RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 CCDC8Q9H0W5 538 aaPredicted RBP13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 BOLA2Q9H3K6 86 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 SBNO1A3KN83 1393 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 PTPRMP28827 1452 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 FRMPD1Q5SYB0 1578 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 GOLGA6L19H0YKK7 550 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 TRDNQ13061 729 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 STK3Q13188 491 aa13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
PCDHGB4-201ENST00000519479 MAP3K5Q99683 1374 aa13.46□□□□□ -0.25
PCDHGB4-201ENST00000519479 ABCC4O15439 1325 aa13.46□□□□□ -0.25
PCDHGB4-201ENST00000519479 BECN2A8MW95 431 aa13.46□□□□□ -0.25
PCDHGB4-201ENST00000519479 CPLX2Q6PUV4 134 aaKnown RBP13.46□□□□□ -0.26
PCDHGB4-201ENST00000519479 SPATA31D1Q6ZQQ2 1576 aa13.46□□□□□ -0.26
PCDHGB4-201ENST00000519479 ECHDC1Q9NTX5 307 aa13.46□□□□□ -0.26
PCDHGB4-201ENST00000519479 ESYT1Q9BSJ8 1104 aa13.45□□□□□ -0.26
PCDHGB4-201ENST00000519479 PHAXQ9H814 394 aaKnown RBP13.45□□□□□ -0.26
PCDHGB4-201ENST00000519479 TPM4P67936 248 aa13.45□□□□□ -0.26
PCDHGB4-201ENST00000519479 LARP1BQ659C4 914 aaKnown RBP13.45□□□□□ -0.26
PCDHGB4-201ENST00000519479 RALYLQ86SE5 291 aaKnown RBP13.45□□□□□ -0.26
PCDHGB4-201ENST00000519479 NGLY1Q96IV0 654 aa13.45□□□□□ -0.26
PCDHGB4-201ENST00000519479 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
PCDHGB4-201ENST00000519479 PTCD1O75127 700 aaKnown RBP13.45□□□□□ -0.26
PCDHGB4-201ENST00000519479 ATP7BP35670 1465 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 ANKRD1Q15327 319 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 ROBO2Q9HCK4 1378 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 SYCE3A1L190 88 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 ESPNB1AK53 854 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 ALKQ9UM73 1620 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 CCDC83Q8IWF9 413 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 TMX3Q96JJ7 454 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 USP26Q9BXU7 913 aa13.44□□□□□ -0.26
PCDHGB4-201ENST00000519479 SASS6Q6UVJ0 657 aa13.43□□□□□ -0.26
PCDHGB4-201ENST00000519479 KIF6Q6ZMV9 814 aa13.43□□□□□ -0.26
PCDHGB4-201ENST00000519479 IP6K1Q92551 441 aa13.43□□□□□ -0.26
PCDHGB4-201ENST00000519479 PREX1Q8TCU6 1659 aa13.43□□□□□ -0.26
PCDHGB4-201ENST00000519479 ADAMTS2O95450 1211 aa13.43□□□□□ -0.26
PCDHGB4-201ENST00000519479 GCP02774 474 aa13.43□□□□□ -0.26
PCDHGB4-201ENST00000519479 CCDC39Q9UFE4 941 aa13.43□□□□□ -0.26
PCDHGB4-201ENST00000519479 ANKARQ7Z5J8 1434 aa13.43□□□□□ -0.26
PCDHGB4-201ENST00000519479 PRR36Q9H6K5 1346 aa13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 ORAI2Q96SN7 254 aa13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 TMX4Q9H1E5 349 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 NEURL4Q96JN8 1562 aa13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 LETM1O95202 739 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 SETD1BQ9UPS6 1966 aaKnown RBP13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 RAB3GAP1Q15042 981 aa13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 CHRNA2Q15822 529 aa13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 CCDC73Q6ZRK6 1079 aa13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 LIMCH1Q9UPQ0 1083 aa13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 CCDC158Q5M9N0 1113 aa13.42□□□□□ -0.26
PCDHGB4-201ENST00000519479 KIAA0232Q92628 1395 aa13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 RIMS1Q86UR5 1692 aaKnown RBP13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 XRCC6P12956 609 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 FAM177BA6PVY3 158 aa13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 KRT85P78386 507 aa13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 KLHL40Q2TBA0 621 aa13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 IFNL2Q8IZJ0 200 aa13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 CEP126Q9P2H0 1117 aa13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 A0A087WZG4 1122 aa13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 FKBP4Q02790 459 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 CCDC85AQ96PX6 553 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 FMNL2Q96PY5 1086 aa13.41□□□□□ -0.26
PCDHGB4-201ENST00000519479 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 EVI5LQ96CN4 794 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 CEBPZQ03701 1054 aaKnown RBP13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 TTC39AQ5SRH9 613 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 KSR2Q6VAB6 950 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 FERMT3Q86UX7 667 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 JARID2Q92833 1246 aaPredicted RBP13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 GDPD2Q9HCC8 539 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 TRIM29Q14134 588 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 PIK3C2BO00750 1634 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 ATP5J2-PTCD1G3V325 749 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 UBE3BQ7Z3V4 1068 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 MPNDQ8N594 471 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 FBXW7Q969H0 707 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 PANK2Q9BZ23 570 aa13.4□□□□□ -0.26
PCDHGB4-201ENST00000519479 CCDC34Q96HJ3 373 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 USP19O94966 1318 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 QRICH2Q9H0J4 1663 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 KRT32Q14532 448 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 ZGPATQ8N5A5 531 aaKnown RBP13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 LGR6Q9HBX8 967 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 CNNM1Q9NRU3 951 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 PA2G4Q9UQ80 394 aaKnown RBP13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 PNMA6EA0A0J9YXQ4 647 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms