000560777 FLAD1Q8NFF5 587 aa15.59■□□□□ 0.09
RABGGTA-218ENST00000560777 MBIPQ9NS73 344 aa15.59■□□□□ 0.09
RABGGTA-218ENST00000560777 CCDC87Q9NVE4 849 aa15.59■□□□□ 0.09
RABGGTA-218ENST00000560777 RTCBQ9Y3I0 505 aaKnown RBP15.59■□□□□ 0.09
RABGGTA-218ENST00000560777 GNAI1P63096 354 aa15.58■□□□□ 0.08
RABGGTA-218ENST00000560777 TRAPPC3LQ5T215 181 aa15.58■□□□□ 0.08
RABGGTA-218ENST00000560777 WDR63Q8IWG1 891 aa15.58■□□□□ 0.08
RABGGTA-218ENST00000560777 ZBTB1Q9Y2K1 713 aa15.58■□□□□ 0.08
RABGGTA-218ENST00000560777 TUBGCP6Q96RT7 1819 aa15.58■□□□□ 0.08
RABGGTA-218ENST00000560777 UBR3Q6ZT12 1888 aa15.57■□□□□ 0.08
RABGGTA-218ENST00000560777 MSH5O43196 834 aa15.57■□□□□ 0.08
RABGGTA-218ENST00000560777 ZBTB7AO95365 584 aa15.57■□□□□ 0.08
RABGGTA-218ENST00000560777 A1BGP04217 495 aa15.57■□□□□ 0.08
RABGGTA-218ENST00000560777 ARHGEF1Q92888 912 aaKnown RBP15.57■□□□□ 0.08
RABGGTA-218ENST00000560777 QSER1Q2KHR3 1735 aa15.57■□□□□ 0.08
RABGGTA-218ENST00000560777 CASZ1Q86V15 1759 aa15.57■□□□□ 0.08
RABGGTA-218ENST00000560777 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
RABGGTA-218ENST00000560777 KRT24Q2M2I5 525 aa15.56■□□□□ 0.08
RABGGTA-218ENST00000560777 SLC16A10Q8TF71 515 aa15.56■□□□□ 0.08
RABGGTA-218ENST00000560777 IL16Q14005 1332 aa15.56■□□□□ 0.08
RABGGTA-218ENST00000560777 ZNF521Q96K83 1311 aa15.55■□□□□ 0.08
RABGGTA-218ENST00000560777 ADRA2BP18089 450 aa15.55■□□□□ 0.08
RABGGTA-218ENST00000560777 MTFR1LQ9H019 292 aa15.55■□□□□ 0.08
RABGGTA-218ENST00000560777 ATF5Q9Y2D1 282 aaPredicted RBP15.55■□□□□ 0.08
RABGGTA-218ENST00000560777 SOS1Q07889 1333 aaPredicted RBP15.54■□□□□ 0.08
RABGGTA-218ENST00000560777 EIF5P55010 431 aaKnown RBP15.54■□□□□ 0.08
RABGGTA-218ENST00000560777 SPINK5Q9NQ38 1064 aaPredicted RBP15.54■□□□□ 0.08
RABGGTA-218ENST00000560777 NBPF26B4DH59 902 aa15.53■□□□□ 0.08
RABGGTA-218ENST00000560777 RFC4P35249 363 aa15.53■□□□□ 0.08
RABGGTA-218ENST00000560777 IL6STP40189 918 aaPredicted RBP15.53■□□□□ 0.08
RABGGTA-218ENST00000560777 PIP4K2AP48426 406 aaPredicted RBP15.53■□□□□ 0.08
RABGGTA-218ENST00000560777 NBPF10Q6P3W6 841 aaKnown RBP15.53■□□□□ 0.08
RABGGTA-218ENST00000560777 NBPF15Q8N660 670 aa15.53■□□□□ 0.08
RABGGTA-218ENST00000560777 TSR2Q969E8 191 aaKnown RBP15.53■□□□□ 0.08
RABGGTA-218ENST00000560777 SPON1Q9HCB6 807 aa15.53■□□□□ 0.08
RABGGTA-218ENST00000560777 SRCAPQ6ZRS2 3230 aa15.53■□□□□ 0.08
RABGGTA-218ENST00000560777 EIF2S2P20042 333 aaKnown RBP15.52■□□□□ 0.08
RABGGTA-218ENST00000560777 PTGER2P43116 358 aa15.52■□□□□ 0.08
RABGGTA-218ENST00000560777 DUSP27Q5VZP5 1158 aa15.52■□□□□ 0.08
RABGGTA-218ENST00000560777 C8orf58Q8NAV2 365 aa15.52■□□□□ 0.08
RABGGTA-218ENST00000560777 SGIP1Q9BQI5 828 aa15.51■□□□□ 0.07
RABGGTA-218ENST00000560777 ELL2O00472 640 aaPredicted RBP15.5■□□□□ 0.07
RABGGTA-218ENST00000560777 HOXB7P09629 217 aa15.5■□□□□ 0.07
RABGGTA-218ENST00000560777 PDIA6Q15084 440 aa15.5■□□□□ 0.07
RABGGTA-218ENST00000560777 MSL1Q68DK7 614 aa15.5■□□□□ 0.07
RABGGTA-218ENST00000560777 SRP68Q9UHB9 627 aaKnown RBP15.5■□□□□ 0.07
RABGGTA-218ENST00000560777 ZNF330Q9Y3S2 320 aaPredicted RBP15.5■□□□□ 0.07
RABGGTA-218ENST00000560777 COL15A1P39059 1388 aa15.49■□□□□ 0.07
RABGGTA-218ENST00000560777 USP42Q9H9J4 1324 aaKnown RBP15.49■□□□□ 0.07
RABGGTA-218ENST00000560777 A0A087WZG4 1122 aa15.49■□□□□ 0.07
RABGGTA-218ENST00000560777 GYS1P13807 737 aa15.49■□□□□ 0.07
RABGGTA-218ENST00000560777 TSPYL6Q8N831 410 aa15.49■□□□□ 0.07
RABGGTA-218ENST00000560777 NECTIN2Q92692 538 aa15.49■□□□□ 0.07
RABGGTA-218ENST00000560777 NARFQ9UHQ1 456 aa15.49■□□□□ 0.07
RABGGTA-218ENST00000560777 TBC1D2BQ9UPU7 963 aa15.49■□□□□ 0.07
RABGGTA-218ENST00000560777 FANCIQ9NVI1 1328 aa15.48■□□□□ 0.07
RABGGTA-218ENST00000560777 ZPR1O75312 459 aa15.48■□□□□ 0.07
RABGGTA-218ENST00000560777 GOLGA2Q08379 1002 aa15.48■□□□□ 0.07
RABGGTA-218ENST00000560777 USPL1Q5W0Q7 1092 aa15.48■□□□□ 0.07
RABGGTA-218ENST00000560777 NLGN1Q8N2Q7 840 aa15.48■□□□□ 0.07
RABGGTA-218ENST00000560777 ERBB4Q15303 1308 aa15.47■□□□□ 0.07
RABGGTA-218ENST00000560777 LAMB4A4D0S4 1761 aa15.47■□□□□ 0.07
RABGGTA-218ENST00000560777 MYL6BP14649 208 aa15.47■□□□□ 0.07
RABGGTA-218ENST00000560777 PROSER3Q2NL68 480 aa15.47■□□□□ 0.07
RABGGTA-218ENST00000560777 HDGFL1Q5TGJ6 251 aa15.47■□□□□ 0.07
RABGGTA-218ENST00000560777 LRP10Q7Z4F1 713 aa15.47■□□□□ 0.07
RABGGTA-218ENST00000560777 NPM2Q86SE8 214 aaKnown RBP15.47■□□□□ 0.07
RABGGTA-218ENST00000560777 MYH16Q9H6N6 1097 aa15.47■□□□□ 0.07
RABGGTA-218ENST00000560777 BCL2L12Q9HB09 334 aa15.47■□□□□ 0.07
RABGGTA-218ENST00000560777 ANXA1P04083 346 aa15.46■□□□□ 0.07
RABGGTA-218ENST00000560777 SLFN5Q08AF3 891 aa15.46■□□□□ 0.07
RABGGTA-218ENST00000560777 FKBP8Q14318 412 aa15.46■□□□□ 0.07
RABGGTA-218ENST00000560777 DZIP3Q86Y13 1208 aaKnown RBP15.46■□□□□ 0.07
RABGGTA-218ENST00000560777 CDCA7LQ96GN5 454 aa15.46■□□□□ 0.07
RABGGTA-218ENST00000560777 ARXQ96QS3 562 aa15.46■□□□□ 0.07
RABGGTA-218ENST00000560777 C4AP0C0L4 1744 aa15.46■□□□□ 0.06
RABGGTA-218ENST00000560777 COL24A1Q17RW2 1714 aa15.46■□□□□ 0.06
RABGGTA-218ENST00000560777 CAMTA2O94983 1202 aa15.45■□□□□ 0.06
RABGGTA-218ENST00000560777 POLD1P28340 1107 aa15.45■□□□□ 0.06
RABGGTA-218ENST00000560777 HNRNPUQ00839 825 aaKnown RBP eCLIP15.45■□□□□ 0.06
RABGGTA-218ENST00000560777 EXOSC9Q06265 439 aaKnown RBP15.45■□□□□ 0.06
RABGGTA-218ENST00000560777 DDX21Q9NR30 783 aaKnown RBP eCLIP15.45■□□□□ 0.06
RABGGTA-218ENST00000560777 CHPF2Q9P2E5 772 aa15.45■□□□□ 0.06
RABGGTA-218ENST00000560777 LRP5O75197 1615 aa15.44■□□□□ 0.06
RABGGTA-218ENST00000560777 E9PSI1 815 aa15.44■□□□□ 0.06
RABGGTA-218ENST00000560777 VAMP4O75379 141 aa15.44■□□□□ 0.06
RABGGTA-218ENST00000560777 TM4SF1P30408 202 aa15.44■□□□□ 0.06
RABGGTA-218ENST00000560777 TWISTNBQ3B726 338 aaPredicted RBP15.44■□□□□ 0.06
RABGGTA-218ENST00000560777 MMP10P09238 476 aa15.43■□□□□ 0.06
RABGGTA-218ENST00000560777 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
RABGGTA-218ENST00000560777 TRMT2AQ8IZ69 625 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-218ENST00000560777 DBF4Q9UBU7 674 aaPredicted RBP15.43■□□□□ 0.06
RABGGTA-218ENST00000560777 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
RABGGTA-218ENST00000560777 COPS6Q7L5N1 327 aa15.42■□□□□ 0.06
RABGGTA-218ENST00000560777 CHMP4AQ9BY43 222 aa15.42■□□□□ 0.06
RABGGTA-218ENST00000560777 PPP1R1BQ9UD71 204 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-218ENST00000560777 NFIXQ14938 502 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms