RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 FLAD1Q8NFF5 587 aa26.33■■□□□ 1.81
RCCD1-205ENST00000556333 CCDC87Q9NVE4 849 aa26.33■■□□□ 1.81
RCCD1-205ENST00000556333 C4AP0C0L4 1744 aa26.32■■□□□ 1.8
RCCD1-205ENST00000556333 EIF4A1P60842 406 aaKnown RBP26.32■■□□□ 1.8
RCCD1-205ENST00000556333 CFAP44Q96MT7 982 aa26.32■■□□□ 1.8
RCCD1-205ENST00000556333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.31■■□□□ 1.8
RCCD1-205ENST00000556333 PRAMEF22A3QJZ6 481 aa26.31■■□□□ 1.8
RCCD1-205ENST00000556333 CHL1O00533 1208 aa26.31■■□□□ 1.8
RCCD1-205ENST00000556333 SSFA2P28290 1259 aa26.31■■□□□ 1.8
RCCD1-205ENST00000556333 COL23A1Q86Y22 540 aaPredicted RBP26.31■■□□□ 1.8
RCCD1-205ENST00000556333 RPS6KA4O75676 772 aa26.3■■□□□ 1.8
RCCD1-205ENST00000556333 ZBTB7AO95365 584 aa26.3■■□□□ 1.8
RCCD1-205ENST00000556333 GNAI1P63096 354 aa26.3■■□□□ 1.8
RCCD1-205ENST00000556333 NCBP3Q53F19 620 aaKnown RBP26.3■■□□□ 1.8
RCCD1-205ENST00000556333 AMIGO3Q86WK7 504 aa26.3■■□□□ 1.8
RCCD1-205ENST00000556333 USP16Q9Y5T5 823 aa26.3■■□□□ 1.8
RCCD1-205ENST00000556333 TRAPPC3LQ5T215 181 aa26.29■■□□□ 1.8
RCCD1-205ENST00000556333 INTS5Q6P9B9 1019 aaKnown RBP26.29■■□□□ 1.8
RCCD1-205ENST00000556333 IFT57Q9NWB7 429 aa26.29■■□□□ 1.8
RCCD1-205ENST00000556333 CANXP27824 592 aaKnown RBP26.28■■□□□ 1.8
RCCD1-205ENST00000556333 NGEFQ8N5V2 710 aa26.28■■□□□ 1.8
RCCD1-205ENST00000556333 ZBTB1Q9Y2K1 713 aa26.28■■□□□ 1.8
RCCD1-205ENST00000556333 MBIPQ9NS73 344 aa26.27■■□□□ 1.8
RCCD1-205ENST00000556333 ZNF330Q9Y3S2 320 aaPredicted RBP26.27■■□□□ 1.8
RCCD1-205ENST00000556333 GIGYF1O75420 1035 aaPredicted RBP26.26■■□□□ 1.79
RCCD1-205ENST00000556333 ATF5Q9Y2D1 282 aaPredicted RBP26.26■■□□□ 1.79
RCCD1-205ENST00000556333 A1BGP04217 495 aa26.25■■□□□ 1.79
RCCD1-205ENST00000556333 SLC16A10Q8TF71 515 aa26.25■■□□□ 1.79
RCCD1-205ENST00000556333 MTFR1LQ9H019 292 aa26.25■■□□□ 1.79
RCCD1-205ENST00000556333 ZNF853P0CG23 659 aa26.24■■□□□ 1.79
RCCD1-205ENST00000556333 ADRA2BP18089 450 aa26.24■■□□□ 1.79
RCCD1-205ENST00000556333 RFC4P35249 363 aa26.24■■□□□ 1.79
RCCD1-205ENST00000556333 NPM2Q86SE8 214 aaKnown RBP26.24■■□□□ 1.79
RCCD1-205ENST00000556333 WDR63Q8IWG1 891 aa26.23■■□□□ 1.79
RCCD1-205ENST00000556333 ARHGEF1Q92888 912 aaKnown RBP26.23■■□□□ 1.79
RCCD1-205ENST00000556333 COL15A1P39059 1388 aa26.22■■□□□ 1.79
RCCD1-205ENST00000556333 SOS1Q07889 1333 aaPredicted RBP26.22■■□□□ 1.79
RCCD1-205ENST00000556333 PIP4K2AP48426 406 aaPredicted RBP26.22■■□□□ 1.79
RCCD1-205ENST00000556333 KRT24Q2M2I5 525 aa26.22■■□□□ 1.79
RCCD1-205ENST00000556333 IL16Q14005 1332 aa26.21■■□□□ 1.79
RCCD1-205ENST00000556333 EIF2S2P20042 333 aaKnown RBP26.21■■□□□ 1.79
RCCD1-205ENST00000556333 MSL1Q68DK7 614 aa26.21■■□□□ 1.79
RCCD1-205ENST00000556333 TSR2Q969E8 191 aaKnown RBP26.21■■□□□ 1.79
RCCD1-205ENST00000556333 COL24A1Q17RW2 1714 aa26.2■■□□□ 1.79
RCCD1-205ENST00000556333 ARXQ96QS3 562 aa26.2■■□□□ 1.78
RCCD1-205ENST00000556333 IL6STP40189 918 aaPredicted RBP26.18■■□□□ 1.78
RCCD1-205ENST00000556333 NECTIN2Q92692 538 aa26.18■■□□□ 1.78
RCCD1-205ENST00000556333 ZPR1O75312 459 aa26.17■■□□□ 1.78
RCCD1-205ENST00000556333 A0A087WZG4 1122 aa26.16■■□□□ 1.78
RCCD1-205ENST00000556333 ELL2O00472 640 aaPredicted RBP26.16■■□□□ 1.78
RCCD1-205ENST00000556333 POLD1P28340 1107 aa26.16■■□□□ 1.78
RCCD1-205ENST00000556333 EIF5P55010 431 aaKnown RBP26.16■■□□□ 1.78
RCCD1-205ENST00000556333 DUSP27Q5VZP5 1158 aa26.16■■□□□ 1.78
RCCD1-205ENST00000556333 SRP68Q9UHB9 627 aaKnown RBP26.16■■□□□ 1.78
RCCD1-205ENST00000556333 MYL6BP14649 208 aa26.15■■□□□ 1.78
RCCD1-205ENST00000556333 BCORQ6W2J9 1755 aa26.15■■□□□ 1.78
RCCD1-205ENST00000556333 USP42Q9H9J4 1324 aaKnown RBP26.14■■□□□ 1.77
RCCD1-205ENST00000556333 SCN7AQ01118 1682 aa26.13■■□□□ 1.77
RCCD1-205ENST00000556333 NBPF26B4DH59 902 aa26.13■■□□□ 1.77
RCCD1-205ENST00000556333 HDGFL1Q5TGJ6 251 aa26.13■■□□□ 1.77
RCCD1-205ENST00000556333 USPL1Q5W0Q7 1092 aa26.13■■□□□ 1.77
RCCD1-205ENST00000556333 NBPF10Q6P3W6 841 aaKnown RBP26.13■■□□□ 1.77
RCCD1-205ENST00000556333 NBPF15Q8N660 670 aa26.13■■□□□ 1.77
RCCD1-205ENST00000556333 MYH16Q9H6N6 1097 aa26.13■■□□□ 1.77
RCCD1-205ENST00000556333 TBC1D2BQ9UPU7 963 aa26.13■■□□□ 1.77
RCCD1-205ENST00000556333 FANCIQ9NVI1 1328 aa26.13■■□□□ 1.77
RCCD1-205ENST00000556333 HOXB7P09629 217 aa26.12■■□□□ 1.77
RCCD1-205ENST00000556333 PTGER2P43116 358 aa26.12■■□□□ 1.77
RCCD1-205ENST00000556333 GOLGA2Q08379 1002 aa26.12■■□□□ 1.77
RCCD1-205ENST00000556333 NARFQ9UHQ1 456 aa26.12■■□□□ 1.77
RCCD1-205ENST00000556333 ZNF521Q96K83 1311 aa26.12■■□□□ 1.77
RCCD1-205ENST00000556333 GYS1P13807 737 aa26.11■■□□□ 1.77
RCCD1-205ENST00000556333 HNRNPUQ00839 825 aaKnown RBP eCLIP26.11■■□□□ 1.77
RCCD1-205ENST00000556333 DZIP3Q86Y13 1208 aaKnown RBP26.11■■□□□ 1.77
RCCD1-205ENST00000556333 C8orf58Q8NAV2 365 aa26.11■■□□□ 1.77
RCCD1-205ENST00000556333 SPINK5Q9NQ38 1064 aaPredicted RBP26.11■■□□□ 1.77
RCCD1-205ENST00000556333 ERBB4Q15303 1308 aa26.11■■□□□ 1.77
RCCD1-205ENST00000556333 NLGN1Q8N2Q7 840 aa26.1■■□□□ 1.77
RCCD1-205ENST00000556333 ANXA1P04083 346 aa26.08■■□□□ 1.77
RCCD1-205ENST00000556333 TSPYL6Q8N831 410 aa26.08■■□□□ 1.77
RCCD1-205ENST00000556333 SGIP1Q9BQI5 828 aa26.08■■□□□ 1.77
RCCD1-205ENST00000556333 NUP98P52948 1817 aa26.08■■□□□ 1.77
RCCD1-205ENST00000556333 TWISTNBQ3B726 338 aaPredicted RBP26.07■■□□□ 1.76
RCCD1-205ENST00000556333 EXOSC9Q06265 439 aaKnown RBP26.06■■□□□ 1.76
RCCD1-205ENST00000556333 FKBP8Q14318 412 aa26.06■■□□□ 1.76
RCCD1-205ENST00000556333 KLHL34Q8N239 644 aa26.06■■□□□ 1.76
RCCD1-205ENST00000556333 CHPF2Q9P2E5 772 aa26.06■■□□□ 1.76
RCCD1-205ENST00000556333 MMP10P09238 476 aa26.05■■□□□ 1.76
RCCD1-205ENST00000556333 PROSER3Q2NL68 480 aa26.05■■□□□ 1.76
RCCD1-205ENST00000556333 E9PSI1 815 aa26.04■■□□□ 1.76
RCCD1-205ENST00000556333 PDIA6Q15084 440 aa26.04■■□□□ 1.76
RCCD1-205ENST00000556333 KIF6Q6ZMV9 814 aa26.04■■□□□ 1.76
RCCD1-205ENST00000556333 ZNF784Q8NCA9 323 aaPredicted RBP26.04■■□□□ 1.76
RCCD1-205ENST00000556333 CHMP4AQ9BY43 222 aa26.04■■□□□ 1.76
RCCD1-205ENST00000556333 DDX21Q9NR30 783 aaKnown RBP eCLIP26.04■■□□□ 1.76
RCCD1-205ENST00000556333 DBF4Q9UBU7 674 aaPredicted RBP26.04■■□□□ 1.76
RCCD1-205ENST00000556333 CACNA1FO60840 1977 aa26.04■■□□□ 1.76
RCCD1-205ENST00000556333 AFDNP55196 1824 aaKnown RBP26.03■■□□□ 1.76
RCCD1-205ENST00000556333 CCDC30Q5VVM6 783 aa26.03■■□□□ 1.76
RCCD1-205ENST00000556333 BICDL1Q6ZP65 573 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms