RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 LINC00116Q8NCU8 138 aa7.49□□□□□ -1.21
CELF1-220ENST00000539455 TAF1DQ9H5J8 278 aaPredicted RBP7.49□□□□□ -1.21
CELF1-220ENST00000539455 PARP3Q9Y6F1 533 aa7.49□□□□□ -1.21
CELF1-220ENST00000539455 COL6A3P12111 3177 aa7.49□□□□□ -1.21
CELF1-220ENST00000539455 NFAT5O94916 1531 aa7.48□□□□□ -1.21
CELF1-220ENST00000539455 MAP2K2P36507 400 aa7.48□□□□□ -1.21
CELF1-220ENST00000539455 UBR3Q6ZT12 1888 aa7.48□□□□□ -1.21
CELF1-220ENST00000539455 ANKRD24Q8TF21 1146 aa7.48□□□□□ -1.21
CELF1-220ENST00000539455 C4AP0C0L4 1744 aa7.47□□□□□ -1.21
CELF1-220ENST00000539455 EAPPQ56P03 285 aaPredicted RBP7.47□□□□□ -1.21
CELF1-220ENST00000539455 CNTROBQ8N137 903 aa7.47□□□□□ -1.21
CELF1-220ENST00000539455 COLQQ9Y215 455 aaPredicted RBP7.47□□□□□ -1.21
CELF1-220ENST00000539455 TAF1LQ8IZX4 1826 aa7.46□□□□□ -1.21
CELF1-220ENST00000539455 IQCA1LA6NCM1 817 aa7.46□□□□□ -1.22
CELF1-220ENST00000539455 GYS1P13807 737 aa7.46□□□□□ -1.22
CELF1-220ENST00000539455 BRPF1P55201 1214 aaPredicted RBP7.46□□□□□ -1.22
CELF1-220ENST00000539455 ERFEQ4G0M1 354 aa7.46□□□□□ -1.22
CELF1-220ENST00000539455 MAP1SQ66K74 1059 aaPredicted RBP7.46□□□□□ -1.22
CELF1-220ENST00000539455 TESK2Q96S53 571 aa7.46□□□□□ -1.22
CELF1-220ENST00000539455 DDX21Q9NR30 783 aaKnown RBP eCLIP7.46□□□□□ -1.22
CELF1-220ENST00000539455 WASHC2AQ641Q2 1341 aa7.46□□□□□ -1.22
CELF1-220ENST00000539455 TRIOBPQ9H2D6 2365 aa7.46□□□□□ -1.22
CELF1-220ENST00000539455 CHRDL2Q6WN34 429 aa7.45□□□□□ -1.22
CELF1-220ENST00000539455 ZCRB1Q8TBF4 217 aaKnown RBP7.45□□□□□ -1.22
CELF1-220ENST00000539455 L3MBTL3Q96JM7 780 aaPredicted RBP7.45□□□□□ -1.22
CELF1-220ENST00000539455 RAPGEFL1Q9UHV5 662 aa7.45□□□□□ -1.22
CELF1-220ENST00000539455 HPS5Q9UPZ3 1129 aa7.45□□□□□ -1.22
CELF1-220ENST00000539455 KIF7Q2M1P5 1343 aa7.45□□□□□ -1.22
CELF1-220ENST00000539455 CENPJQ9HC77 1338 aaPredicted RBP7.45□□□□□ -1.22
CELF1-220ENST00000539455 MKI67P46013 3256 aaKnown RBP7.44□□□□□ -1.22
CELF1-220ENST00000539455 CIAPIN1Q6FI81 312 aa7.44□□□□□ -1.22
CELF1-220ENST00000539455 SMARCC1Q92922 1105 aaPredicted RBP7.44□□□□□ -1.22
CELF1-220ENST00000539455 COL25A1Q9BXS0 654 aaPredicted RBP7.44□□□□□ -1.22
CELF1-220ENST00000539455 TLL2Q9Y6L7 1015 aa7.44□□□□□ -1.22
CELF1-220ENST00000539455 CCDC88AQ3V6T2 1871 aa7.43□□□□□ -1.22
CELF1-220ENST00000539455 LOC102724428A0A0B4J2F2 783 aa7.43□□□□□ -1.22
CELF1-220ENST00000539455 FXR2P51116 673 aaKnown RBP eCLIP7.43□□□□□ -1.22
CELF1-220ENST00000539455 SIK1P57059 783 aa7.43□□□□□ -1.22
CELF1-220ENST00000539455 DDR1Q08345 913 aa7.43□□□□□ -1.22
CELF1-220ENST00000539455 ITPK1Q13572 414 aa7.43□□□□□ -1.22
CELF1-220ENST00000539455 TRAPPC3LQ5T215 181 aa7.43□□□□□ -1.22
CELF1-220ENST00000539455 MPRIPQ6WCQ1 1025 aa7.43□□□□□ -1.22
CELF1-220ENST00000539455 ARHGEF1Q92888 912 aaKnown RBP7.43□□□□□ -1.22
CELF1-220ENST00000539455 ZIC5Q96T25 663 aa7.43□□□□□ -1.22
CELF1-220ENST00000539455 TTC21BQ7Z4L5 1316 aa7.43□□□□□ -1.22
CELF1-220ENST00000539455 ADAMTSL1Q8N6G6 1762 aa7.42□□□□□ -1.22
CELF1-220ENST00000539455 DDX10Q13206 875 aaKnown RBP7.42□□□□□ -1.22
CELF1-220ENST00000539455 CST9Q5W186 159 aa7.42□□□□□ -1.22
CELF1-220ENST00000539455 CTU1Q7Z7A3 348 aaKnown RBP7.42□□□□□ -1.22
CELF1-220ENST00000539455 POLR3GLQ9BT43 218 aa7.42□□□□□ -1.22
CELF1-220ENST00000539455 CABP1Q9NZU7 370 aa7.42□□□□□ -1.22
CELF1-220ENST00000539455 SBNO2Q9Y2G9 1366 aa7.42□□□□□ -1.22
CELF1-220ENST00000539455 EPHX2P34913 555 aa7.41□□□□□ -1.22
CELF1-220ENST00000539455 SRPK2P78362 688 aaKnown RBP7.41□□□□□ -1.22
CELF1-220ENST00000539455 DIEXFQ68CQ4 756 aaKnown RBP7.41□□□□□ -1.22
CELF1-220ENST00000539455 CABP2Q9NPB3 220 aa7.41□□□□□ -1.22
CELF1-220ENST00000539455 HACL1Q9UJ83 578 aa7.41□□□□□ -1.22
CELF1-220ENST00000539455 RTCBQ9Y3I0 505 aaKnown RBP7.41□□□□□ -1.22
CELF1-220ENST00000539455 TRAF5O00463 557 aa7.4□□□□□ -1.22
CELF1-220ENST00000539455 PNMA8AQ86V59 439 aaPredicted RBP7.4□□□□□ -1.22
CELF1-220ENST00000539455 TTLL6Q8N841 843 aa7.4□□□□□ -1.22
CELF1-220ENST00000539455 TTC21AQ8NDW8 1320 aa7.39□□□□□ -1.23
CELF1-220ENST00000539455 POLRMTO00411 1230 aaKnown RBP7.39□□□□□ -1.23
CELF1-220ENST00000539455 PRKAR2AP13861 404 aaKnown RBP7.39□□□□□ -1.23
CELF1-220ENST00000539455 RFC4P35249 363 aa7.39□□□□□ -1.23
CELF1-220ENST00000539455 NUBP1P53384 320 aa7.39□□□□□ -1.23
CELF1-220ENST00000539455 SAPCD2Q86UD0 394 aa7.39□□□□□ -1.23
CELF1-220ENST00000539455 PIGBQ92521 554 aa7.39□□□□□ -1.23
CELF1-220ENST00000539455 LTV1Q96GA3 475 aaPredicted RBP7.39□□□□□ -1.23
CELF1-220ENST00000539455 EVC2Q86UK5 1308 aa7.38□□□□□ -1.23
CELF1-220ENST00000539455 ZNF541Q9H0D2 1346 aa7.38□□□□□ -1.23
CELF1-220ENST00000539455 ATP6V1AP38606 617 aa7.38□□□□□ -1.23
CELF1-220ENST00000539455 PRDM6Q9NQX0 595 aa7.38□□□□□ -1.23
CELF1-220ENST00000539455 SAGE1Q9NXZ1 904 aa7.38□□□□□ -1.23
CELF1-220ENST00000539455 UNC80Q8N2C7 3258 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 RNF123Q5XPI4 1314 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 LTBP3Q9NS15 1303 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 C21orf2O43822 256 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 SLC24A1O60721 1099 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 COL9A1P20849 921 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 GSE1Q14687 1217 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 CDCA8Q53HL2 280 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 PIP4P2Q8N4L2 257 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 OTUD5Q96G74 571 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 HHIPL1Q96JK4 782 aa7.37□□□□□ -1.23
CELF1-220ENST00000539455 SRP68Q9UHB9 627 aaKnown RBP7.37□□□□□ -1.23
CELF1-220ENST00000539455 INSRP06213 1382 aa7.36□□□□□ -1.23
CELF1-220ENST00000539455 USP31Q70CQ4 1352 aa7.36□□□□□ -1.23
CELF1-220ENST00000539455 RPS6KA4O75676 772 aa7.36□□□□□ -1.23
CELF1-220ENST00000539455 NOGQ13253 232 aa7.36□□□□□ -1.23
CELF1-220ENST00000539455 AKAP4Q5JQC9 854 aa7.36□□□□□ -1.23
CELF1-220ENST00000539455 TAOK3Q9H2K8 898 aa7.36□□□□□ -1.23
CELF1-220ENST00000539455 ASAP1Q9ULH1 1129 aa7.36□□□□□ -1.23
CELF1-220ENST00000539455 CIZ1Q9ULV3 898 aaPredicted RBP7.36□□□□□ -1.23
CELF1-220ENST00000539455 FARP1Q9Y4F1 1045 aaPredicted RBP7.36□□□□□ -1.23
CELF1-220ENST00000539455 MAP2P11137 1827 aaKnown RBP7.36□□□□□ -1.23
CELF1-220ENST00000539455 FAM208AQ9UK61 1670 aaKnown RBP7.35□□□□□ -1.23
CELF1-220ENST00000539455 PCDH11XQ9BZA7 1347 aa7.35□□□□□ -1.23
CELF1-220ENST00000539455 PCDH11YQ9BZA8 1340 aa7.35□□□□□ -1.23
CELF1-220ENST00000539455 POTEFA5A3E0 1075 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms