RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 PI4K2BQ8TCG2 481 aa8.11□□□□□ -1.11
CDH12-203ENST00000517378 NAP1L5Q96NT1 182 aaPredicted RBP8.11□□□□□ -1.11
CDH12-203ENST00000517378 TMEM63CQ9P1W3 806 aa8.11□□□□□ -1.11
CDH12-203ENST00000517378 RAD50Q92878 1312 aa8.1□□□□□ -1.11
CDH12-203ENST00000517378 RGPD2P0DJD1 1756 aa8.1□□□□□ -1.11
CDH12-203ENST00000517378 UNC5CLQ8IV45 518 aa8.1□□□□□ -1.11
CDH12-203ENST00000517378 KLHL34Q8N239 644 aa8.1□□□□□ -1.11
CDH12-203ENST00000517378 CHMP4AQ9BY43 222 aa8.1□□□□□ -1.11
CDH12-203ENST00000517378 ANO2Q9NQ90 1003 aa8.1□□□□□ -1.11
CDH12-203ENST00000517378 TERF1P54274 439 aa8.09□□□□□ -1.11
CDH12-203ENST00000517378 HDGFL1Q5TGJ6 251 aa8.09□□□□□ -1.11
CDH12-203ENST00000517378 TMEM87AQ8NBN3 555 aa8.09□□□□□ -1.11
CDH12-203ENST00000517378 UBE2Q2Q8WVN8 375 aa8.09□□□□□ -1.11
CDH12-203ENST00000517378 NOL7Q9UMY1 257 aaKnown RBP8.09□□□□□ -1.11
CDH12-203ENST00000517378 ZNF142P52746 1687 aaPredicted RBP8.09□□□□□ -1.11
CDH12-203ENST00000517378 ZNF500O60304 480 aaPredicted RBP8.09□□□□□ -1.11
CDH12-203ENST00000517378 TPM2P07951 284 aa8.09□□□□□ -1.11
CDH12-203ENST00000517378 MTX1Q13505 466 aa8.09□□□□□ -1.11
CDH12-203ENST00000517378 RILPL2Q969X0 211 aa8.09□□□□□ -1.11
CDH12-203ENST00000517378 SLIT3O75094 1523 aa8.09□□□□□ -1.11
CDH12-203ENST00000517378 RPAP1Q9BWH6 1393 aaPredicted RBP8.09□□□□□ -1.12
CDH12-203ENST00000517378 TRIM6-TRIM34B2RNG4 842 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 SGSM2O43147 1006 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 EIF4A1P60842 406 aaKnown RBP8.08□□□□□ -1.12
CDH12-203ENST00000517378 THEMISQ8N1K5 641 aaPredicted RBP8.08□□□□□ -1.12
CDH12-203ENST00000517378 RHPN1Q8TCX5 695 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 KIF1BPQ96EK5 621 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 TTC14Q96N46 770 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 IL25Q9H293 177 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 RBM27Q9P2N5 1060 aaKnown RBP8.08□□□□□ -1.12
CDH12-203ENST00000517378 OFD1O75665 1012 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
CDH12-203ENST00000517378 MCM5P33992 734 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 BEND3Q5T5X7 828 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 PPP1R42Q7Z4L9 355 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 IP6K1Q92551 441 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 NSFL1CQ9UNZ2 370 aaKnown RBP8.08□□□□□ -1.12
CDH12-203ENST00000517378 TTC41PQ6P2S7 1318 aa8.08□□□□□ -1.12
CDH12-203ENST00000517378 WDR33Q9C0J8 1336 aaKnown RBP8.08□□□□□ -1.12
CDH12-203ENST00000517378 HSP90AB4PQ58FF6 505 aa8.07□□□□□ -1.12
CDH12-203ENST00000517378 LSG1Q9H089 658 aaKnown RBP8.07□□□□□ -1.12
CDH12-203ENST00000517378 PHAXQ9H814 394 aaKnown RBP8.07□□□□□ -1.12
CDH12-203ENST00000517378 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.07□□□□□ -1.12
CDH12-203ENST00000517378 ADCY9O60503 1353 aa8.07□□□□□ -1.12
CDH12-203ENST00000517378 HEG1Q9ULI3 1381 aa8.07□□□□□ -1.12
CDH12-203ENST00000517378 RRP9O43818 475 aaKnown RBP8.07□□□□□ -1.12
CDH12-203ENST00000517378 KCNA6P17658 529 aa8.07□□□□□ -1.12
CDH12-203ENST00000517378 CEBPAP49715 358 aaPredicted RBP8.07□□□□□ -1.12
CDH12-203ENST00000517378 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.07□□□□□ -1.12
CDH12-203ENST00000517378 SYAP1Q96A49 352 aaPredicted RBP8.07□□□□□ -1.12
CDH12-203ENST00000517378 MRC1P22897 1456 aa8.07□□□□□ -1.12
CDH12-203ENST00000517378 SYCE3A1L190 88 aa8.07□□□□□ -1.12
CDH12-203ENST00000517378 MSNP26038 577 aaKnown RBP8.07□□□□□ -1.12
CDH12-203ENST00000517378 CNTROBQ8N137 903 aa8.07□□□□□ -1.12
CDH12-203ENST00000517378 ABTB2Q8N961 1025 aa8.07□□□□□ -1.12
CDH12-203ENST00000517378 DNAAF4Q8WXU2 420 aa8.07□□□□□ -1.12
CDH12-203ENST00000517378 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
CDH12-203ENST00000517378 SURF6O75683 361 aaKnown RBP8.06□□□□□ -1.12
CDH12-203ENST00000517378 KCNB2Q92953 911 aa8.06□□□□□ -1.12
CDH12-203ENST00000517378 CHAMP1Q96JM3 812 aa8.06□□□□□ -1.12
CDH12-203ENST00000517378 IL1RAPL2Q9NP60 686 aa8.06□□□□□ -1.12
CDH12-203ENST00000517378 SNX14Q9Y5W7 946 aa8.06□□□□□ -1.12
CDH12-203ENST00000517378 TCHHQ07283 1943 aa8.06□□□□□ -1.12
CDH12-203ENST00000517378 SRGAP3O43295 1099 aa8.06□□□□□ -1.12
CDH12-203ENST00000517378 PHF14O94880 888 aa8.06□□□□□ -1.12
CDH12-203ENST00000517378 NUTM1Q86Y26 1132 aa8.06□□□□□ -1.12
CDH12-203ENST00000517378 UPF3BQ9BZI7 483 aaKnown RBP8.06□□□□□ -1.12
CDH12-203ENST00000517378 ZKSCAN5Q9Y2L8 839 aa8.06□□□□□ -1.12
CDH12-203ENST00000517378 TRPM3Q9HCF6 1732 aaPredicted RBP8.05□□□□□ -1.12
CDH12-203ENST00000517378 PXDNQ92626 1479 aa8.05□□□□□ -1.12
CDH12-203ENST00000517378 NBPF7P0C2Y1 421 aaPredicted RBP8.05□□□□□ -1.12
CDH12-203ENST00000517378 AKAP4Q5JQC9 854 aa8.05□□□□□ -1.12
CDH12-203ENST00000517378 CHPF2Q9P2E5 772 aa8.05□□□□□ -1.12
CDH12-203ENST00000517378 ALDH1L1O75891 902 aa8.05□□□□□ -1.12
CDH12-203ENST00000517378 GLRX3O76003 335 aaKnown RBP8.05□□□□□ -1.12
CDH12-203ENST00000517378 TSPY26PQ9H489 355 aa8.05□□□□□ -1.12
CDH12-203ENST00000517378 CCDC39Q9UFE4 941 aa8.05□□□□□ -1.12
CDH12-203ENST00000517378 UTYO14607 1347 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 NBPF6Q5VWK0 638 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 FAM184AQ8NB25 1140 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 NBPF4Q96M43 638 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 SNRKQ9NRH2 765 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 PHF8Q9UPP1 1060 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 PI4KAP2A4QPH2 592 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 ZSCAN22P10073 491 aaPredicted RBP8.04□□□□□ -1.12
CDH12-203ENST00000517378 KIAA1211Q6ZU35 1233 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 RUFY3Q7L099 469 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 USHBP1Q8N6Y0 703 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 PI4KAP1Q8N8J0 262 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 KCNH5Q8NCM2 988 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 TM6SF1Q9BZW5 370 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 LIMCH1Q9UPQ0 1083 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 ABCC6O95255 1503 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 MST1RQ04912 1400 aa8.04□□□□□ -1.12
CDH12-203ENST00000517378 AK2P54819 239 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 UVSSAQ2YD98 709 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 NUTM2GQ5VZR2 741 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 USP48Q86UV5 1035 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 ERC1Q8IUD2 1116 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 LGR6Q9HBX8 967 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms