RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 WDR63Q8IWG1 891 aa16.27■□□□□ 0.2
HDAC2-211ENST00000521233 CCDC87Q9NVE4 849 aa16.27■□□□□ 0.2
HDAC2-211ENST00000521233 ZNF853P0CG23 659 aa16.26■□□□□ 0.19
HDAC2-211ENST00000521233 CYP19A1P11511 503 aaPredicted RBP16.26■□□□□ 0.19
HDAC2-211ENST00000521233 RTCBQ9Y3I0 505 aaKnown RBP16.26■□□□□ 0.19
HDAC2-211ENST00000521233 PNPLA7Q6ZV29 1317 aa16.25■□□□□ 0.19
HDAC2-211ENST00000521233 GIGYF1O75420 1035 aaPredicted RBP16.24■□□□□ 0.19
HDAC2-211ENST00000521233 RPS6KA4O75676 772 aa16.24■□□□□ 0.19
HDAC2-211ENST00000521233 HOXB7P09629 217 aa16.24■□□□□ 0.19
HDAC2-211ENST00000521233 SLC16A10Q8TF71 515 aa16.24■□□□□ 0.19
HDAC2-211ENST00000521233 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
HDAC2-211ENST00000521233 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
HDAC2-211ENST00000521233 MYH14Q7Z406 1995 aaKnown RBP16.24■□□□□ 0.19
HDAC2-211ENST00000521233 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
HDAC2-211ENST00000521233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.23■□□□□ 0.19
HDAC2-211ENST00000521233 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
HDAC2-211ENST00000521233 ERBB4Q15303 1308 aa16.22■□□□□ 0.19
HDAC2-211ENST00000521233 ZNF521Q96K83 1311 aa16.22■□□□□ 0.19
HDAC2-211ENST00000521233 PHF14O94880 888 aa16.22■□□□□ 0.19
HDAC2-211ENST00000521233 CACNB1Q02641 598 aaPredicted RBP16.22■□□□□ 0.19
HDAC2-211ENST00000521233 INTS5Q6P9B9 1019 aaKnown RBP16.22■□□□□ 0.19
HDAC2-211ENST00000521233 NPM2Q86SE8 214 aaKnown RBP16.22■□□□□ 0.19
HDAC2-211ENST00000521233 CHMP4AQ9BY43 222 aa16.22■□□□□ 0.19
HDAC2-211ENST00000521233 MYH16Q9H6N6 1097 aa16.22■□□□□ 0.19
HDAC2-211ENST00000521233 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
HDAC2-211ENST00000521233 COL15A1P39059 1388 aa16.22■□□□□ 0.19
HDAC2-211ENST00000521233 LRP5O75197 1615 aa16.21■□□□□ 0.19
HDAC2-211ENST00000521233 C4AP0C0L4 1744 aa16.21■□□□□ 0.19
HDAC2-211ENST00000521233 A0A087WZG4 1122 aa16.2■□□□□ 0.18
HDAC2-211ENST00000521233 IL6STP40189 918 aaPredicted RBP16.2■□□□□ 0.18
HDAC2-211ENST00000521233 TRAPPC3LQ5T215 181 aa16.2■□□□□ 0.18
HDAC2-211ENST00000521233 COL23A1Q86Y22 540 aaPredicted RBP16.2■□□□□ 0.18
HDAC2-211ENST00000521233 MTFR1LQ9H019 292 aa16.2■□□□□ 0.18
HDAC2-211ENST00000521233 FANCIQ9NVI1 1328 aa16.19■□□□□ 0.18
HDAC2-211ENST00000521233 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
HDAC2-211ENST00000521233 PRAMEF22A3QJZ6 481 aa16.18■□□□□ 0.18
HDAC2-211ENST00000521233 CANXP27824 592 aaKnown RBP16.18■□□□□ 0.18
HDAC2-211ENST00000521233 RFC4P35249 363 aa16.18■□□□□ 0.18
HDAC2-211ENST00000521233 GOLGA2Q08379 1002 aa16.18■□□□□ 0.18
HDAC2-211ENST00000521233 TSR2Q969E8 191 aaKnown RBP16.18■□□□□ 0.18
HDAC2-211ENST00000521233 SCN7AQ01118 1682 aa16.18■□□□□ 0.18
HDAC2-211ENST00000521233 E9PSI1 815 aa16.17■□□□□ 0.18
HDAC2-211ENST00000521233 A1BGP04217 495 aa16.17■□□□□ 0.18
HDAC2-211ENST00000521233 EIF5P55010 431 aaKnown RBP16.17■□□□□ 0.18
HDAC2-211ENST00000521233 HNRNPUQ00839 825 aaKnown RBP eCLIP16.17■□□□□ 0.18
HDAC2-211ENST00000521233 HDGFL1Q5TGJ6 251 aa16.17■□□□□ 0.18
HDAC2-211ENST00000521233 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
HDAC2-211ENST00000521233 AMIGO3Q86WK7 504 aa16.17■□□□□ 0.18
HDAC2-211ENST00000521233 SPON1Q9HCB6 807 aa16.17■□□□□ 0.18
HDAC2-211ENST00000521233 USP42Q9H9J4 1324 aaKnown RBP16.17■□□□□ 0.18
HDAC2-211ENST00000521233 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
HDAC2-211ENST00000521233 ARHGEF1Q92888 912 aaKnown RBP16.16■□□□□ 0.18
HDAC2-211ENST00000521233 PDGFDQ9GZP0 370 aaPredicted RBP16.16■□□□□ 0.18
HDAC2-211ENST00000521233 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
HDAC2-211ENST00000521233 ZPR1O75312 459 aa16.15■□□□□ 0.18
HDAC2-211ENST00000521233 ZBTB7AO95365 584 aa16.15■□□□□ 0.18
HDAC2-211ENST00000521233 KRT24Q2M2I5 525 aa16.15■□□□□ 0.18
HDAC2-211ENST00000521233 BCORQ6W2J9 1755 aa16.14■□□□□ 0.17
HDAC2-211ENST00000521233 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
HDAC2-211ENST00000521233 POLD1P28340 1107 aa16.14■□□□□ 0.17
HDAC2-211ENST00000521233 NARFQ9UHQ1 456 aa16.14■□□□□ 0.17
HDAC2-211ENST00000521233 NBPF26B4DH59 902 aa16.13■□□□□ 0.17
HDAC2-211ENST00000521233 RGL2O15211 777 aa16.13■□□□□ 0.17
HDAC2-211ENST00000521233 TWISTNBQ3B726 338 aaPredicted RBP16.13■□□□□ 0.17
HDAC2-211ENST00000521233 NBPF10Q6P3W6 841 aaKnown RBP16.13■□□□□ 0.17
HDAC2-211ENST00000521233 NLGN1Q8N2Q7 840 aa16.13■□□□□ 0.17
HDAC2-211ENST00000521233 NBPF15Q8N660 670 aa16.13■□□□□ 0.17
HDAC2-211ENST00000521233 ZBED9Q6R2W3 1325 aa16.13■□□□□ 0.17
HDAC2-211ENST00000521233 CCDC30Q5VVM6 783 aa16.12■□□□□ 0.17
HDAC2-211ENST00000521233 SMIM5Q71RC9 77 aa16.12■□□□□ 0.17
HDAC2-211ENST00000521233 DZIP3Q86Y13 1208 aaKnown RBP16.12■□□□□ 0.17
HDAC2-211ENST00000521233 C8orf58Q8NAV2 365 aa16.12■□□□□ 0.17
HDAC2-211ENST00000521233 DDX21Q9NR30 783 aaKnown RBP eCLIP16.12■□□□□ 0.17
HDAC2-211ENST00000521233 DBF4Q9UBU7 674 aaPredicted RBP16.12■□□□□ 0.17
HDAC2-211ENST00000521233 GYS1P13807 737 aa16.11■□□□□ 0.17
HDAC2-211ENST00000521233 PIP4K2AP48426 406 aaPredicted RBP16.11■□□□□ 0.17
HDAC2-211ENST00000521233 SLFN5Q08AF3 891 aa16.11■□□□□ 0.17
HDAC2-211ENST00000521233 KIF6Q6ZMV9 814 aa16.11■□□□□ 0.17
HDAC2-211ENST00000521233 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
HDAC2-211ENST00000521233 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
HDAC2-211ENST00000521233 ZNF652Q9Y2D9 606 aa16.11■□□□□ 0.17
HDAC2-211ENST00000521233 ELL2O00472 640 aaPredicted RBP16.1■□□□□ 0.17
HDAC2-211ENST00000521233 MYL6BP14649 208 aa16.1■□□□□ 0.17
HDAC2-211ENST00000521233 EXOSC9Q06265 439 aaKnown RBP16.1■□□□□ 0.17
HDAC2-211ENST00000521233 USPL1Q5W0Q7 1092 aa16.1■□□□□ 0.17
HDAC2-211ENST00000521233 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
HDAC2-211ENST00000521233 NECTIN2Q92692 538 aa16.1■□□□□ 0.17
HDAC2-211ENST00000521233 STK31Q9BXU1 1019 aa16.1■□□□□ 0.17
HDAC2-211ENST00000521233 HYPKQ9NX55 129 aa16.1■□□□□ 0.17
HDAC2-211ENST00000521233 CHPF2Q9P2E5 772 aa16.1■□□□□ 0.17
HDAC2-211ENST00000521233 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
HDAC2-211ENST00000521233 TSPYL6Q8N831 410 aa16.09■□□□□ 0.17
HDAC2-211ENST00000521233 ARXQ96QS3 562 aa16.09■□□□□ 0.17
HDAC2-211ENST00000521233 SGIP1Q9BQI5 828 aa16.09■□□□□ 0.17
HDAC2-211ENST00000521233 CAMTA2O94983 1202 aa16.08■□□□□ 0.16
HDAC2-211ENST00000521233 PTGER2P43116 358 aa16.08■□□□□ 0.16
HDAC2-211ENST00000521233 PDIA6Q15084 440 aa16.08■□□□□ 0.16
HDAC2-211ENST00000521233 PPP1R1BQ9UD71 204 aaPredicted RBP16.08■□□□□ 0.16
HDAC2-211ENST00000521233 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
HDAC2-211ENST00000521233 ERVV-1B6SEH8 477 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms