RNA–Protein interactions for RNA: ENST00000557181.5

APEX1-217, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-217ENST00000557181 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
APEX1-217ENST00000557181 TUBGCP6Q96RT7 1819 aa16.5■□□□□ 0.23
APEX1-217ENST00000557181 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
APEX1-217ENST00000557181 SSFA2P28290 1259 aa16.5■□□□□ 0.23
APEX1-217ENST00000557181 HNRNPUQ00839 825 aaKnown RBP eCLIP16.5■□□□□ 0.23
APEX1-217ENST00000557181 MYH16Q9H6N6 1097 aa16.5■□□□□ 0.23
APEX1-217ENST00000557181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.49■□□□□ 0.23
APEX1-217ENST00000557181 ADRA2BP18089 450 aa16.49■□□□□ 0.23
APEX1-217ENST00000557181 TRAPPC3LQ5T215 181 aa16.49■□□□□ 0.23
APEX1-217ENST00000557181 UBR3Q6ZT12 1888 aa16.49■□□□□ 0.23
APEX1-217ENST00000557181 PNPLA7Q6ZV29 1317 aa16.48■□□□□ 0.23
APEX1-217ENST00000557181 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
APEX1-217ENST00000557181 RPS6KA4O75676 772 aa16.48■□□□□ 0.23
APEX1-217ENST00000557181 ZNF853P0CG23 659 aa16.48■□□□□ 0.23
APEX1-217ENST00000557181 RFC4P35249 363 aa16.48■□□□□ 0.23
APEX1-217ENST00000557181 ARXQ96QS3 562 aa16.48■□□□□ 0.23
APEX1-217ENST00000557181 A0A087WZG4 1122 aa16.47■□□□□ 0.23
APEX1-217ENST00000557181 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
APEX1-217ENST00000557181 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
APEX1-217ENST00000557181 GOLGA2Q08379 1002 aa16.47■□□□□ 0.23
APEX1-217ENST00000557181 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
APEX1-217ENST00000557181 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
APEX1-217ENST00000557181 CHMP4AQ9BY43 222 aa16.47■□□□□ 0.23
APEX1-217ENST00000557181 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
APEX1-217ENST00000557181 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
APEX1-217ENST00000557181 MYH14Q7Z406 1995 aaKnown RBP16.46■□□□□ 0.23
APEX1-217ENST00000557181 A1BGP04217 495 aa16.46■□□□□ 0.23
APEX1-217ENST00000557181 COL23A1Q86Y22 540 aaPredicted RBP16.46■□□□□ 0.23
APEX1-217ENST00000557181 SLC16A10Q8TF71 515 aa16.46■□□□□ 0.23
APEX1-217ENST00000557181 ZPR1O75312 459 aa16.45■□□□□ 0.22
APEX1-217ENST00000557181 ZBTB7AO95365 584 aa16.45■□□□□ 0.22
APEX1-217ENST00000557181 HOXB7P09629 217 aa16.45■□□□□ 0.22
APEX1-217ENST00000557181 COL15A1P39059 1388 aa16.45■□□□□ 0.22
APEX1-217ENST00000557181 CASZ1Q86V15 1759 aa16.45■□□□□ 0.22
APEX1-217ENST00000557181 SOS1Q07889 1333 aaPredicted RBP16.45■□□□□ 0.22
APEX1-217ENST00000557181 FANCIQ9NVI1 1328 aa16.45■□□□□ 0.22
APEX1-217ENST00000557181 E9PSI1 815 aa16.44■□□□□ 0.22
APEX1-217ENST00000557181 ELL2O00472 640 aaPredicted RBP16.44■□□□□ 0.22
APEX1-217ENST00000557181 IL6STP40189 918 aaPredicted RBP16.44■□□□□ 0.22
APEX1-217ENST00000557181 KRT24Q2M2I5 525 aa16.44■□□□□ 0.22
APEX1-217ENST00000557181 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
APEX1-217ENST00000557181 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
APEX1-217ENST00000557181 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
APEX1-217ENST00000557181 MTFR1LQ9H019 292 aa16.44■□□□□ 0.22
APEX1-217ENST00000557181 SPON1Q9HCB6 807 aa16.44■□□□□ 0.22
APEX1-217ENST00000557181 ERBB4Q15303 1308 aa16.44■□□□□ 0.22
APEX1-217ENST00000557181 PIP4K2AP48426 406 aaPredicted RBP16.43■□□□□ 0.22
APEX1-217ENST00000557181 SMIM5Q71RC9 77 aa16.43■□□□□ 0.22
APEX1-217ENST00000557181 ARHGEF1Q92888 912 aaKnown RBP16.43■□□□□ 0.22
APEX1-217ENST00000557181 PDGFDQ9GZP0 370 aaPredicted RBP16.43■□□□□ 0.22
APEX1-217ENST00000557181 MYL6BP14649 208 aa16.42■□□□□ 0.22
APEX1-217ENST00000557181 POLD1P28340 1107 aa16.42■□□□□ 0.22
APEX1-217ENST00000557181 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
APEX1-217ENST00000557181 ZNF521Q96K83 1311 aa16.42■□□□□ 0.22
APEX1-217ENST00000557181 TWISTNBQ3B726 338 aaPredicted RBP16.41■□□□□ 0.22
APEX1-217ENST00000557181 MSL1Q68DK7 614 aa16.41■□□□□ 0.22
APEX1-217ENST00000557181 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
APEX1-217ENST00000557181 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
APEX1-217ENST00000557181 C4AP0C0L4 1744 aa16.41■□□□□ 0.22
APEX1-217ENST00000557181 EIF5P55010 431 aaKnown RBP16.4■□□□□ 0.22
APEX1-217ENST00000557181 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
APEX1-217ENST00000557181 KIF6Q6ZMV9 814 aa16.4■□□□□ 0.22
APEX1-217ENST00000557181 DZIP3Q86Y13 1208 aaKnown RBP16.4■□□□□ 0.22
APEX1-217ENST00000557181 C8orf58Q8NAV2 365 aa16.4■□□□□ 0.22
APEX1-217ENST00000557181 STK31Q9BXU1 1019 aa16.4■□□□□ 0.22
APEX1-217ENST00000557181 EXOSC9Q06265 439 aaKnown RBP16.39■□□□□ 0.21
APEX1-217ENST00000557181 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
APEX1-217ENST00000557181 NARFQ9UHQ1 456 aa16.39■□□□□ 0.21
APEX1-217ENST00000557181 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
APEX1-217ENST00000557181 USP42Q9H9J4 1324 aaKnown RBP16.39■□□□□ 0.21
APEX1-217ENST00000557181 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
APEX1-217ENST00000557181 USPL1Q5W0Q7 1092 aa16.38■□□□□ 0.21
APEX1-217ENST00000557181 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
APEX1-217ENST00000557181 NLGN1Q8N2Q7 840 aa16.38■□□□□ 0.21
APEX1-217ENST00000557181 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
APEX1-217ENST00000557181 SPINK5Q9NQ38 1064 aaPredicted RBP16.38■□□□□ 0.21
APEX1-217ENST00000557181 CHPF2Q9P2E5 772 aa16.38■□□□□ 0.21
APEX1-217ENST00000557181 SRP68Q9UHB9 627 aaKnown RBP16.38■□□□□ 0.21
APEX1-217ENST00000557181 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
APEX1-217ENST00000557181 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
APEX1-217ENST00000557181 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
APEX1-217ENST00000557181 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
APEX1-217ENST00000557181 TSPYL6Q8N831 410 aa16.36■□□□□ 0.21
APEX1-217ENST00000557181 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
APEX1-217ENST00000557181 HYPKQ9NX55 129 aa16.36■□□□□ 0.21
APEX1-217ENST00000557181 SCN7AQ01118 1682 aa16.35■□□□□ 0.21
APEX1-217ENST00000557181 ANXA1P04083 346 aa16.35■□□□□ 0.21
APEX1-217ENST00000557181 GYS1P13807 737 aa16.35■□□□□ 0.21
APEX1-217ENST00000557181 AIMP1Q12904 312 aaKnown RBP16.35■□□□□ 0.21
APEX1-217ENST00000557181 LRP5O75197 1615 aa16.34■□□□□ 0.21
APEX1-217ENST00000557181 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
APEX1-217ENST00000557181 PARP3Q9Y6F1 533 aa16.34■□□□□ 0.21
APEX1-217ENST00000557181 NPHP1O15259 732 aa16.33■□□□□ 0.2
APEX1-217ENST00000557181 MMP10P09238 476 aa16.33■□□□□ 0.2
APEX1-217ENST00000557181 FKBP8Q14318 412 aa16.33■□□□□ 0.2
APEX1-217ENST00000557181 PROSER3Q2NL68 480 aa16.33■□□□□ 0.2
APEX1-217ENST00000557181 BICDL1Q6ZP65 573 aa16.33■□□□□ 0.2
APEX1-217ENST00000557181 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
APEX1-217ENST00000557181 YTHDC1Q96MU7 727 aaKnown RBP16.33■□□□□ 0.2
APEX1-217ENST00000557181 ZBTB3Q9H5J0 574 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms