RNA–Protein interactions for RNA: ENST00000555088.5

GSKIP-204, Transcript of GSK3B interacting protein, humanhuman

TSL 5

Gene GSKIP, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-204ENST00000555088 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.2
GSKIP-204ENST00000555088 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
GSKIP-204ENST00000555088 KCPQ6ZWJ8 1503 aa16.26■□□□□ 0.19
GSKIP-204ENST00000555088 KCNQ3O43525 872 aa16.26■□□□□ 0.19
GSKIP-204ENST00000555088 GIGYF1O75420 1035 aaPredicted RBP16.26■□□□□ 0.19
GSKIP-204ENST00000555088 BAG6P46379 1132 aa16.26■□□□□ 0.19
GSKIP-204ENST00000555088 ILDR2Q71H61 639 aa16.26■□□□□ 0.19
GSKIP-204ENST00000555088 PTCD1O75127 700 aaKnown RBP16.25■□□□□ 0.19
GSKIP-204ENST00000555088 PAPPAQ13219 1627 aa16.25■□□□□ 0.19
GSKIP-204ENST00000555088 SIPA1L3O60292 1781 aaPredicted RBP16.24■□□□□ 0.19
GSKIP-204ENST00000555088 DLG5Q8TDM6 1919 aa16.24■□□□□ 0.19
GSKIP-204ENST00000555088 UPF1Q92900 1129 aaKnown RBP eCLIP16.24■□□□□ 0.19
GSKIP-204ENST00000555088 ZNF428Q96B54 188 aa16.24■□□□□ 0.19
GSKIP-204ENST00000555088 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
GSKIP-204ENST00000555088 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
GSKIP-204ENST00000555088 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
GSKIP-204ENST00000555088 SLC4A9Q96Q91 983 aa16.23■□□□□ 0.19
GSKIP-204ENST00000555088 CAMKK2Q96RR4 588 aa16.23■□□□□ 0.19
GSKIP-204ENST00000555088 STARD3NLO95772 234 aa16.22■□□□□ 0.19
GSKIP-204ENST00000555088 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
GSKIP-204ENST00000555088 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
GSKIP-204ENST00000555088 C8orf58Q8NAV2 365 aa16.22■□□□□ 0.19
GSKIP-204ENST00000555088 EP400Q96L91 3159 aa16.22■□□□□ 0.19
GSKIP-204ENST00000555088 ERBB4Q15303 1308 aa16.21■□□□□ 0.19
GSKIP-204ENST00000555088 SPDYE4A6NLX3 237 aa16.21■□□□□ 0.19
GSKIP-204ENST00000555088 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
GSKIP-204ENST00000555088 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.18
GSKIP-204ENST00000555088 RC3H1Q5TC82 1133 aaKnown RBP16.2■□□□□ 0.18
GSKIP-204ENST00000555088 PROM2Q8N271 834 aa16.2■□□□□ 0.18
GSKIP-204ENST00000555088 CICQ96RK0 1608 aaPredicted RBP16.19■□□□□ 0.18
GSKIP-204ENST00000555088 ZNF831Q5JPB2 1677 aa16.19■□□□□ 0.18
GSKIP-204ENST00000555088 VAMP4O75379 141 aa16.19■□□□□ 0.18
GSKIP-204ENST00000555088 CYP19A1P11511 503 aaPredicted RBP16.19■□□□□ 0.18
GSKIP-204ENST00000555088 ITPK1Q13572 414 aa16.19■□□□□ 0.18
GSKIP-204ENST00000555088 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
GSKIP-204ENST00000555088 DNAJC10Q8IXB1 793 aa16.19■□□□□ 0.18
GSKIP-204ENST00000555088 TNS1Q9HBL0 1735 aaKnown RBP16.19■□□□□ 0.18
GSKIP-204ENST00000555088 CNTNAP4Q9C0A0 1308 aa16.19■□□□□ 0.18
GSKIP-204ENST00000555088 BTAF1O14981 1849 aa16.18■□□□□ 0.18
GSKIP-204ENST00000555088 ITGB4P16144 1822 aa16.18■□□□□ 0.18
GSKIP-204ENST00000555088 SBF2Q86WG5 1849 aa16.18■□□□□ 0.18
GSKIP-204ENST00000555088 EN1Q05925 392 aaPredicted RBP16.18■□□□□ 0.18
GSKIP-204ENST00000555088 TSPYL6Q8N831 410 aa16.18■□□□□ 0.18
GSKIP-204ENST00000555088 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
GSKIP-204ENST00000555088 RGPD3A6NKT7 1758 aaPredicted RBP16.18■□□□□ 0.18
GSKIP-204ENST00000555088 RGPD4Q7Z3J3 1758 aa16.18■□□□□ 0.18
GSKIP-204ENST00000555088 UBR2Q8IWV8 1755 aa16.18■□□□□ 0.18
GSKIP-204ENST00000555088 HDGFL1Q5TGJ6 251 aa16.17■□□□□ 0.18
GSKIP-204ENST00000555088 CCDC30Q5VVM6 783 aa16.17■□□□□ 0.18
GSKIP-204ENST00000555088 USP16Q9Y5T5 823 aa16.17■□□□□ 0.18
GSKIP-204ENST00000555088 ELL2O00472 640 aaPredicted RBP16.16■□□□□ 0.18
GSKIP-204ENST00000555088 EZH2Q15910 746 aaKnown RBP16.16■□□□□ 0.18
GSKIP-204ENST00000555088 ALDH1L2Q3SY69 923 aa16.16■□□□□ 0.18
GSKIP-204ENST00000555088 LINC00116Q8NCU8 138 aa16.16■□□□□ 0.18
GSKIP-204ENST00000555088 CCDC87Q9NVE4 849 aa16.16■□□□□ 0.18
GSKIP-204ENST00000555088 DBF4Q9UBU7 674 aaPredicted RBP16.16■□□□□ 0.18
GSKIP-204ENST00000555088 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
GSKIP-204ENST00000555088 DEFB132Q7Z7B7 95 aa16.15■□□□□ 0.18
GSKIP-204ENST00000555088 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
GSKIP-204ENST00000555088 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
GSKIP-204ENST00000555088 STK31Q9BXU1 1019 aa16.14■□□□□ 0.17
GSKIP-204ENST00000555088 DDX21Q9NR30 783 aaKnown RBP eCLIP16.14■□□□□ 0.17
GSKIP-204ENST00000555088 EIF2S2P20042 333 aaKnown RBP16.13■□□□□ 0.17
GSKIP-204ENST00000555088 IL6STP40189 918 aaPredicted RBP16.13■□□□□ 0.17
GSKIP-204ENST00000555088 BRPF1P55201 1214 aaPredicted RBP16.13■□□□□ 0.17
GSKIP-204ENST00000555088 HYPKQ9NX55 129 aa16.13■□□□□ 0.17
GSKIP-204ENST00000555088 C5P01031 1676 aa16.13■□□□□ 0.17
GSKIP-204ENST00000555088 LY75O60449 1722 aa16.12■□□□□ 0.17
GSKIP-204ENST00000555088 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
GSKIP-204ENST00000555088 RARSP54136 660 aaKnown RBP16.12■□□□□ 0.17
GSKIP-204ENST00000555088 PDIA6Q15084 440 aa16.12■□□□□ 0.17
GSKIP-204ENST00000555088 AK7Q96M32 723 aa16.12■□□□□ 0.17
GSKIP-204ENST00000555088 CREBZFQ9NS37 354 aa16.12■□□□□ 0.17
GSKIP-204ENST00000555088 NBPF26B4DH59 902 aa16.11■□□□□ 0.17
GSKIP-204ENST00000555088 A1BGP04217 495 aa16.11■□□□□ 0.17
GSKIP-204ENST00000555088 EIF5P55010 431 aaKnown RBP16.11■□□□□ 0.17
GSKIP-204ENST00000555088 KCNQ4P56696 695 aa16.11■□□□□ 0.17
GSKIP-204ENST00000555088 NBPF14Q5TI25 921 aa16.11■□□□□ 0.17
GSKIP-204ENST00000555088 NBPF10Q6P3W6 841 aaKnown RBP16.11■□□□□ 0.17
GSKIP-204ENST00000555088 NBPF15Q8N660 670 aa16.11■□□□□ 0.17
GSKIP-204ENST00000555088 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
GSKIP-204ENST00000555088 A0A087WZG4 1122 aa16.1■□□□□ 0.17
GSKIP-204ENST00000555088 RGL2O15211 777 aa16.1■□□□□ 0.17
GSKIP-204ENST00000555088 SSFA2P28290 1259 aa16.1■□□□□ 0.17
GSKIP-204ENST00000555088 LRP10Q7Z4F1 713 aa16.1■□□□□ 0.17
GSKIP-204ENST00000555088 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
GSKIP-204ENST00000555088 SSH1Q8WYL5 1049 aa16.1■□□□□ 0.17
GSKIP-204ENST00000555088 STK32BQ9NY57 414 aa16.1■□□□□ 0.17
GSKIP-204ENST00000555088 ZBTB1Q9Y2K1 713 aa16.1■□□□□ 0.17
GSKIP-204ENST00000555088 TJP1Q07157 1748 aa16.1■□□□□ 0.17
GSKIP-204ENST00000555088 GNPATO15228 680 aa16.09■□□□□ 0.17
GSKIP-204ENST00000555088 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
GSKIP-204ENST00000555088 RTCBQ9Y3I0 505 aaKnown RBP16.09■□□□□ 0.17
GSKIP-204ENST00000555088 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.17
GSKIP-204ENST00000555088 SOCS7O14512 581 aa16.08■□□□□ 0.16
GSKIP-204ENST00000555088 CANXP27824 592 aaKnown RBP16.08■□□□□ 0.16
GSKIP-204ENST00000555088 SLC15A2Q16348 729 aa16.08■□□□□ 0.16
GSKIP-204ENST00000555088 MRPL50Q8N5N7 158 aaKnown RBP16.08■□□□□ 0.16
GSKIP-204ENST00000555088 SMC4Q9NTJ3 1288 aa16.08■□□□□ 0.16
GSKIP-204ENST00000555088 RCAN3Q9UKA8 241 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms