RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 KANK1Q14678 1352 aa5.15□□□□□ -1.59
RDH11-204ENST00000553578 CLSTN1O94985 981 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 GCGRP47871 477 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 USP46P62068 366 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 DNTTIP2Q5QJE6 756 aaKnown RBP5.14□□□□□ -1.59
RDH11-204ENST00000553578 BEGAINQ9BUH8 593 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 PLA2G2EQ9NZK7 142 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 FER1L4A9Z1Z3 1794 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 MON2Q7Z3U7 1717 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 CD46P15529 392 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 LMOD1P29536 600 aaPredicted RBP5.14□□□□□ -1.59
RDH11-204ENST00000553578 ATP6V1AP38606 617 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 IRX3P78415 501 aaPredicted RBP5.14□□□□□ -1.59
RDH11-204ENST00000553578 ZNF830Q96NB3 372 aaPredicted RBP5.14□□□□□ -1.59
RDH11-204ENST00000553578 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.14□□□□□ -1.59
RDH11-204ENST00000553578 C3P01024 1663 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 NALCNQ8IZF0 1738 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 XRN1Q8IZH2 1706 aaKnown RBP5.14□□□□□ -1.59
RDH11-204ENST00000553578 PTPRMP28827 1452 aa5.14□□□□□ -1.59
RDH11-204ENST00000553578 EIF4G2P78344 907 aaKnown RBP eCLIP5.13□□□□□ -1.59
RDH11-204ENST00000553578 IRF5Q13568 498 aa5.13□□□□□ -1.59
RDH11-204ENST00000553578 AP1G2O75843 785 aa5.13□□□□□ -1.59
RDH11-204ENST00000553578 MTRQ99707 1265 aa5.13□□□□□ -1.59
RDH11-204ENST00000553578 BCL2L13Q9BXK5 485 aa5.13□□□□□ -1.59
RDH11-204ENST00000553578 BLMP54132 1417 aaPredicted RBP5.13□□□□□ -1.59
RDH11-204ENST00000553578 FUT2Q10981 343 aa5.13□□□□□ -1.59
RDH11-204ENST00000553578 PMFBP1Q8TBY8 1022 aa5.13□□□□□ -1.59
RDH11-204ENST00000553578 IPO9Q96P70 1041 aaKnown RBP5.13□□□□□ -1.59
RDH11-204ENST00000553578 KCNG1Q9UIX4 513 aa5.13□□□□□ -1.59
RDH11-204ENST00000553578 KIF7Q2M1P5 1343 aa5.13□□□□□ -1.59
RDH11-204ENST00000553578 NINLQ9Y2I6 1382 aa5.13□□□□□ -1.59
RDH11-204ENST00000553578 PER1O15534 1290 aaPredicted RBP5.13□□□□□ -1.59
RDH11-204ENST00000553578 PUS10Q3MIT2 529 aaKnown RBP5.13□□□□□ -1.59
RDH11-204ENST00000553578 TMED8Q6PL24 325 aaPredicted RBP5.13□□□□□ -1.59
RDH11-204ENST00000553578 PHRF1Q9P1Y6 1649 aaKnown RBP5.12□□□□□ -1.59
RDH11-204ENST00000553578 ALKQ9UM73 1620 aa5.12□□□□□ -1.59
RDH11-204ENST00000553578 PTMAP06454 111 aaKnown RBP5.12□□□□□ -1.59
RDH11-204ENST00000553578 HSPA5P11021 654 aaKnown RBP5.12□□□□□ -1.59
RDH11-204ENST00000553578 GTF2F1P35269 517 aaKnown RBP eCLIP5.12□□□□□ -1.59
RDH11-204ENST00000553578 SIRT1Q96EB6 747 aa5.12□□□□□ -1.59
RDH11-204ENST00000553578 YEATS2Q9ULM3 1422 aa5.12□□□□□ -1.59
RDH11-204ENST00000553578 NLRP1Q9C000 1473 aa5.12□□□□□ -1.59
RDH11-204ENST00000553578 GGCXP38435 758 aa5.12□□□□□ -1.59
RDH11-204ENST00000553578 BLOC1S3Q6QNY0 202 aa5.12□□□□□ -1.59
RDH11-204ENST00000553578 REPIN1Q9BWE0 567 aaKnown RBP5.12□□□□□ -1.59
RDH11-204ENST00000553578 A2ML1A8K2U0 1454 aa5.12□□□□□ -1.59
RDH11-204ENST00000553578 PDCL3Q9H2J4 239 aa5.12□□□□□ -1.59
RDH11-204ENST00000553578 CHIC2Q9UKJ5 165 aa5.12□□□□□ -1.59
RDH11-204ENST00000553578 RNF123Q5XPI4 1314 aa5.11□□□□□ -1.59
RDH11-204ENST00000553578 KIF20BQ96Q89 1820 aa5.11□□□□□ -1.59
RDH11-204ENST00000553578 TULP4Q9NRJ4 1543 aa5.11□□□□□ -1.59
RDH11-204ENST00000553578 LGR5O75473 907 aa5.11□□□□□ -1.59
RDH11-204ENST00000553578 Q3C1V9 767 aa5.11□□□□□ -1.59
RDH11-204ENST00000553578 RGS22Q8NE09 1264 aa5.11□□□□□ -1.59
RDH11-204ENST00000553578 TRIM52Q96A61 297 aa5.11□□□□□ -1.59
RDH11-204ENST00000553578 PLCD4Q9BRC7 762 aa5.11□□□□□ -1.59
RDH11-204ENST00000553578 TMUB1Q9BVT8 246 aa5.11□□□□□ -1.59
RDH11-204ENST00000553578 KAT6BQ8WYB5 2073 aa5.11□□□□□ -1.59
RDH11-204ENST00000553578 BRD4O60885 1362 aaPredicted RBP5.11□□□□□ -1.59
RDH11-204ENST00000553578 PEX14O75381 377 aa5.1□□□□□ -1.59
RDH11-204ENST00000553578 AFAP1Q8N556 730 aa5.1□□□□□ -1.59
RDH11-204ENST00000553578 HDAC5Q9UQL6 1122 aa5.1□□□□□ -1.59
RDH11-204ENST00000553578 NWD1Q149M9 1564 aa5.1□□□□□ -1.59
RDH11-204ENST00000553578 FAM135BQ49AJ0 1406 aa5.1□□□□□ -1.59
RDH11-204ENST00000553578 OS9Q13438 667 aaPredicted RBP5.1□□□□□ -1.59
RDH11-204ENST00000553578 FRAT1Q92837 279 aaPredicted RBP5.1□□□□□ -1.59
RDH11-204ENST00000553578 MARF1Q9Y4F3 1742 aaKnown RBP5.1□□□□□ -1.59
RDH11-204ENST00000553578 SMG6Q86US8 1419 aaKnown RBP5.1□□□□□ -1.59
RDH11-204ENST00000553578 ZPR1O75312 459 aa5.1□□□□□ -1.59
RDH11-204ENST00000553578 GORABQ5T7V8 394 aa5.1□□□□□ -1.59
RDH11-204ENST00000553578 FAM9BQ8IZU0 186 aa5.1□□□□□ -1.59
RDH11-204ENST00000553578 PROCA1Q8NCQ7 364 aaPredicted RBP5.1□□□□□ -1.59
RDH11-204ENST00000553578 MRRFQ96E11 262 aaKnown RBP5.1□□□□□ -1.59
RDH11-204ENST00000553578 ANO2Q9NQ90 1003 aa5.1□□□□□ -1.59
RDH11-204ENST00000553578 FMNL1O95466 1100 aaPredicted RBP5.09□□□□□ -1.59
RDH11-204ENST00000553578 MS4A1P11836 297 aa5.09□□□□□ -1.59
RDH11-204ENST00000553578 FDX1P10109 184 aa5.09□□□□□ -1.59
RDH11-204ENST00000553578 SETQ01105 290 aaPredicted RBP5.09□□□□□ -1.59
RDH11-204ENST00000553578 DDX10Q13206 875 aaKnown RBP5.09□□□□□ -1.59
RDH11-204ENST00000553578 CERS3Q8IU89 383 aa5.09□□□□□ -1.59
RDH11-204ENST00000553578 SCUBE3Q8IX30 993 aa5.09□□□□□ -1.59
RDH11-204ENST00000553578 C14orf93Q9H972 538 aaKnown RBP5.09□□□□□ -1.59
RDH11-204ENST00000553578 SLC52A1Q9NWF4 448 aa5.09□□□□□ -1.59
RDH11-204ENST00000553578 MST1RQ04912 1400 aa5.09□□□□□ -1.59
RDH11-204ENST00000553578 CD163L1Q9NR16 1453 aa5.09□□□□□ -1.6
RDH11-204ENST00000553578 EIF3AQ14152 1382 aaKnown RBP5.09□□□□□ -1.6
RDH11-204ENST00000553578 TJAP1Q5JTD0 557 aa5.09□□□□□ -1.6
RDH11-204ENST00000553578 ZNF516Q92618 1163 aa5.09□□□□□ -1.6
RDH11-204ENST00000553578 TBC1D2Q9BYX2 928 aa5.09□□□□□ -1.6
RDH11-204ENST00000553578 IQSEC3Q9UPP2 1182 aaPredicted RBP5.09□□□□□ -1.6
RDH11-204ENST00000553578 CLGNO14967 610 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 MAFGO15525 162 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 DNAJA1P31689 397 aaKnown RBP5.08□□□□□ -1.6
RDH11-204ENST00000553578 ANAPC15P60006 121 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 MCM6Q14566 821 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 MORN1Q5T089 497 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 GLMNQ92990 594 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 ITSN1Q15811 1721 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 C6orf229H3BNL8 230 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 HOXA2O43364 376 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms