RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 NEXNQ0ZGT2 675 aa13.55□□□□□ -0.24
NXF1-211ENST00000531709 ZDHHC9Q9Y397 364 aa13.55□□□□□ -0.24
NXF1-211ENST00000531709 PRR36Q9H6K5 1346 aa13.55□□□□□ -0.24
NXF1-211ENST00000531709 PA2G4Q9UQ80 394 aaKnown RBP13.55□□□□□ -0.24
NXF1-211ENST00000531709 BRD1O95696 1058 aa13.55□□□□□ -0.24
NXF1-211ENST00000531709 MYL6BP14649 208 aa13.55□□□□□ -0.24
NXF1-211ENST00000531709 ESCO1Q5FWF5 840 aa13.55□□□□□ -0.24
NXF1-211ENST00000531709 TRIM5Q9C035 493 aa13.55□□□□□ -0.24
NXF1-211ENST00000531709 TFIP11Q9UBB9 837 aaKnown RBP13.55□□□□□ -0.24
NXF1-211ENST00000531709 VWDEQ8N2E2 1590 aa13.55□□□□□ -0.24
NXF1-211ENST00000531709 KIDINS220Q9ULH0 1771 aa13.55□□□□□ -0.24
NXF1-211ENST00000531709 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
NXF1-211ENST00000531709 LETM1O95202 739 aaPredicted RBP13.54□□□□□ -0.24
NXF1-211ENST00000531709 ZSCAN22P10073 491 aaPredicted RBP13.54□□□□□ -0.24
NXF1-211ENST00000531709 DNM1Q05193 864 aaKnown RBP13.54□□□□□ -0.24
NXF1-211ENST00000531709 CKAP2LQ8IYA6 745 aa13.54□□□□□ -0.24
NXF1-211ENST00000531709 C17orf53Q8N3J3 647 aaPredicted RBP13.54□□□□□ -0.24
NXF1-211ENST00000531709 NBPF7P0C2Y1 421 aaPredicted RBP13.54□□□□□ -0.24
NXF1-211ENST00000531709 DNAJC2Q99543 621 aaKnown RBP13.54□□□□□ -0.24
NXF1-211ENST00000531709 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
NXF1-211ENST00000531709 DDX58O95786 925 aaKnown RBP13.54□□□□□ -0.24
NXF1-211ENST00000531709 CCDC192P0DO97 292 aa13.54□□□□□ -0.24
NXF1-211ENST00000531709 SYT1P21579 422 aa13.54□□□□□ -0.24
NXF1-211ENST00000531709 USP44Q9H0E7 712 aa13.54□□□□□ -0.24
NXF1-211ENST00000531709 PRDM10Q9NQV6 1147 aa13.54□□□□□ -0.24
NXF1-211ENST00000531709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
NXF1-211ENST00000531709 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 GOLGA6L19H0YKK7 550 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 KRT85P78386 507 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 SASS6Q6UVJ0 657 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
NXF1-211ENST00000531709 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
NXF1-211ENST00000531709 BLOC1S2Q6QNY1 142 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 MAP7D2Q96T17 732 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 LMTK2Q8IWU2 1503 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 HECW2Q9P2P5 1572 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 BECN2A8MW95 431 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 PPFIA3O75145 1194 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 PSMA5P28066 241 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 ABCA9Q8IUA7 1624 aa13.53□□□□□ -0.24
NXF1-211ENST00000531709 HS1BP3Q53T59 392 aa13.52□□□□□ -0.24
NXF1-211ENST00000531709 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.24
NXF1-211ENST00000531709 DDX11Q96FC9 970 aa13.52□□□□□ -0.24
NXF1-211ENST00000531709 KIAA0232Q92628 1395 aa13.52□□□□□ -0.24
NXF1-211ENST00000531709 NCOA3Q9Y6Q9 1424 aa13.52□□□□□ -0.24
NXF1-211ENST00000531709 A0A0G2JS52 829 aa13.52□□□□□ -0.25
NXF1-211ENST00000531709 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.25
NXF1-211ENST00000531709 UBE2HP62256 183 aa13.52□□□□□ -0.25
NXF1-211ENST00000531709 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.25
NXF1-211ENST00000531709 TNMDQ9H2S6 317 aa13.52□□□□□ -0.25
NXF1-211ENST00000531709 PTPRMP28827 1452 aa13.52□□□□□ -0.25
NXF1-211ENST00000531709 CAMSAP1Q5T5Y3 1602 aa13.52□□□□□ -0.25
NXF1-211ENST00000531709 MED14O60244 1454 aa13.52□□□□□ -0.25
NXF1-211ENST00000531709 MAP3K2Q9Y2U5 619 aa13.52□□□□□ -0.25
NXF1-211ENST00000531709 AATKQ6ZMQ8 1374 aa13.51□□□□□ -0.25
NXF1-211ENST00000531709 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
NXF1-211ENST00000531709 FAM173BQ6P4H8 233 aa13.51□□□□□ -0.25
NXF1-211ENST00000531709 ECHDC1Q9NTX5 307 aa13.51□□□□□ -0.25
NXF1-211ENST00000531709 FLT4P35916 1363 aa13.51□□□□□ -0.25
NXF1-211ENST00000531709 MROH1Q8NDA8 1641 aa13.51□□□□□ -0.25
NXF1-211ENST00000531709 AK9Q5TCS8 1911 aa13.51□□□□□ -0.25
NXF1-211ENST00000531709 SNX14Q9Y5W7 946 aa13.51□□□□□ -0.25
NXF1-211ENST00000531709 NEXMIFQ5QGS0 1516 aa13.51□□□□□ -0.25
NXF1-211ENST00000531709 MCM5P33992 734 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 CWF19L2Q2TBE0 894 aaKnown RBP13.5□□□□□ -0.25
NXF1-211ENST00000531709 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 TSC1Q92574 1164 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 SPATA32Q96LK8 384 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 NUP62CLQ9H1M0 184 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 F13A1P00488 732 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 PDCP20941 246 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
NXF1-211ENST00000531709 SF3A1Q15459 793 aaKnown RBP13.5□□□□□ -0.25
NXF1-211ENST00000531709 GORABQ5T7V8 394 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 OSBPL3Q9H4L5 887 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 COL3A1P02461 1466 aaPredicted RBP13.5□□□□□ -0.25
NXF1-211ENST00000531709 ATP7BP35670 1465 aa13.5□□□□□ -0.25
NXF1-211ENST00000531709 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.25
NXF1-211ENST00000531709 ERC1Q8IUD2 1116 aa13.49□□□□□ -0.25
NXF1-211ENST00000531709 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
NXF1-211ENST00000531709 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
NXF1-211ENST00000531709 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
NXF1-211ENST00000531709 SGSM2O43147 1006 aa13.49□□□□□ -0.25
NXF1-211ENST00000531709 LRRC59Q96AG4 307 aaKnown RBP13.49□□□□□ -0.25
NXF1-211ENST00000531709 NLRP2Q9NX02 1062 aa13.49□□□□□ -0.25
NXF1-211ENST00000531709 CYP2E1P05181 493 aaPredicted RBP13.49□□□□□ -0.25
NXF1-211ENST00000531709 HSPA4P34932 840 aa13.49□□□□□ -0.25
NXF1-211ENST00000531709 MAP3K11Q16584 847 aa13.49□□□□□ -0.25
NXF1-211ENST00000531709 CLEC17AQ6ZS10 378 aa13.48□□□□□ -0.25
NXF1-211ENST00000531709 ARHGEF40Q8TER5 1519 aa13.48□□□□□ -0.25
NXF1-211ENST00000531709 HOXC9P31274 260 aa13.48□□□□□ -0.25
NXF1-211ENST00000531709 CD163L1Q9NR16 1453 aa13.48□□□□□ -0.25
NXF1-211ENST00000531709 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
NXF1-211ENST00000531709 LTKP29376 864 aa13.48□□□□□ -0.25
NXF1-211ENST00000531709 DBF4Q9UBU7 674 aaPredicted RBP13.48□□□□□ -0.25
NXF1-211ENST00000531709 KIF3AQ9Y496 699 aa13.48□□□□□ -0.25
NXF1-211ENST00000531709 RBM8AQ9Y5S9 174 aaKnown RBP13.48□□□□□ -0.25
NXF1-211ENST00000531709 NEO1Q92859 1461 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms