RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 PDIA4P13667 645 aaKnown RBP14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 GTF2A1P52655 376 aaPredicted RBP14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 TDO2P48775 406 aa14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 DDX11Q96FC9 970 aa14.34□□□□□ -0.11
PCDHGA6-201ENST00000517434 SNRPA1P09661 255 aaKnown RBP14.33□□□□□ -0.11
PCDHGA6-201ENST00000517434 UBAC1Q9BSL1 405 aa14.33□□□□□ -0.11
PCDHGA6-201ENST00000517434 SIL1Q9H173 461 aa14.33□□□□□ -0.11
PCDHGA6-201ENST00000517434 EIF4G3O43432 1585 aaKnown RBP14.33□□□□□ -0.12
PCDHGA6-201ENST00000517434 AACSQ86V21 672 aa14.33□□□□□ -0.12
PCDHGA6-201ENST00000517434 STK11IPQ8N1F8 1099 aa14.33□□□□□ -0.12
PCDHGA6-201ENST00000517434 MTMR7Q9Y216 660 aa14.33□□□□□ -0.12
PCDHGA6-201ENST00000517434 SYCE3A1L190 88 aa14.33□□□□□ -0.12
PCDHGA6-201ENST00000517434 PIP4K2AP48426 406 aaPredicted RBP14.33□□□□□ -0.12
PCDHGA6-201ENST00000517434 CCDC69A6NI79 296 aa14.33□□□□□ -0.12
PCDHGA6-201ENST00000517434 KCNA6P17658 529 aa14.33□□□□□ -0.12
PCDHGA6-201ENST00000517434 KRT85P78386 507 aa14.33□□□□□ -0.12
PCDHGA6-201ENST00000517434 FKBP4Q02790 459 aaKnown RBP eCLIP14.33□□□□□ -0.12
PCDHGA6-201ENST00000517434 TRPM2O94759 1503 aa14.32□□□□□ -0.12
PCDHGA6-201ENST00000517434 CRACR2BQ8N4Y2 399 aaPredicted RBP14.32□□□□□ -0.12
PCDHGA6-201ENST00000517434 KIF1BPQ96EK5 621 aa14.32□□□□□ -0.12
PCDHGA6-201ENST00000517434 OFD1O75665 1012 aa14.32□□□□□ -0.12
PCDHGA6-201ENST00000517434 SERPINC1P01008 464 aa14.32□□□□□ -0.12
PCDHGA6-201ENST00000517434 CBFA2T2O43439 604 aa14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 HSPA2P54652 639 aa14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 AIDAQ96BJ3 306 aa14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 ERLIN2O94905 339 aa14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 BMS1Q14692 1282 aaKnown RBP14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 NEO1Q92859 1461 aa14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 SYCP2Q9BX26 1530 aa14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 MPHOSPH10O00566 681 aaKnown RBP14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 MAP3K12Q12852 859 aa14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 MVPQ14764 893 aaKnown RBP14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 SPTY2D1Q68D10 685 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 DZIP1Q86YF9 867 aaKnown RBP14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 EMILIN1Q9Y6C2 1016 aa14.31□□□□□ -0.12
PCDHGA6-201ENST00000517434 SMAP1Q8IYB5 467 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 CRACR2AQ9BSW2 395 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 NOL7Q9UMY1 257 aaKnown RBP14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 IL2RBP14784 551 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 EPS15P42566 896 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 KRT222Q8N1A0 295 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 CYP46A1Q9Y6A2 500 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 IQCEQ6IPM2 695 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 CEP57L1Q8IYX8 460 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 WASF1Q92558 559 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 DISP1Q96F81 1524 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 NUP62CLQ9H1M0 184 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 PPFIBP1Q86W92 1011 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 MYD88Q99836 296 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 ABCF2Q9UG63 623 aa14.3□□□□□ -0.12
PCDHGA6-201ENST00000517434 NCKAP5LQ9HCH0 1330 aa14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 C6orf229H3BNL8 230 aa14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 POLR3GO15318 223 aaPredicted RBP14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 CHRNA2Q15822 529 aa14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 FAM177A1Q8N128 213 aaPredicted RBP14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 MYO1BO43795 1136 aa14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 CTR9Q6PD62 1173 aa14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 USHBP1Q8N6Y0 703 aa14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 TRAPPC8Q9Y2L5 1435 aa14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 TNNT1P13805 278 aa14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 USP5P45974 858 aa14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 MCM10Q7L590 875 aa14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 IDH1O75874 414 aaKnown RBP14.29□□□□□ -0.12
PCDHGA6-201ENST00000517434 GLRX3O76003 335 aaKnown RBP14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 KRT18P05783 430 aaKnown RBP14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 FOSBP53539 338 aa14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 PTPRCP08575 1304 aa14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 TTLL12Q14166 644 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 CT47A1Q5JQC4 288 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 TXLNBQ8N3L3 684 aa14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 NYXQ9GZU5 481 aa14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 ZNHIT6Q9NWK9 470 aaKnown RBP14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 POLR3DP05423 398 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 ODF2Q5BJF6 829 aa14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 NBPF6Q5VWK0 638 aa14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 NBPF5PQ86XG9 351 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 NBPF4Q96M43 638 aa14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 CWC25Q9NXE8 425 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA6-201ENST00000517434 TNIP1Q15025 636 aa14.27□□□□□ -0.12
PCDHGA6-201ENST00000517434 SHANK2Q9UPX8 1470 aa14.27□□□□□ -0.12
PCDHGA6-201ENST00000517434 MICALCLQ6ZW33 695 aa14.27□□□□□ -0.12
PCDHGA6-201ENST00000517434 IMMTQ16891 758 aaKnown RBP14.27□□□□□ -0.13
PCDHGA6-201ENST00000517434 CCDC94Q9BW85 323 aaPredicted RBP14.27□□□□□ -0.13
PCDHGA6-201ENST00000517434 MNAT1P51948 309 aa14.27□□□□□ -0.13
PCDHGA6-201ENST00000517434 FAM193AP78312 1265 aa14.27□□□□□ -0.13
PCDHGA6-201ENST00000517434 STK38Q15208 465 aa14.27□□□□□ -0.13
PCDHGA6-201ENST00000517434 MAP3K11Q16584 847 aa14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 CCDC181Q5TID7 509 aa14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 SETDB2Q96T68 719 aa14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 HDAC9Q9UKV0 1011 aa14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 MAP9Q49MG5 647 aa14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 CCDC152Q4G0S7 254 aa14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 BMP2KQ9NSY1 1161 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 NEMFO60524 1076 aa14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 BAG3O95817 575 aa14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 XRCC6P12956 609 aaKnown RBP eCLIP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms