RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 STAP2Q9UGK3 403 aa19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 LIMCH1Q9UPQ0 1083 aa19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 SYT1P21579 422 aa19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 RTF1Q92541 710 aaKnown RBP19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 MBIPQ9NS73 344 aa19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 CWC15Q9P013 229 aaKnown RBP19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 SMC3Q9UQE7 1217 aa19.21■□□□□ 0.67
HMBOX1-212ENST00000558662 ADGRL3Q9HAR2 1447 aa19.2■□□□□ 0.66
HMBOX1-212ENST00000558662 UGGT1Q9NYU2 1555 aa19.2■□□□□ 0.66
HMBOX1-212ENST00000558662 CHRM1P11229 460 aaPredicted RBP19.2■□□□□ 0.66
HMBOX1-212ENST00000558662 FBXO38Q6PIJ6 1188 aa19.2■□□□□ 0.66
HMBOX1-212ENST00000558662 MRFAP1L1Q96HT8 127 aa19.2■□□□□ 0.66
HMBOX1-212ENST00000558662 SH2B1Q9NRF2 756 aaPredicted RBP19.2■□□□□ 0.66
HMBOX1-212ENST00000558662 ARGLU1Q9NWB6 273 aaPredicted RBP19.2■□□□□ 0.66
HMBOX1-212ENST00000558662 GEMIN8Q9NWZ8 242 aaKnown RBP19.2■□□□□ 0.66
HMBOX1-212ENST00000558662 MRVI1Q9Y6F6 885 aa19.2■□□□□ 0.66
HMBOX1-212ENST00000558662 TPM1P09493 284 aa19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 TSPYL6Q8N831 410 aa19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 TRIM5Q9C035 493 aa19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 ZNF215Q9UL58 517 aaPredicted RBP19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 TRIM6-TRIM34B2RNG4 842 aa19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 NPM1P06748 294 aaKnown RBP eCLIP19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 PRKAR2BP31323 418 aa19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 KCNJ6P48051 423 aa19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 HNRNPH2P55795 449 aaKnown RBP19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 TRIM34Q9BYJ4 488 aa19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 ANO2Q9NQ90 1003 aa19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 CHD2O14647 1828 aaKnown RBP19.19■□□□□ 0.66
HMBOX1-212ENST00000558662 TTC14Q96N46 770 aa19.18■□□□□ 0.66
HMBOX1-212ENST00000558662 RASSF4Q9H2L5 321 aa19.18■□□□□ 0.66
HMBOX1-212ENST00000558662 L2HGDHQ9H9P8 463 aa19.18■□□□□ 0.66
HMBOX1-212ENST00000558662 PALD1Q9ULE6 856 aa19.18■□□□□ 0.66
HMBOX1-212ENST00000558662 DLG5Q8TDM6 1919 aa19.18■□□□□ 0.66
HMBOX1-212ENST00000558662 FIBPO43427 364 aa19.17■□□□□ 0.66
HMBOX1-212ENST00000558662 KRT85P78386 507 aa19.17■□□□□ 0.66
HMBOX1-212ENST00000558662 FILIP1Q7Z7B0 1213 aa19.17■□□□□ 0.66
HMBOX1-212ENST00000558662 CBX8Q9HC52 389 aa19.17■□□□□ 0.66
HMBOX1-212ENST00000558662 CLIP2Q9UDT6 1046 aa19.17■□□□□ 0.66
HMBOX1-212ENST00000558662 FYB1O15117 783 aa19.16■□□□□ 0.66
HMBOX1-212ENST00000558662 RAD51AP2Q09MP3 1159 aa19.16■□□□□ 0.66
HMBOX1-212ENST00000558662 LRRC8AQ8IWT6 810 aa19.16■□□□□ 0.66
HMBOX1-212ENST00000558662 CFAP65Q6ZU64 1925 aaKnown RBP19.16■□□□□ 0.66
HMBOX1-212ENST00000558662 RIMS2Q9UQ26 1411 aa19.16■□□□□ 0.66
HMBOX1-212ENST00000558662 TNNT3P45378 269 aaPredicted RBP19.16■□□□□ 0.66
HMBOX1-212ENST00000558662 GSDMDP57764 484 aa19.16■□□□□ 0.66
HMBOX1-212ENST00000558662 SCAND2PQ9GZW5 306 aaPredicted RBP19.16■□□□□ 0.66
HMBOX1-212ENST00000558662 ERICH4A6NGS2 130 aa19.15■□□□□ 0.66
HMBOX1-212ENST00000558662 PLCD3Q8N3E9 789 aa19.15■□□□□ 0.66
HMBOX1-212ENST00000558662 SRRTQ9BXP5 876 aaKnown RBP19.15■□□□□ 0.66
HMBOX1-212ENST00000558662 PDCP20941 246 aa19.14■□□□□ 0.66
HMBOX1-212ENST00000558662 CACTINQ8WUQ7 758 aaKnown RBP19.14■□□□□ 0.66
HMBOX1-212ENST00000558662 TNMDQ9H2S6 317 aa19.14■□□□□ 0.66
HMBOX1-212ENST00000558662 BRMS1Q9HCU9 246 aa19.14■□□□□ 0.66
HMBOX1-212ENST00000558662 NPHP3Q7Z494 1330 aa19.14■□□□□ 0.65
HMBOX1-212ENST00000558662 MSH6P52701 1360 aa19.14■□□□□ 0.65
HMBOX1-212ENST00000558662 LRMPQ12912 555 aa19.14■□□□□ 0.65
HMBOX1-212ENST00000558662 ELF2Q15723 593 aa19.14■□□□□ 0.65
HMBOX1-212ENST00000558662 LRRCC1Q9C099 1032 aa19.14■□□□□ 0.65
HMBOX1-212ENST00000558662 PSD3Q9NYI0 1048 aa19.14■□□□□ 0.65
HMBOX1-212ENST00000558662 MTMR6Q9Y217 621 aa19.14■□□□□ 0.65
HMBOX1-212ENST00000558662 FHOD1Q9Y613 1164 aa19.14■□□□□ 0.65
HMBOX1-212ENST00000558662 CAMSAP1Q5T5Y3 1602 aa19.13■□□□□ 0.65
HMBOX1-212ENST00000558662 TTC21BQ7Z4L5 1316 aa19.13■□□□□ 0.65
HMBOX1-212ENST00000558662 CD163L1Q9NR16 1453 aa19.13■□□□□ 0.65
HMBOX1-212ENST00000558662 ARHGEF10O15013 1369 aa19.13■□□□□ 0.65
HMBOX1-212ENST00000558662 AATKQ6ZMQ8 1374 aa19.13■□□□□ 0.65
HMBOX1-212ENST00000558662 CCT4P50991 539 aaKnown RBP19.13■□□□□ 0.65
HMBOX1-212ENST00000558662 GOLGA6L1Q8N7Z2 621 aa19.13■□□□□ 0.65
HMBOX1-212ENST00000558662 RGS22Q8NE09 1264 aa19.13■□□□□ 0.65
HMBOX1-212ENST00000558662 CLSTN2Q9H4D0 955 aa19.13■□□□□ 0.65
HMBOX1-212ENST00000558662 NEXMIFQ5QGS0 1516 aa19.12■□□□□ 0.65
HMBOX1-212ENST00000558662 CCP110O43303 1012 aa19.12■□□□□ 0.65
HMBOX1-212ENST00000558662 HDGFL2Q7Z4V5 671 aaPredicted RBP19.12■□□□□ 0.65
HMBOX1-212ENST00000558662 LUZP1Q86V48 1076 aa19.12■□□□□ 0.65
HMBOX1-212ENST00000558662 C8orf58Q8NAV2 365 aa19.12■□□□□ 0.65
HMBOX1-212ENST00000558662 GGNBP2Q9H3C7 697 aa19.12■□□□□ 0.65
HMBOX1-212ENST00000558662 NAA30Q147X3 362 aaPredicted RBP19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 FOXD4L6Q3SYB3 417 aaPredicted RBP19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 ANO6Q4KMQ2 910 aa19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 CYB5RLQ6IPT4 315 aa19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 FOXD4L3Q6VB84 417 aaPredicted RBP19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 CCAR2Q8N163 923 aaKnown RBP19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 TM6SF1Q9BZW5 370 aa19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 ZNF446Q9NWS9 450 aa19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 IMPACTQ9P2X3 320 aa19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 TTC21AQ8NDW8 1320 aa19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 PIK3C2BO00750 1634 aa19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 ABCC3O15438 1527 aa19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 PNMA6AP0CW24 399 aaPredicted RBP19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 UPF3BQ9BZI7 483 aaKnown RBP19.11■□□□□ 0.65
HMBOX1-212ENST00000558662 PSDA5PKW4 1024 aaPredicted RBP19.1■□□□□ 0.65
HMBOX1-212ENST00000558662 CTAGE5O15320 804 aa19.1■□□□□ 0.65
HMBOX1-212ENST00000558662 NRDCO43847 1150 aa19.1■□□□□ 0.65
HMBOX1-212ENST00000558662 ZNF165P49910 485 aa19.1■□□□□ 0.65
HMBOX1-212ENST00000558662 DNM1Q05193 864 aaKnown RBP19.1■□□□□ 0.65
HMBOX1-212ENST00000558662 NOM1Q5C9Z4 860 aaKnown RBP19.1■□□□□ 0.65
HMBOX1-212ENST00000558662 IQUBQ8NA54 791 aa19.1■□□□□ 0.65
HMBOX1-212ENST00000558662 ZNF592Q92610 1267 aa19.1■□□□□ 0.65
HMBOX1-212ENST00000558662 ITSN1Q15811 1721 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 747.5 ms