RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 PRR20AP86496 221 aa7.99□□□□□ -1.13
SNHG1-207ENST00000537965 FNBP4Q8N3X1 1017 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-207ENST00000537965 PPLO60437 1756 aa7.99□□□□□ -1.13
SNHG1-207ENST00000537965 NPHP3Q7Z494 1330 aa7.99□□□□□ -1.13
SNHG1-207ENST00000537965 LRPPRCP42704 1394 aaKnown RBP7.98□□□□□ -1.13
SNHG1-207ENST00000537965 GDF9O60383 454 aa7.98□□□□□ -1.13
SNHG1-207ENST00000537965 CLK2P49760 499 aaKnown RBP7.98□□□□□ -1.13
SNHG1-207ENST00000537965 PTPRNQ16849 979 aa7.98□□□□□ -1.13
SNHG1-207ENST00000537965 CSPP1Q1MSJ5 1256 aa7.98□□□□□ -1.13
SNHG1-207ENST00000537965 CCDC24Q8N4L8 307 aa7.98□□□□□ -1.13
SNHG1-207ENST00000537965 DDX17Q92841 729 aaKnown RBP7.98□□□□□ -1.13
SNHG1-207ENST00000537965 NUDT12Q9BQG2 462 aa7.98□□□□□ -1.13
SNHG1-207ENST00000537965 COL22A1Q8NFW1 1626 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-207ENST00000537965 PRAG1Q86YV5 1406 aa7.97□□□□□ -1.13
SNHG1-207ENST00000537965 EP400Q96L91 3159 aa7.97□□□□□ -1.13
SNHG1-207ENST00000537965 PLEKHG3A1L390 1219 aa7.97□□□□□ -1.13
SNHG1-207ENST00000537965 CFAP99D6REC4 459 aa7.97□□□□□ -1.13
SNHG1-207ENST00000537965 LILRB3O75022 631 aa7.97□□□□□ -1.13
SNHG1-207ENST00000537965 QPCTQ16769 361 aa7.97□□□□□ -1.13
SNHG1-207ENST00000537965 CABLES1Q8TDN4 633 aa7.97□□□□□ -1.13
SNHG1-207ENST00000537965 ORAI2Q96SN7 254 aa7.97□□□□□ -1.13
SNHG1-207ENST00000537965 POLR3EQ9NVU0 708 aa7.97□□□□□ -1.13
SNHG1-207ENST00000537965 CCNYL3P0C7X3 344 aa7.96□□□□□ -1.14
SNHG1-207ENST00000537965 TRIM32Q13049 653 aa7.96□□□□□ -1.14
SNHG1-207ENST00000537965 SKIV2LQ15477 1246 aaKnown RBP7.96□□□□□ -1.14
SNHG1-207ENST00000537965 ESCO1Q5FWF5 840 aa7.96□□□□□ -1.14
SNHG1-207ENST00000537965 SH3D19Q5HYK7 790 aa7.96□□□□□ -1.14
SNHG1-207ENST00000537965 EVA1BQ9NVM1 165 aa7.96□□□□□ -1.14
SNHG1-207ENST00000537965 PKD2L1Q9P0L9 805 aa7.96□□□□□ -1.14
SNHG1-207ENST00000537965 ROBO2Q9HCK4 1378 aa7.96□□□□□ -1.14
SNHG1-207ENST00000537965 SRCAPQ6ZRS2 3230 aa7.95□□□□□ -1.14
SNHG1-207ENST00000537965 ATRNO75882 1429 aa7.95□□□□□ -1.14
SNHG1-207ENST00000537965 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.95□□□□□ -1.14
SNHG1-207ENST00000537965 NEUROD2Q15784 382 aa7.95□□□□□ -1.14
SNHG1-207ENST00000537965 PTCRAQ6ISU1 281 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-207ENST00000537965 LYPD8Q6UX82 237 aa7.95□□□□□ -1.14
SNHG1-207ENST00000537965 Q6ZNB5 142 aa7.95□□□□□ -1.14
SNHG1-207ENST00000537965 CDC42BPGQ6DT37 1551 aa7.94□□□□□ -1.14
SNHG1-207ENST00000537965 TNFRSF10AO00220 468 aa7.94□□□□□ -1.14
SNHG1-207ENST00000537965 FOXC1Q12948 553 aa7.94□□□□□ -1.14
SNHG1-207ENST00000537965 GJD4Q96KN9 370 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-207ENST00000537965 ACIN1Q9UKV3 1341 aaKnown RBP7.94□□□□□ -1.14
SNHG1-207ENST00000537965 NAIPQ13075 1403 aa7.94□□□□□ -1.14
SNHG1-207ENST00000537965 RGPD8O14715 1765 aaPredicted RBP7.93□□□□□ -1.14
SNHG1-207ENST00000537965 FOXO3O43524 673 aa7.93□□□□□ -1.14
SNHG1-207ENST00000537965 BRPF1P55201 1214 aaPredicted RBP7.93□□□□□ -1.14
SNHG1-207ENST00000537965 KCNH2Q12809 1159 aa7.93□□□□□ -1.14
SNHG1-207ENST00000537965 SF3B2Q13435 895 aaKnown RBP7.93□□□□□ -1.14
SNHG1-207ENST00000537965 RTL5Q5HYW3 569 aaPredicted RBP7.93□□□□□ -1.14
SNHG1-207ENST00000537965 BRWD3Q6RI45 1802 aa7.93□□□□□ -1.14
SNHG1-207ENST00000537965 MYOM2P54296 1465 aa7.93□□□□□ -1.14
SNHG1-207ENST00000537965 KIF1AQ12756 1690 aa7.92□□□□□ -1.14
SNHG1-207ENST00000537965 KNDC1Q76NI1 1749 aa7.92□□□□□ -1.14
SNHG1-207ENST00000537965 WNT7AO00755 349 aa7.92□□□□□ -1.14
SNHG1-207ENST00000537965 WNT7BP56706 349 aa7.92□□□□□ -1.14
SNHG1-207ENST00000537965 PSME1Q06323 249 aa7.92□□□□□ -1.14
SNHG1-207ENST00000537965 UNC5CLQ8IV45 518 aa7.92□□□□□ -1.14
SNHG1-207ENST00000537965 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.92□□□□□ -1.14
SNHG1-207ENST00000537965 ANKRD30BQ9BXX2 1392 aa7.92□□□□□ -1.14
SNHG1-207ENST00000537965 RRBP1Q9P2E9 1410 aaKnown RBP7.92□□□□□ -1.14
SNHG1-207ENST00000537965 BCL9LQ86UU0 1499 aa7.92□□□□□ -1.14
SNHG1-207ENST00000537965 SKOR1P84550 965 aa7.91□□□□□ -1.14
SNHG1-207ENST00000537965 PPARGC1BQ86YN6 1023 aaKnown RBP7.91□□□□□ -1.14
SNHG1-207ENST00000537965 PROCA1Q8NCQ7 364 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-207ENST00000537965 SIRT1Q96EB6 747 aa7.91□□□□□ -1.14
SNHG1-207ENST00000537965 ABCC11Q96J66 1382 aa7.91□□□□□ -1.14
SNHG1-207ENST00000537965 PXDNQ92626 1479 aa7.91□□□□□ -1.14
SNHG1-207ENST00000537965 FMN2Q9NZ56 1722 aa7.91□□□□□ -1.14
SNHG1-207ENST00000537965 IFT172Q9UG01 1749 aa7.91□□□□□ -1.14
SNHG1-207ENST00000537965 NWD2Q9ULI1 1742 aa7.91□□□□□ -1.14
SNHG1-207ENST00000537965 CCDC144AA2RUR9 1427 aa7.9□□□□□ -1.14
SNHG1-207ENST00000537965 TECPR2O15040 1411 aa7.9□□□□□ -1.14
SNHG1-207ENST00000537965 DGAT1O75907 488 aa7.9□□□□□ -1.14
SNHG1-207ENST00000537965 TRAF7Q6Q0C0 670 aa7.9□□□□□ -1.14
SNHG1-207ENST00000537965 UNC93B1Q9H1C4 597 aa7.9□□□□□ -1.14
SNHG1-207ENST00000537965 GOPCQ9HD26 462 aa7.9□□□□□ -1.14
SNHG1-207ENST00000537965 TOR4AQ9NXH8 423 aa7.9□□□□□ -1.14
SNHG1-207ENST00000537965 STK26Q9P289 416 aa7.9□□□□□ -1.14
SNHG1-207ENST00000537965 BLMP54132 1417 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-207ENST00000537965 SPATA31A3Q5VYP0 1347 aa7.89□□□□□ -1.15
SNHG1-207ENST00000537965 LCE2BO14633 110 aa7.89□□□□□ -1.15
SNHG1-207ENST00000537965 PER1O15534 1290 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-207ENST00000537965 F12P00748 615 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-207ENST00000537965 XPCQ01831 940 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-207ENST00000537965 RGL3Q3MIN7 710 aa7.89□□□□□ -1.15
SNHG1-207ENST00000537965 KRT28Q7Z3Y7 464 aa7.89□□□□□ -1.15
SNHG1-207ENST00000537965 WAPLQ7Z5K2 1190 aa7.89□□□□□ -1.15
SNHG1-207ENST00000537965 IL27Q8NEV9 243 aa7.89□□□□□ -1.15
SNHG1-207ENST00000537965 ADGRF5Q8IZF2 1346 aa7.88□□□□□ -1.15
SNHG1-207ENST00000537965 RC3H1Q5TC82 1133 aaKnown RBP7.88□□□□□ -1.15
SNHG1-207ENST00000537965 PPP2R2DQ66LE6 453 aa7.88□□□□□ -1.15
SNHG1-207ENST00000537965 CYP4X1Q8N118 509 aa7.88□□□□□ -1.15
SNHG1-207ENST00000537965 HELBQ8NG08 1087 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-207ENST00000537965 TSC1Q92574 1164 aa7.88□□□□□ -1.15
SNHG1-207ENST00000537965 USP32Q8NFA0 1604 aa7.88□□□□□ -1.15
SNHG1-207ENST00000537965 SLIT2O94813 1529 aa7.88□□□□□ -1.15
SNHG1-207ENST00000537965 RALGAPBQ86X10 1494 aa7.87□□□□□ -1.15
SNHG1-207ENST00000537965 ARHGEF10O15013 1369 aa7.87□□□□□ -1.15
SNHG1-207ENST00000537965 DHX57Q6P158 1386 aaKnown RBP7.87□□□□□ -1.15
SNHG1-207ENST00000537965 CTHP32929 405 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms