RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 E9PSI1 815 aa9.66□□□□□ -0.86
SPG11-204ENST00000557866 FOXO3O43524 673 aa9.66□□□□□ -0.86
SPG11-204ENST00000557866 HMOX1P09601 288 aa9.66□□□□□ -0.86
SPG11-204ENST00000557866 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
SPG11-204ENST00000557866 RRP1P56182 461 aaKnown RBP9.66□□□□□ -0.86
SPG11-204ENST00000557866 SLF2Q8IX21 1173 aa9.66□□□□□ -0.86
SPG11-204ENST00000557866 ABTB2Q8N961 1025 aa9.66□□□□□ -0.86
SPG11-204ENST00000557866 RBM46Q8TBY0 533 aaKnown RBP9.66□□□□□ -0.86
SPG11-204ENST00000557866 STRCP1A6NGW2 1772 aa9.65□□□□□ -0.86
SPG11-204ENST00000557866 PIK3C2AO00443 1686 aa9.65□□□□□ -0.86
SPG11-204ENST00000557866 RNF40O75150 1001 aa9.65□□□□□ -0.86
SPG11-204ENST00000557866 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
SPG11-204ENST00000557866 PSME1Q06323 249 aa9.65□□□□□ -0.86
SPG11-204ENST00000557866 SWT1Q5T5J6 900 aaKnown RBP9.65□□□□□ -0.86
SPG11-204ENST00000557866 ERICH6BQ5W0A0 696 aa9.65□□□□□ -0.86
SPG11-204ENST00000557866 WDR63Q8IWG1 891 aa9.65□□□□□ -0.86
SPG11-204ENST00000557866 PHACTR3Q96KR7 559 aa9.65□□□□□ -0.86
SPG11-204ENST00000557866 MST1RQ04912 1400 aa9.65□□□□□ -0.87
SPG11-204ENST00000557866 ZNF335Q9H4Z2 1342 aaPredicted RBP9.64□□□□□ -0.87
SPG11-204ENST00000557866 ATF3P18847 181 aa9.64□□□□□ -0.87
SPG11-204ENST00000557866 PNNQ9H307 717 aaKnown RBP9.64□□□□□ -0.87
SPG11-204ENST00000557866 DCCP43146 1447 aa9.64□□□□□ -0.87
SPG11-204ENST00000557866 SBNO1A3KN83 1393 aa9.63□□□□□ -0.87
SPG11-204ENST00000557866 STRCQ7RTU9 1775 aa9.63□□□□□ -0.87
SPG11-204ENST00000557866 MAPK8IP3Q9UPT6 1336 aa9.63□□□□□ -0.87
SPG11-204ENST00000557866 PEAK1Q9H792 1746 aa9.63□□□□□ -0.87
SPG11-204ENST00000557866 RBM26Q5T8P6 1007 aaKnown RBP9.63□□□□□ -0.87
SPG11-204ENST00000557866 KRT28Q7Z3Y7 464 aa9.63□□□□□ -0.87
SPG11-204ENST00000557866 AEBP1Q8IUX7 1158 aa9.63□□□□□ -0.87
SPG11-204ENST00000557866 ADGRG1Q9Y653 693 aa9.63□□□□□ -0.87
SPG11-204ENST00000557866 LRRC7Q96NW7 1537 aa9.62□□□□□ -0.87
SPG11-204ENST00000557866 PLIN1O60240 522 aa9.62□□□□□ -0.87
SPG11-204ENST00000557866 DNAJB2P25686 324 aa9.62□□□□□ -0.87
SPG11-204ENST00000557866 AMPHP49418 695 aa9.62□□□□□ -0.87
SPG11-204ENST00000557866 RIPK4P57078 832 aa9.62□□□□□ -0.87
SPG11-204ENST00000557866 HIC1Q14526 733 aa9.62□□□□□ -0.87
SPG11-204ENST00000557866 NFE2L2Q16236 605 aa9.62□□□□□ -0.87
SPG11-204ENST00000557866 SULT6B1Q6IMI4 303 aa9.62□□□□□ -0.87
SPG11-204ENST00000557866 DDX17Q92841 729 aaKnown RBP9.62□□□□□ -0.87
SPG11-204ENST00000557866 FLT4P35916 1363 aa9.62□□□□□ -0.87
SPG11-204ENST00000557866 MAP2P11137 1827 aaKnown RBP9.61□□□□□ -0.87
SPG11-204ENST00000557866 HOXC9P31274 260 aa9.61□□□□□ -0.87
SPG11-204ENST00000557866 PPP4R2Q9NY27 417 aa9.61□□□□□ -0.87
SPG11-204ENST00000557866 MARF1Q9Y4F3 1742 aaKnown RBP9.61□□□□□ -0.87
SPG11-204ENST00000557866 USP19O94966 1318 aa9.6□□□□□ -0.87
SPG11-204ENST00000557866 OATP04181 439 aa9.6□□□□□ -0.87
SPG11-204ENST00000557866 TJAP1Q5JTD0 557 aa9.6□□□□□ -0.87
SPG11-204ENST00000557866 USP54Q70EL1 1684 aa9.6□□□□□ -0.87
SPG11-204ENST00000557866 NFAT5O94916 1531 aa9.6□□□□□ -0.87
SPG11-204ENST00000557866 ARHGEF10O15013 1369 aa9.6□□□□□ -0.87
SPG11-204ENST00000557866 MSH6P52701 1360 aa9.6□□□□□ -0.87
SPG11-204ENST00000557866 KIF24Q5T7B8 1368 aa9.6□□□□□ -0.87
SPG11-204ENST00000557866 IL16Q14005 1332 aa9.59□□□□□ -0.87
SPG11-204ENST00000557866 IGSF1Q8N6C5 1336 aa9.59□□□□□ -0.87
SPG11-204ENST00000557866 C20orf194Q5TEA3 1177 aa9.59□□□□□ -0.87
SPG11-204ENST00000557866 IP6K1Q92551 441 aa9.59□□□□□ -0.87
SPG11-204ENST00000557866 IL21Q9HBE4 155 aa9.59□□□□□ -0.87
SPG11-204ENST00000557866 FANCIQ9NVI1 1328 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 RCCD1A6NED2 376 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 BCAR3O75815 825 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 GCP02774 474 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 APLP1P51693 650 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 B4GALNT3Q6L9W6 998 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 BRINP3Q76B58 766 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 ARHGEF25Q86VW2 580 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 KCNH5Q8NCM2 988 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 EXOC6Q8TAG9 804 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 TSR2Q969E8 191 aaKnown RBP9.58□□□□□ -0.88
SPG11-204ENST00000557866 MTRQ99707 1265 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 THUMPD2Q9BTF0 503 aaKnown RBP9.58□□□□□ -0.88
SPG11-204ENST00000557866 PRR14Q9BWN1 585 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 TMEM134Q9H6X4 195 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 RTL1A6NKG5 1358 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 KDRP35968 1356 aa9.58□□□□□ -0.88
SPG11-204ENST00000557866 SLIT3O75094 1523 aa9.57□□□□□ -0.88
SPG11-204ENST00000557866 GNPATO15228 680 aa9.57□□□□□ -0.88
SPG11-204ENST00000557866 NEFMP07197 916 aa9.57□□□□□ -0.88
SPG11-204ENST00000557866 FAM161AQ3B820 660 aa9.57□□□□□ -0.88
SPG11-204ENST00000557866 LMOD2Q6P5Q4 547 aa9.57□□□□□ -0.88
SPG11-204ENST00000557866 LTV1Q96GA3 475 aaPredicted RBP9.57□□□□□ -0.88
SPG11-204ENST00000557866 MYH16Q9H6N6 1097 aa9.57□□□□□ -0.88
SPG11-204ENST00000557866 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
SPG11-204ENST00000557866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.56□□□□□ -0.88
SPG11-204ENST00000557866 FAM83GA6ND36 823 aa9.56□□□□□ -0.88
SPG11-204ENST00000557866 ZNF853P0CG23 659 aa9.56□□□□□ -0.88
SPG11-204ENST00000557866 RARSP54136 660 aaKnown RBP9.56□□□□□ -0.88
SPG11-204ENST00000557866 CRBNQ96SW2 442 aa9.56□□□□□ -0.88
SPG11-204ENST00000557866 TRPM3Q9HCF6 1732 aaPredicted RBP9.56□□□□□ -0.88
SPG11-204ENST00000557866 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
SPG11-204ENST00000557866 KIF1AQ12756 1690 aa9.55□□□□□ -0.88
SPG11-204ENST00000557866 EXOSC9Q06265 439 aaKnown RBP9.55□□□□□ -0.88
SPG11-204ENST00000557866 DCTN1Q14203 1278 aa9.55□□□□□ -0.88
SPG11-204ENST00000557866 MTHFSDQ2M296 383 aaKnown RBP9.55□□□□□ -0.88
SPG11-204ENST00000557866 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
SPG11-204ENST00000557866 SLAIN2Q9P270 581 aa9.55□□□□□ -0.88
SPG11-204ENST00000557866 SPATA31A3Q5VYP0 1347 aa9.55□□□□□ -0.88
SPG11-204ENST00000557866 PXDNQ92626 1479 aa9.54□□□□□ -0.88
SPG11-204ENST00000557866 ZBTB7CA1YPR0 619 aa9.54□□□□□ -0.88
SPG11-204ENST00000557866 TULP1O00294 542 aaPredicted RBP9.54□□□□□ -0.88
SPG11-204ENST00000557866 LMOD3Q0VAK6 560 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms