RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 RRP7AQ9Y3A4 280 aaKnown RBP11.86□□□□□ -0.51
CHD8-210ENST00000555962 PALLDQ8WX93 1383 aa11.86□□□□□ -0.51
CHD8-210ENST00000555962 ZNF831Q5JPB2 1677 aa11.86□□□□□ -0.51
CHD8-210ENST00000555962 COL5A3P25940 1745 aaPredicted RBP11.86□□□□□ -0.51
CHD8-210ENST00000555962 TMPOP42166 694 aaKnown RBP11.85□□□□□ -0.51
CHD8-210ENST00000555962 KCNQ4P56696 695 aa11.85□□□□□ -0.51
CHD8-210ENST00000555962 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
CHD8-210ENST00000555962 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
CHD8-210ENST00000555962 ATG3Q9NT62 314 aa11.85□□□□□ -0.51
CHD8-210ENST00000555962 LRRC4BQ9NT99 713 aa11.85□□□□□ -0.51
CHD8-210ENST00000555962 MYH14Q7Z406 1995 aaKnown RBP11.85□□□□□ -0.51
CHD8-210ENST00000555962 CCER2I3L3R5 266 aa11.84□□□□□ -0.51
CHD8-210ENST00000555962 HTATSF1O43719 755 aaKnown RBP11.84□□□□□ -0.51
CHD8-210ENST00000555962 RIPK4P57078 832 aa11.84□□□□□ -0.51
CHD8-210ENST00000555962 NEUROD2Q15784 382 aa11.84□□□□□ -0.51
CHD8-210ENST00000555962 THUMPD2Q9BTF0 503 aaKnown RBP11.84□□□□□ -0.51
CHD8-210ENST00000555962 CICQ96RK0 1608 aaPredicted RBP11.84□□□□□ -0.51
CHD8-210ENST00000555962 QSER1Q2KHR3 1735 aa11.83□□□□□ -0.52
CHD8-210ENST00000555962 KCPQ6ZWJ8 1503 aa11.83□□□□□ -0.52
CHD8-210ENST00000555962 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
CHD8-210ENST00000555962 APAF1O14727 1248 aa11.83□□□□□ -0.52
CHD8-210ENST00000555962 FAM9BQ8IZU0 186 aa11.83□□□□□ -0.52
CHD8-210ENST00000555962 RTF1Q92541 710 aaKnown RBP11.83□□□□□ -0.52
CHD8-210ENST00000555962 SMARCC1Q92922 1105 aaPredicted RBP11.83□□□□□ -0.52
CHD8-210ENST00000555962 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
CHD8-210ENST00000555962 UBR3Q6ZT12 1888 aa11.83□□□□□ -0.52
CHD8-210ENST00000555962 TEFQ10587 303 aa11.82□□□□□ -0.52
CHD8-210ENST00000555962 SLC39A6Q13433 755 aa11.82□□□□□ -0.52
CHD8-210ENST00000555962 SLC4A9Q96Q91 983 aa11.82□□□□□ -0.52
CHD8-210ENST00000555962 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
CHD8-210ENST00000555962 TRIM35Q9UPQ4 493 aa11.82□□□□□ -0.52
CHD8-210ENST00000555962 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
CHD8-210ENST00000555962 WDR70Q9NW82 654 aa11.81□□□□□ -0.52
CHD8-210ENST00000555962 CCNL1Q9UK58 526 aaPredicted RBP11.81□□□□□ -0.52
CHD8-210ENST00000555962 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
CHD8-210ENST00000555962 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
CHD8-210ENST00000555962 KCNQ3O43525 872 aa11.8□□□□□ -0.52
CHD8-210ENST00000555962 SIK1P57059 783 aa11.8□□□□□ -0.52
CHD8-210ENST00000555962 ITPK1Q13572 414 aa11.8□□□□□ -0.52
CHD8-210ENST00000555962 PCDHB8Q9UN66 801 aa11.8□□□□□ -0.52
CHD8-210ENST00000555962 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
CHD8-210ENST00000555962 CASZ1Q86V15 1759 aa11.79□□□□□ -0.52
CHD8-210ENST00000555962 PTCD1O75127 700 aaKnown RBP11.79□□□□□ -0.52
CHD8-210ENST00000555962 ZNF827Q17R98 1081 aa11.79□□□□□ -0.52
CHD8-210ENST00000555962 MIS18AQ9NYP9 233 aa11.79□□□□□ -0.52
CHD8-210ENST00000555962 LAMB4A4D0S4 1761 aa11.78□□□□□ -0.52
CHD8-210ENST00000555962 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
CHD8-210ENST00000555962 BTBD11A6QL63 1104 aa11.78□□□□□ -0.52
CHD8-210ENST00000555962 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
CHD8-210ENST00000555962 LMOD3Q0VAK6 560 aa11.78□□□□□ -0.52
CHD8-210ENST00000555962 TAF7Q15545 349 aaPredicted RBP11.78□□□□□ -0.52
CHD8-210ENST00000555962 ZNF790Q6PG37 636 aa11.78□□□□□ -0.52
CHD8-210ENST00000555962 LINC00116Q8NCU8 138 aa11.78□□□□□ -0.52
CHD8-210ENST00000555962 R3HDM1Q15032 1099 aaKnown RBP11.77□□□□□ -0.53
CHD8-210ENST00000555962 NBPF14Q5TI25 921 aa11.77□□□□□ -0.53
CHD8-210ENST00000555962 ZNF496Q96IT1 587 aaPredicted RBP11.77□□□□□ -0.53
CHD8-210ENST00000555962 SLC15A2Q16348 729 aa11.76□□□□□ -0.53
CHD8-210ENST00000555962 TTC5Q8N0Z6 440 aa11.76□□□□□ -0.53
CHD8-210ENST00000555962 C4AP0C0L4 1744 aa11.76□□□□□ -0.53
CHD8-210ENST00000555962 PSEN1P49768 467 aa11.75□□□□□ -0.53
CHD8-210ENST00000555962 DNAJC10Q8IXB1 793 aa11.75□□□□□ -0.53
CHD8-210ENST00000555962 PDGFDQ9GZP0 370 aaPredicted RBP11.75□□□□□ -0.53
CHD8-210ENST00000555962 STK32BQ9NY57 414 aa11.75□□□□□ -0.53
CHD8-210ENST00000555962 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
CHD8-210ENST00000555962 HEG1Q9ULI3 1381 aa11.75□□□□□ -0.53
CHD8-210ENST00000555962 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
CHD8-210ENST00000555962 SMIM5Q71RC9 77 aa11.74□□□□□ -0.53
CHD8-210ENST00000555962 AMIGO3Q86WK7 504 aa11.74□□□□□ -0.53
CHD8-210ENST00000555962 KCNV2Q8TDN2 545 aa11.74□□□□□ -0.53
CHD8-210ENST00000555962 FMNL2Q96PY5 1086 aa11.74□□□□□ -0.53
CHD8-210ENST00000555962 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
CHD8-210ENST00000555962 CHL1O00533 1208 aa11.73□□□□□ -0.53
CHD8-210ENST00000555962 ZNF853P0CG23 659 aa11.73□□□□□ -0.53
CHD8-210ENST00000555962 COL24A1Q17RW2 1714 aa11.73□□□□□ -0.53
CHD8-210ENST00000555962 WWC1Q8IX03 1113 aa11.73□□□□□ -0.53
CHD8-210ENST00000555962 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
CHD8-210ENST00000555962 TSPYL4Q9UJ04 414 aa11.73□□□□□ -0.53
CHD8-210ENST00000555962 PNPLA7Q6ZV29 1317 aa11.72□□□□□ -0.53
CHD8-210ENST00000555962 CNTNAP4Q9C0A0 1308 aa11.72□□□□□ -0.53
CHD8-210ENST00000555962 CYP19A1P11511 503 aaPredicted RBP11.72□□□□□ -0.53
CHD8-210ENST00000555962 CRKLP46109 303 aaKnown RBP11.72□□□□□ -0.53
CHD8-210ENST00000555962 EIF4A1P60842 406 aaKnown RBP11.72□□□□□ -0.53
CHD8-210ENST00000555962 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
CHD8-210ENST00000555962 BABAM1Q9NWV8 329 aa11.72□□□□□ -0.53
CHD8-210ENST00000555962 TFCP2L1Q9NZI6 479 aa11.72□□□□□ -0.53
CHD8-210ENST00000555962 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
CHD8-210ENST00000555962 GNPATO15228 680 aa11.71□□□□□ -0.53
CHD8-210ENST00000555962 RC3H1Q5TC82 1133 aaKnown RBP11.71□□□□□ -0.53
CHD8-210ENST00000555962 INTS5Q6P9B9 1019 aaKnown RBP11.71□□□□□ -0.53
CHD8-210ENST00000555962 AK7Q96M32 723 aa11.71□□□□□ -0.53
CHD8-210ENST00000555962 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
CHD8-210ENST00000555962 SNRPA1P09661 255 aaKnown RBP11.7□□□□□ -0.54
CHD8-210ENST00000555962 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
CHD8-210ENST00000555962 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
CHD8-210ENST00000555962 COL23A1Q86Y22 540 aaPredicted RBP11.7□□□□□ -0.54
CHD8-210ENST00000555962 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
CHD8-210ENST00000555962 IFT57Q9NWB7 429 aa11.7□□□□□ -0.54
CHD8-210ENST00000555962 ZNF521Q96K83 1311 aa11.69□□□□□ -0.54
CHD8-210ENST00000555962 GIGYF1O75420 1035 aaPredicted RBP11.69□□□□□ -0.54
CHD8-210ENST00000555962 PHF14O94880 888 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms