RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 A1BGP04217 495 aa24.38■■□□□ 1.49
SMPD1-205ENST00000531303 CANXP27824 592 aaKnown RBP24.38■■□□□ 1.49
SMPD1-205ENST00000531303 CCNL1Q9UK58 526 aaPredicted RBP24.38■■□□□ 1.49
SMPD1-205ENST00000531303 STARD3NLO95772 234 aa24.38■■□□□ 1.49
SMPD1-205ENST00000531303 PROSER3Q2NL68 480 aa24.38■■□□□ 1.49
SMPD1-205ENST00000531303 NOB1Q9ULX3 412 aaKnown RBP24.38■■□□□ 1.49
SMPD1-205ENST00000531303 LY75O60449 1722 aa24.37■■□□□ 1.49
SMPD1-205ENST00000531303 CACNA1FO60840 1977 aa24.37■■□□□ 1.49
SMPD1-205ENST00000531303 MYL6BP14649 208 aa24.37■■□□□ 1.49
SMPD1-205ENST00000531303 DBF4Q9UBU7 674 aaPredicted RBP24.37■■□□□ 1.49
SMPD1-205ENST00000531303 CYP19A1P11511 503 aaPredicted RBP24.36■■□□□ 1.49
SMPD1-205ENST00000531303 RRP1P56182 461 aaKnown RBP24.36■■□□□ 1.49
SMPD1-205ENST00000531303 G2E3Q7L622 706 aa24.36■■□□□ 1.49
SMPD1-205ENST00000531303 TNS1Q9HBL0 1735 aaKnown RBP24.36■■□□□ 1.49
SMPD1-205ENST00000531303 PHAXQ9H814 394 aaKnown RBP24.34■■□□□ 1.49
SMPD1-205ENST00000531303 DDX21Q9NR30 783 aaKnown RBP eCLIP24.34■■□□□ 1.49
SMPD1-205ENST00000531303 PDIA6Q15084 440 aa24.33■■□□□ 1.49
SMPD1-205ENST00000531303 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.33■■□□□ 1.49
SMPD1-205ENST00000531303 LINC00116Q8NCU8 138 aa24.33■■□□□ 1.49
SMPD1-205ENST00000531303 NBPF26B4DH59 902 aa24.32■■□□□ 1.48
SMPD1-205ENST00000531303 NBPF14Q5TI25 921 aa24.32■■□□□ 1.48
SMPD1-205ENST00000531303 NBPF10Q6P3W6 841 aaKnown RBP24.32■■□□□ 1.48
SMPD1-205ENST00000531303 NBPF15Q8N660 670 aa24.32■■□□□ 1.48
SMPD1-205ENST00000531303 ZNF330Q9Y3S2 320 aaPredicted RBP24.32■■□□□ 1.48
SMPD1-205ENST00000531303 KIF16BQ96L93 1317 aa24.32■■□□□ 1.48
SMPD1-205ENST00000531303 BRPF1P55201 1214 aaPredicted RBP24.32■■□□□ 1.48
SMPD1-205ENST00000531303 IRX6P78412 446 aaPredicted RBP24.32■■□□□ 1.48
SMPD1-205ENST00000531303 AIMP1Q12904 312 aaKnown RBP24.32■■□□□ 1.48
SMPD1-205ENST00000531303 HYPKQ9NX55 129 aa24.32■■□□□ 1.48
SMPD1-205ENST00000531303 TNNQ9UQP3 1299 aa24.32■■□□□ 1.48
SMPD1-205ENST00000531303 ZNF831Q5JPB2 1677 aa24.31■■□□□ 1.48
SMPD1-205ENST00000531303 CRKLP46109 303 aaKnown RBP24.31■■□□□ 1.48
SMPD1-205ENST00000531303 SF3B2Q13435 895 aaKnown RBP24.31■■□□□ 1.48
SMPD1-205ENST00000531303 ZKSCAN2Q63HK3 967 aa24.31■■□□□ 1.48
SMPD1-205ENST00000531303 LRRC4BQ9NT99 713 aa24.31■■□□□ 1.48
SMPD1-205ENST00000531303 RNF123Q5XPI4 1314 aa24.3■■□□□ 1.48
SMPD1-205ENST00000531303 PLSCR1O15162 318 aa24.3■■□□□ 1.48
SMPD1-205ENST00000531303 IPO8O15397 1037 aaKnown RBP24.3■■□□□ 1.48
SMPD1-205ENST00000531303 FLIIQ13045 1269 aa24.3■■□□□ 1.48
SMPD1-205ENST00000531303 TXNRD1Q16881 649 aa24.3■■□□□ 1.48
SMPD1-205ENST00000531303 CCDC87Q9NVE4 849 aa24.3■■□□□ 1.48
SMPD1-205ENST00000531303 ZBTB1Q9Y2K1 713 aa24.3■■□□□ 1.48
SMPD1-205ENST00000531303 COL5A3P25940 1745 aaPredicted RBP24.3■■□□□ 1.48
SMPD1-205ENST00000531303 MYH14Q7Z406 1995 aaKnown RBP24.3■■□□□ 1.48
SMPD1-205ENST00000531303 ERBB4Q15303 1308 aa24.3■■□□□ 1.48
SMPD1-205ENST00000531303 FKBP5Q13451 457 aaPredicted RBP24.29■■□□□ 1.48
SMPD1-205ENST00000531303 CLUAP1Q96AJ1 413 aa24.29■■□□□ 1.48
SMPD1-205ENST00000531303 TAF1LQ8IZX4 1826 aa24.29■■□□□ 1.48
SMPD1-205ENST00000531303 INTS5Q6P9B9 1019 aaKnown RBP24.28■■□□□ 1.48
SMPD1-205ENST00000531303 PROM2Q8N271 834 aa24.28■■□□□ 1.48
SMPD1-205ENST00000531303 CICQ96RK0 1608 aaPredicted RBP24.28■■□□□ 1.48
SMPD1-205ENST00000531303 EN1Q05925 392 aaPredicted RBP24.27■■□□□ 1.48
SMPD1-205ENST00000531303 SLC27A3Q5K4L6 730 aa24.27■■□□□ 1.48
SMPD1-205ENST00000531303 C20orf194Q5TEA3 1177 aa24.27■■□□□ 1.48
SMPD1-205ENST00000531303 ATF7IPQ6VMQ6 1270 aa24.27■■□□□ 1.48
SMPD1-205ENST00000531303 XAGE3Q8WTP9 111 aa24.27■■□□□ 1.48
SMPD1-205ENST00000531303 ARXQ96QS3 562 aa24.27■■□□□ 1.48
SMPD1-205ENST00000531303 TRIM27P14373 513 aa24.26■■□□□ 1.47
SMPD1-205ENST00000531303 COPS6Q7L5N1 327 aa24.26■■□□□ 1.47
SMPD1-205ENST00000531303 PTPRCP08575 1304 aa24.25■■□□□ 1.47
SMPD1-205ENST00000531303 LRP10Q7Z4F1 713 aa24.25■■□□□ 1.47
SMPD1-205ENST00000531303 DEFB132Q7Z7B7 95 aa24.25■■□□□ 1.47
SMPD1-205ENST00000531303 FTSJ3Q8IY81 847 aaKnown RBP24.25■■□□□ 1.47
SMPD1-205ENST00000531303 PANK1Q8TE04 598 aa24.25■■□□□ 1.47
SMPD1-205ENST00000531303 ARHGAP45Q92619 1136 aa24.25■■□□□ 1.47
SMPD1-205ENST00000531303 API5Q9BZZ5 524 aaKnown RBP24.25■■□□□ 1.47
SMPD1-205ENST00000531303 F6X3S4 739 aa24.24■■□□□ 1.47
SMPD1-205ENST00000531303 NEFLP07196 543 aa24.24■■□□□ 1.47
SMPD1-205ENST00000531303 EZH2Q15910 746 aaKnown RBP24.24■■□□□ 1.47
SMPD1-205ENST00000531303 CNTNAP4Q9C0A0 1308 aa24.23■■□□□ 1.47
SMPD1-205ENST00000531303 BAG6P46379 1132 aa24.23■■□□□ 1.47
SMPD1-205ENST00000531303 SMIM5Q71RC9 77 aa24.23■■□□□ 1.47
SMPD1-205ENST00000531303 NPM2Q86SE8 214 aaKnown RBP24.23■■□□□ 1.47
SMPD1-205ENST00000531303 DZIP1LQ8IYY4 767 aaKnown RBP24.23■■□□□ 1.47
SMPD1-205ENST00000531303 C4BP0C0L5 1744 aa24.22■■□□□ 1.47
SMPD1-205ENST00000531303 GNPATO15228 680 aa24.22■■□□□ 1.47
SMPD1-205ENST00000531303 RLBP1P12271 317 aa24.22■■□□□ 1.47
SMPD1-205ENST00000531303 TTLL7Q6ZT98 887 aa24.22■■□□□ 1.47
SMPD1-205ENST00000531303 RC3H1Q5TC82 1133 aaKnown RBP24.21■■□□□ 1.47
SMPD1-205ENST00000531303 SLC4A10Q6U841 1118 aa24.21■■□□□ 1.47
SMPD1-205ENST00000531303 AK7Q96M32 723 aa24.21■■□□□ 1.47
SMPD1-205ENST00000531303 CAMKK2Q96RR4 588 aa24.21■■□□□ 1.47
SMPD1-205ENST00000531303 RREB1Q92766 1687 aa24.21■■□□□ 1.47
SMPD1-205ENST00000531303 PI4KAP2A4QPH2 592 aa24.2■■□□□ 1.47
SMPD1-205ENST00000531303 DDX58O95786 925 aaKnown RBP24.2■■□□□ 1.47
SMPD1-205ENST00000531303 IL6STP40189 918 aaPredicted RBP24.2■■□□□ 1.47
SMPD1-205ENST00000531303 PI4KAP1Q8N8J0 262 aa24.2■■□□□ 1.47
SMPD1-205ENST00000531303 RGPD3A6NKT7 1758 aaPredicted RBP24.2■■□□□ 1.46
SMPD1-205ENST00000531303 RGPD4Q7Z3J3 1758 aa24.2■■□□□ 1.46
SMPD1-205ENST00000531303 EIF5P55010 431 aaKnown RBP24.19■■□□□ 1.46
SMPD1-205ENST00000531303 RIC3Q7Z5B4 369 aa24.19■■□□□ 1.46
SMPD1-205ENST00000531303 MS4A1P11836 297 aa24.19■■□□□ 1.46
SMPD1-205ENST00000531303 PDE3AQ14432 1141 aa24.19■■□□□ 1.46
SMPD1-205ENST00000531303 KSR2Q6VAB6 950 aa24.19■■□□□ 1.46
SMPD1-205ENST00000531303 ANKRD13DQ6ZTN6 518 aa24.19■■□□□ 1.46
SMPD1-205ENST00000531303 CCDC125Q86Z20 511 aa24.19■■□□□ 1.46
SMPD1-205ENST00000531303 TBC1D2BQ9UPU7 963 aa24.19■■□□□ 1.46
SMPD1-205ENST00000531303 MAP3K2Q9Y2U5 619 aa24.19■■□□□ 1.46
SMPD1-205ENST00000531303 ADCY9O60503 1353 aa24.18■■□□□ 1.46
SMPD1-205ENST00000531303 KIF6Q6ZMV9 814 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms