RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
HERC1-206ENST00000559996 ELL2O00472 640 aaPredicted RBP12.16□□□□□ -0.46
HERC1-206ENST00000559996 SYTL4Q96C24 671 aaPredicted RBP12.16□□□□□ -0.46
HERC1-206ENST00000559996 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
HERC1-206ENST00000559996 TRIM37O94972 964 aa12.15□□□□□ -0.46
HERC1-206ENST00000559996 TWISTNBQ3B726 338 aaPredicted RBP12.15□□□□□ -0.46
HERC1-206ENST00000559996 USP16Q9Y5T5 823 aa12.15□□□□□ -0.46
HERC1-206ENST00000559996 RARSP54136 660 aaKnown RBP12.14□□□□□ -0.47
HERC1-206ENST00000559996 EP400Q96L91 3159 aa12.14□□□□□ -0.47
HERC1-206ENST00000559996 BTAF1O14981 1849 aa12.14□□□□□ -0.47
HERC1-206ENST00000559996 PTCD1O75127 700 aaKnown RBP12.13□□□□□ -0.47
HERC1-206ENST00000559996 HOXB7P09629 217 aa12.13□□□□□ -0.47
HERC1-206ENST00000559996 CT47B1P0C2W7 299 aaPredicted RBP12.13□□□□□ -0.47
HERC1-206ENST00000559996 PDIA6Q15084 440 aa12.13□□□□□ -0.47
HERC1-206ENST00000559996 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
HERC1-206ENST00000559996 PROM2Q8N271 834 aa12.13□□□□□ -0.47
HERC1-206ENST00000559996 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
HERC1-206ENST00000559996 BCAR3O75815 825 aa12.12□□□□□ -0.47
HERC1-206ENST00000559996 SNRPA1P09661 255 aaKnown RBP12.12□□□□□ -0.47
HERC1-206ENST00000559996 BRPF1P55201 1214 aaPredicted RBP12.12□□□□□ -0.47
HERC1-206ENST00000559996 LRP10Q7Z4F1 713 aa12.12□□□□□ -0.47
HERC1-206ENST00000559996 SSH1Q8WYL5 1049 aa12.12□□□□□ -0.47
HERC1-206ENST00000559996 SOS1Q07889 1333 aaPredicted RBP12.11□□□□□ -0.47
HERC1-206ENST00000559996 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
HERC1-206ENST00000559996 C5P01031 1676 aa12.11□□□□□ -0.47
HERC1-206ENST00000559996 PALLDQ8WX93 1383 aa12.11□□□□□ -0.47
HERC1-206ENST00000559996 LOC102724428A0A0B4J2F2 783 aa12.11□□□□□ -0.47
HERC1-206ENST00000559996 SIK1P57059 783 aa12.11□□□□□ -0.47
HERC1-206ENST00000559996 ITPK1Q13572 414 aa12.11□□□□□ -0.47
HERC1-206ENST00000559996 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
HERC1-206ENST00000559996 MRPL50Q8N5N7 158 aaKnown RBP12.11□□□□□ -0.47
HERC1-206ENST00000559996 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
HERC1-206ENST00000559996 LRRC4BQ9NT99 713 aa12.11□□□□□ -0.47
HERC1-206ENST00000559996 RCAN3Q9UKA8 241 aa12.11□□□□□ -0.47
HERC1-206ENST00000559996 TCERG1O14776 1098 aaKnown RBP12.1□□□□□ -0.47
HERC1-206ENST00000559996 PLSCR1O15162 318 aa12.1□□□□□ -0.47
HERC1-206ENST00000559996 KCNQ4P56696 695 aa12.1□□□□□ -0.47
HERC1-206ENST00000559996 ALDH1L2Q3SY69 923 aa12.1□□□□□ -0.47
HERC1-206ENST00000559996 DNAJC10Q8IXB1 793 aa12.1□□□□□ -0.47
HERC1-206ENST00000559996 SMARCC1Q92922 1105 aaPredicted RBP12.1□□□□□ -0.47
HERC1-206ENST00000559996 ZNF428Q96B54 188 aa12.1□□□□□ -0.47
HERC1-206ENST00000559996 LY75O60449 1722 aa12.1□□□□□ -0.47
HERC1-206ENST00000559996 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
HERC1-206ENST00000559996 CICQ96RK0 1608 aaPredicted RBP12.09□□□□□ -0.47
HERC1-206ENST00000559996 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
HERC1-206ENST00000559996 CYP19A1P11511 503 aaPredicted RBP12.09□□□□□ -0.47
HERC1-206ENST00000559996 PROSER3Q2NL68 480 aa12.09□□□□□ -0.47
HERC1-206ENST00000559996 NBPF14Q5TI25 921 aa12.09□□□□□ -0.47
HERC1-206ENST00000559996 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
HERC1-206ENST00000559996 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
HERC1-206ENST00000559996 TJP1Q07157 1748 aa12.08□□□□□ -0.47
HERC1-206ENST00000559996 A1BGP04217 495 aa12.08□□□□□ -0.48
HERC1-206ENST00000559996 CENPBP07199 599 aaPredicted RBP12.08□□□□□ -0.48
HERC1-206ENST00000559996 EIF2S2P20042 333 aaKnown RBP12.08□□□□□ -0.48
HERC1-206ENST00000559996 ATP6V1AP38606 617 aa12.08□□□□□ -0.48
HERC1-206ENST00000559996 G2E3Q7L622 706 aa12.08□□□□□ -0.48
HERC1-206ENST00000559996 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
HERC1-206ENST00000559996 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.48
HERC1-206ENST00000559996 HDGFL1Q5TGJ6 251 aa12.07□□□□□ -0.48
HERC1-206ENST00000559996 CCDC30Q5VVM6 783 aa12.07□□□□□ -0.48
HERC1-206ENST00000559996 INTS5Q6P9B9 1019 aaKnown RBP12.07□□□□□ -0.48
HERC1-206ENST00000559996 ILDR2Q71H61 639 aa12.07□□□□□ -0.48
HERC1-206ENST00000559996 LINC00116Q8NCU8 138 aa12.07□□□□□ -0.48
HERC1-206ENST00000559996 CAMKK2Q96RR4 588 aa12.07□□□□□ -0.48
HERC1-206ENST00000559996 BCL2L13Q9BXK5 485 aa12.07□□□□□ -0.48
HERC1-206ENST00000559996 TEX13AQ9BXU3 409 aaPredicted RBP12.07□□□□□ -0.48
HERC1-206ENST00000559996 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
HERC1-206ENST00000559996 MYH14Q7Z406 1995 aaKnown RBP12.07□□□□□ -0.48
HERC1-206ENST00000559996 APBA3O96018 575 aa12.06□□□□□ -0.48
HERC1-206ENST00000559996 ANXA1P04083 346 aa12.06□□□□□ -0.48
HERC1-206ENST00000559996 PIP4K2AP48426 406 aaPredicted RBP12.06□□□□□ -0.48
HERC1-206ENST00000559996 PHAXQ9H814 394 aaKnown RBP12.06□□□□□ -0.48
HERC1-206ENST00000559996 CHPF2Q9P2E5 772 aa12.06□□□□□ -0.48
HERC1-206ENST00000559996 TNNQ9UQP3 1299 aa12.06□□□□□ -0.48
HERC1-206ENST00000559996 PLIN1O60240 522 aa12.05□□□□□ -0.48
HERC1-206ENST00000559996 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
HERC1-206ENST00000559996 DDX21Q9NR30 783 aaKnown RBP eCLIP12.05□□□□□ -0.48
HERC1-206ENST00000559996 COL5A3P25940 1745 aaPredicted RBP12.05□□□□□ -0.48
HERC1-206ENST00000559996 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
HERC1-206ENST00000559996 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
HERC1-206ENST00000559996 RREB1Q92766 1687 aa12.04□□□□□ -0.48
HERC1-206ENST00000559996 CRKLP46109 303 aaKnown RBP12.04□□□□□ -0.48
HERC1-206ENST00000559996 LHX8Q68G74 356 aa12.04□□□□□ -0.48
HERC1-206ENST00000559996 AMIGO3Q86WK7 504 aa12.04□□□□□ -0.48
HERC1-206ENST00000559996 DBF4Q9UBU7 674 aaPredicted RBP12.04□□□□□ -0.48
HERC1-206ENST00000559996 CCNL1Q9UK58 526 aaPredicted RBP12.04□□□□□ -0.48
HERC1-206ENST00000559996 NOB1Q9ULX3 412 aaKnown RBP12.04□□□□□ -0.48
HERC1-206ENST00000559996 ZBTB1Q9Y2K1 713 aa12.04□□□□□ -0.48
HERC1-206ENST00000559996 CACNA1FO60840 1977 aa12.03□□□□□ -0.48
HERC1-206ENST00000559996 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
HERC1-206ENST00000559996 EZH2Q15910 746 aaKnown RBP12.03□□□□□ -0.48
HERC1-206ENST00000559996 SLC27A3Q5K4L6 730 aa12.03□□□□□ -0.48
HERC1-206ENST00000559996 RC3H1Q5TC82 1133 aaKnown RBP12.03□□□□□ -0.48
HERC1-206ENST00000559996 SMC4Q9NTJ3 1288 aa12.03□□□□□ -0.48
HERC1-206ENST00000559996 ERBB4Q15303 1308 aa12.03□□□□□ -0.48
HERC1-206ENST00000559996 STARD3NLO95772 234 aa12.02□□□□□ -0.49
HERC1-206ENST00000559996 POTEIP0CG38 1075 aa12.02□□□□□ -0.49
HERC1-206ENST00000559996 EIF5P55010 431 aaKnown RBP12.02□□□□□ -0.49
HERC1-206ENST00000559996 RRP1P56182 461 aaKnown RBP12.02□□□□□ -0.49
HERC1-206ENST00000559996 C20orf194Q5TEA3 1177 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms