RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 MSH5O43196 834 aa15.26■□□□□ 0.03
ACER3-210ENST00000531352 A1BGP04217 495 aa15.26■□□□□ 0.03
ACER3-210ENST00000531352 SNRPA1P09661 255 aaKnown RBP15.26■□□□□ 0.03
ACER3-210ENST00000531352 ZNF853P0CG23 659 aa15.26■□□□□ 0.03
ACER3-210ENST00000531352 PIP4K2AP48426 406 aaPredicted RBP15.26■□□□□ 0.03
ACER3-210ENST00000531352 CCDC27Q2M243 656 aa15.26■□□□□ 0.03
ACER3-210ENST00000531352 CFAP44Q96MT7 982 aa15.26■□□□□ 0.03
ACER3-210ENST00000531352 CCDC87Q9NVE4 849 aa15.26■□□□□ 0.03
ACER3-210ENST00000531352 RTCBQ9Y3I0 505 aaKnown RBP15.26■□□□□ 0.03
ACER3-210ENST00000531352 GIGYF1O75420 1035 aaPredicted RBP15.26■□□□□ 0.03
ACER3-210ENST00000531352 SSFA2P28290 1259 aa15.26■□□□□ 0.03
ACER3-210ENST00000531352 ARHGEF1Q92888 912 aaKnown RBP15.26■□□□□ 0.03
ACER3-210ENST00000531352 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
ACER3-210ENST00000531352 STARD3NLO95772 234 aa15.25■□□□□ 0.03
ACER3-210ENST00000531352 HMGB2P26583 209 aaKnown RBP15.25■□□□□ 0.03
ACER3-210ENST00000531352 MBIPQ9NS73 344 aa15.25■□□□□ 0.03
ACER3-210ENST00000531352 BABAM1Q9NWV8 329 aa15.25■□□□□ 0.03
ACER3-210ENST00000531352 CANXP27824 592 aaKnown RBP15.24■□□□□ 0.03
ACER3-210ENST00000531352 PTGER2P43116 358 aa15.24■□□□□ 0.03
ACER3-210ENST00000531352 TEX13AQ9BXU3 409 aaPredicted RBP15.24■□□□□ 0.03
ACER3-210ENST00000531352 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
ACER3-210ENST00000531352 C4AP0C0L4 1744 aa15.24■□□□□ 0.03
ACER3-210ENST00000531352 MSL1Q68DK7 614 aa15.23■□□□□ 0.03
ACER3-210ENST00000531352 FLAD1Q8NFF5 587 aa15.23■□□□□ 0.03
ACER3-210ENST00000531352 MTFR1LQ9H019 292 aa15.23■□□□□ 0.03
ACER3-210ENST00000531352 SOS1Q07889 1333 aaPredicted RBP15.23■□□□□ 0.03
ACER3-210ENST00000531352 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
ACER3-210ENST00000531352 TSR2Q969E8 191 aaKnown RBP15.23■□□□□ 0.03
ACER3-210ENST00000531352 SGIP1Q9BQI5 828 aa15.23■□□□□ 0.03
ACER3-210ENST00000531352 SPON1Q9HCB6 807 aa15.23■□□□□ 0.03
ACER3-210ENST00000531352 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
ACER3-210ENST00000531352 NBPF26B4DH59 902 aa15.22■□□□□ 0.03
ACER3-210ENST00000531352 NBPF10Q6P3W6 841 aaKnown RBP15.22■□□□□ 0.03
ACER3-210ENST00000531352 NBPF15Q8N660 670 aa15.22■□□□□ 0.03
ACER3-210ENST00000531352 SLC16A10Q8TF71 515 aa15.22■□□□□ 0.03
ACER3-210ENST00000531352 SRP68Q9UHB9 627 aaKnown RBP15.22■□□□□ 0.03
ACER3-210ENST00000531352 EIF5P55010 431 aaKnown RBP15.21■□□□□ 0.03
ACER3-210ENST00000531352 GNAI1P63096 354 aa15.21■□□□□ 0.03
ACER3-210ENST00000531352 LAMB4A4D0S4 1761 aa15.21■□□□□ 0.03
ACER3-210ENST00000531352 COL24A1Q17RW2 1714 aa15.21■□□□□ 0.02
ACER3-210ENST00000531352 ADRA2BP18089 450 aa15.2■□□□□ 0.02
ACER3-210ENST00000531352 RFC4P35249 363 aa15.2■□□□□ 0.02
ACER3-210ENST00000531352 CALD1Q05682 793 aaKnown RBP15.2■□□□□ 0.02
ACER3-210ENST00000531352 LRP5O75197 1615 aa15.2■□□□□ 0.02
ACER3-210ENST00000531352 COL15A1P39059 1388 aa15.2■□□□□ 0.02
ACER3-210ENST00000531352 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
ACER3-210ENST00000531352 ZNF330Q9Y3S2 320 aaPredicted RBP15.2■□□□□ 0.02
ACER3-210ENST00000531352 ELL2O00472 640 aaPredicted RBP15.19■□□□□ 0.02
ACER3-210ENST00000531352 GYS1P13807 737 aa15.19■□□□□ 0.02
ACER3-210ENST00000531352 EIF2S2P20042 333 aaKnown RBP15.19■□□□□ 0.02
ACER3-210ENST00000531352 WDR63Q8IWG1 891 aa15.19■□□□□ 0.02
ACER3-210ENST00000531352 C8orf58Q8NAV2 365 aa15.19■□□□□ 0.02
ACER3-210ENST00000531352 NECTIN2Q92692 538 aa15.19■□□□□ 0.02
ACER3-210ENST00000531352 IL6STP40189 918 aaPredicted RBP15.18■□□□□ 0.02
ACER3-210ENST00000531352 CDCA7LQ96GN5 454 aa15.18■□□□□ 0.02
ACER3-210ENST00000531352 USP42Q9H9J4 1324 aaKnown RBP15.18■□□□□ 0.02
ACER3-210ENST00000531352 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
ACER3-210ENST00000531352 TSPYL6Q8N831 410 aa15.18■□□□□ 0.02
ACER3-210ENST00000531352 TBC1D2BQ9UPU7 963 aa15.18■□□□□ 0.02
ACER3-210ENST00000531352 IL16Q14005 1332 aa15.17■□□□□ 0.02
ACER3-210ENST00000531352 ANXA1P04083 346 aa15.17■□□□□ 0.02
ACER3-210ENST00000531352 PDIA6Q15084 440 aa15.17■□□□□ 0.02
ACER3-210ENST00000531352 DUSP27Q5VZP5 1158 aa15.17■□□□□ 0.02
ACER3-210ENST00000531352 BCL2L12Q9HB09 334 aa15.17■□□□□ 0.02
ACER3-210ENST00000531352 FKBP8Q14318 412 aa15.16■□□□□ 0.02
ACER3-210ENST00000531352 PROSER3Q2NL68 480 aa15.16■□□□□ 0.02
ACER3-210ENST00000531352 NARFQ9UHQ1 456 aa15.16■□□□□ 0.02
ACER3-210ENST00000531352 MYL6BP14649 208 aa15.16■□□□□ 0.02
ACER3-210ENST00000531352 LRP10Q7Z4F1 713 aa15.16■□□□□ 0.02
ACER3-210ENST00000531352 NGEFQ8N5V2 710 aa15.16■□□□□ 0.02
ACER3-210ENST00000531352 FANCIQ9NVI1 1328 aa15.15■□□□□ 0.02
ACER3-210ENST00000531352 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
ACER3-210ENST00000531352 ARXQ96QS3 562 aa15.15■□□□□ 0.02
ACER3-210ENST00000531352 ZPR1O75312 459 aa15.15■□□□□ 0.02
ACER3-210ENST00000531352 CAMTA2O94983 1202 aa15.13■□□□□ 0.01
ACER3-210ENST00000531352 MMP10P09238 476 aa15.13■□□□□ 0.01
ACER3-210ENST00000531352 HDGFL1Q5TGJ6 251 aa15.13■□□□□ 0.01
ACER3-210ENST00000531352 DZIP3Q86Y13 1208 aaKnown RBP15.13■□□□□ 0.01
ACER3-210ENST00000531352 NLGN1Q8N2Q7 840 aa15.13■□□□□ 0.01
ACER3-210ENST00000531352 TCERG1O14776 1098 aaKnown RBP15.13■□□□□ 0.01
ACER3-210ENST00000531352 TTLL7Q6ZT98 887 aa15.13■□□□□ 0.01
ACER3-210ENST00000531352 CHPF2Q9P2E5 772 aa15.13■□□□□ 0.01
ACER3-210ENST00000531352 PPP1R1BQ9UD71 204 aaPredicted RBP15.13■□□□□ 0.01
ACER3-210ENST00000531352 HOXB7P09629 217 aa15.12■□□□□ 0.01
ACER3-210ENST00000531352 POLD1P28340 1107 aa15.12■□□□□ 0.01
ACER3-210ENST00000531352 A0A087WZG4 1122 aa15.12■□□□□ 0.01
ACER3-210ENST00000531352 EXOSC9Q06265 439 aaKnown RBP15.12■□□□□ 0.01
ACER3-210ENST00000531352 TM4SF1P30408 202 aa15.11■□□□□ 0.01
ACER3-210ENST00000531352 DDR1Q08345 913 aa15.11■□□□□ 0.01
ACER3-210ENST00000531352 HLFQ16534 295 aa15.11■□□□□ 0.01
ACER3-210ENST00000531352 NPM2Q86SE8 214 aaKnown RBP15.11■□□□□ 0.01
ACER3-210ENST00000531352 FHDC1Q9C0D6 1143 aaPredicted RBP15.11■□□□□ 0.01
ACER3-210ENST00000531352 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
ACER3-210ENST00000531352 ERBB4Q15303 1308 aa15.11■□□□□ 0.01
ACER3-210ENST00000531352 GOLGA2Q08379 1002 aa15.1■□□□□ 0.01
ACER3-210ENST00000531352 NFIXQ14938 502 aa15.1■□□□□ 0.01
ACER3-210ENST00000531352 TBC1D9BQ66K14 1250 aa15.1■□□□□ 0.01
ACER3-210ENST00000531352 DDX21Q9NR30 783 aaKnown RBP eCLIP15.1■□□□□ 0.01
ACER3-210ENST00000531352 SCN7AQ01118 1682 aa15.1■□□□□ 0.01
ACER3-210ENST00000531352 NUP98P52948 1817 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms