RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 PPP1R15AO75807 674 aaPredicted RBP3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 S1PR4O95977 384 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ZEB1P37275 1124 aaPredicted RBP3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 GGCXP38435 758 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 HSPA2P54652 639 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 KCNH2Q12809 1159 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 PTPRNQ16849 979 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 RGL3Q3MIN7 710 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ZNF326Q5BKZ1 582 aaKnown RBP3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ARMC2Q8NEN0 867 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 DCAF11Q8TEB1 546 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 SIRT1Q96EB6 747 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 GJD4Q96KN9 370 aaPredicted RBP3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 SIN3AQ96ST3 1273 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 TRIM34Q9BYJ4 488 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 C14orf93Q9H972 538 aaKnown RBP3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 PRDM9Q9NQV7 894 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 EVA1BQ9NVM1 165 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 MAP10Q9P2G4 905 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 FKBPLQ9UIM3 349 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 EIF3AQ14152 1382 aaKnown RBP3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ABCC11Q96J66 1382 aa3.12□□□□□ -1.91
SCARNA16.3-201ENST00000516595 DCCP43146 1447 aa3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 YTHDC2Q9H6S0 1430 aaKnown RBP3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 POM121CA8CG34 1229 aa3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 PPEF1O14829 653 aaPredicted RBP3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 DXOO77932 396 aaKnown RBP3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 EIF4G2P78344 907 aaKnown RBP eCLIP3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 PTK2Q05397 1052 aa3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 MSS51Q4VC12 460 aa3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ZBTB33Q86T24 672 aa3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 FNBP4Q8N3X1 1017 aaPredicted RBP3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 BAP1Q92560 729 aa3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 SERPINA10Q9UK55 444 aa3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ADGRB2O60241 1585 aa3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ROCK2O75116 1388 aaKnown RBP3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 METP08581 1390 aa3.11□□□□□ -1.91
SCARNA16.3-201ENST00000516595 PTPRUQ92729 1446 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 CHD2O14647 1828 aaKnown RBP3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 CDC42BPGQ6DT37 1551 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ZBBXA8MT70 800 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 SOCS7O14512 581 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 KCNA6P17658 529 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 RFX1P22670 979 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 MMP16P51512 607 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 NEUROD1Q13562 356 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 IRF5Q13568 498 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 NBPF8Q3BBV2 869 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 CFAP70Q5T0N1 1121 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 PTCRAQ6ISU1 281 aaPredicted RBP3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 CCDC82Q8N4S0 544 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ARHGAP9Q9BRR9 750 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 FCF1Q9Y324 198 aaKnown RBP3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 LTBP4Q8N2S1 1624 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ARHGEF28Q8N1W1 1705 aaKnown RBP3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ADGRL3Q9HAR2 1447 aa3.1□□□□□ -1.91
SCARNA16.3-201ENST00000516595 LRRC7Q96NW7 1537 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 MAGEB6P1A0A0J9YX57 407 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 CD2BP2O95400 341 aaKnown RBP3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 LINC01559Q495D7 138 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 NBPF14Q5TI25 921 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 PPP1R18Q6NYC8 613 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 PDXDC2PQ6P474 469 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 DZIP3Q86Y13 1208 aaKnown RBP3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 HOMEZQ8IX15 550 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 GLMNQ92990 594 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 PUS7Q96PZ0 661 aaKnown RBP3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 ARXQ96QS3 562 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 SLC26A8Q96RN1 970 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 CARD14Q9BXL6 1004 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 UNC93B1Q9H1C4 597 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 C1orf115Q9H7X2 142 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 PCDHB9Q9Y5E1 797 aa3.09□□□□□ -1.91
SCARNA16.3-201ENST00000516595 USP47Q96K76 1375 aa3.09□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ROBO2Q9HCK4 1378 aa3.09□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ANKARQ7Z5J8 1434 aa3.09□□□□□ -1.92
SCARNA16.3-201ENST00000516595 RNF223E7ERA6 249 aa3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 F12P00748 615 aaPredicted RBP3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 FBXO45P0C2W1 286 aa3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 SOX11P35716 441 aa3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 NR1H3Q13133 447 aa3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 NBPF1Q3BBV0 1214 aa3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 CARD11Q9BXL7 1154 aa3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 AMOTL2Q9Y2J4 779 aa3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ZNF335Q9H4Z2 1342 aaPredicted RBP3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 CENPJQ9HC77 1338 aaPredicted RBP3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TMEM94Q12767 1356 aa3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 NINLQ9Y2I6 1382 aa3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TULP4Q9NRJ4 1543 aa3.08□□□□□ -1.92
SCARNA16.3-201ENST00000516595 STRCP1A6NGW2 1772 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 LMOD1P29536 600 aaPredicted RBP3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ARID5BQ14865 1188 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 SLFNL1Q499Z3 407 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 CDCA8Q53HL2 280 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 BPHLQ86WA6 291 aaPredicted RBP3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ZNF592Q92610 1267 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 GPKOWQ92917 476 aaPredicted RBP eCLIP3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 FOXJ1Q92949 421 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 PRAM1Q96QH2 718 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms