RNA–Protein interactions for RNA: ENST00000514951.5

SMN1-209, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2 BASIC

Gene SMN1, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-209ENST00000514951 HMGB2P26583 209 aaKnown RBP24.94■■□□□ 1.58
SMN1-209ENST00000514951 CNTNAP4Q9C0A0 1308 aa24.94■■□□□ 1.58
SMN1-209ENST00000514951 SNRPA1P09661 255 aaKnown RBP24.93■■□□□ 1.58
SMN1-209ENST00000514951 PTGER2P43116 358 aa24.93■■□□□ 1.58
SMN1-209ENST00000514951 SPINK5Q9NQ38 1064 aaPredicted RBP24.93■■□□□ 1.58
SMN1-209ENST00000514951 GIGYF1O75420 1035 aaPredicted RBP24.92■■□□□ 1.58
SMN1-209ENST00000514951 CRKLP46109 303 aaKnown RBP24.92■■□□□ 1.58
SMN1-209ENST00000514951 TFCP2L1Q9NZI6 479 aa24.92■■□□□ 1.58
SMN1-209ENST00000514951 KRT24Q2M2I5 525 aa24.91■■□□□ 1.58
SMN1-209ENST00000514951 RC3H1Q5TC82 1133 aaKnown RBP24.91■■□□□ 1.58
SMN1-209ENST00000514951 AMIGO3Q86WK7 504 aa24.91■■□□□ 1.58
SMN1-209ENST00000514951 TSR2Q969E8 191 aaKnown RBP24.91■■□□□ 1.58
SMN1-209ENST00000514951 TEX13AQ9BXU3 409 aaPredicted RBP24.91■■□□□ 1.58
SMN1-209ENST00000514951 USP16Q9Y5T5 823 aa24.91■■□□□ 1.58
SMN1-209ENST00000514951 INTS5Q6P9B9 1019 aaKnown RBP24.9■■□□□ 1.58
SMN1-209ENST00000514951 AK7Q96M32 723 aa24.9■■□□□ 1.58
SMN1-209ENST00000514951 HNRNPUQ00839 825 aaKnown RBP eCLIP24.89■■□□□ 1.58
SMN1-209ENST00000514951 STARD3NLO95772 234 aa24.88■■□□□ 1.57
SMN1-209ENST00000514951 CCDC87Q9NVE4 849 aa24.88■■□□□ 1.57
SMN1-209ENST00000514951 PNPLA7Q6ZV29 1317 aa24.88■■□□□ 1.57
SMN1-209ENST00000514951 FANCIQ9NVI1 1328 aa24.88■■□□□ 1.57
SMN1-209ENST00000514951 GNPATO15228 680 aa24.87■■□□□ 1.57
SMN1-209ENST00000514951 MSH5O43196 834 aa24.87■■□□□ 1.57
SMN1-209ENST00000514951 SMIM5Q71RC9 77 aa24.87■■□□□ 1.57
SMN1-209ENST00000514951 FHDC1Q9C0D6 1143 aaPredicted RBP24.87■■□□□ 1.57
SMN1-209ENST00000514951 ZBTB1Q9Y2K1 713 aa24.86■■□□□ 1.57
SMN1-209ENST00000514951 GOLGA2Q08379 1002 aa24.86■■□□□ 1.57
SMN1-209ENST00000514951 KLHL34Q8N239 644 aa24.86■■□□□ 1.57
SMN1-209ENST00000514951 ARXQ96QS3 562 aa24.86■■□□□ 1.57
SMN1-209ENST00000514951 RPS6KA4O75676 772 aa24.85■■□□□ 1.57
SMN1-209ENST00000514951 A1BGP04217 495 aa24.85■■□□□ 1.57
SMN1-209ENST00000514951 C8orf58Q8NAV2 365 aa24.85■■□□□ 1.57
SMN1-209ENST00000514951 C4AP0C0L4 1744 aa24.84■■□□□ 1.57
SMN1-209ENST00000514951 SSFA2P28290 1259 aa24.84■■□□□ 1.57
SMN1-209ENST00000514951 DUSP27Q5VZP5 1158 aa24.84■■□□□ 1.57
SMN1-209ENST00000514951 SGIP1Q9BQI5 828 aa24.84■■□□□ 1.57
SMN1-209ENST00000514951 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.83■■□□□ 1.56
SMN1-209ENST00000514951 PHF14O94880 888 aa24.83■■□□□ 1.56
SMN1-209ENST00000514951 POLD1P28340 1107 aa24.83■■□□□ 1.56
SMN1-209ENST00000514951 COL23A1Q86Y22 540 aaPredicted RBP24.83■■□□□ 1.56
SMN1-209ENST00000514951 SLC16A10Q8TF71 515 aa24.83■■□□□ 1.56
SMN1-209ENST00000514951 CDCA7LQ96GN5 454 aa24.83■■□□□ 1.56
SMN1-209ENST00000514951 MYH16Q9H6N6 1097 aa24.83■■□□□ 1.56
SMN1-209ENST00000514951 RTCBQ9Y3I0 505 aaKnown RBP24.83■■□□□ 1.56
SMN1-209ENST00000514951 SOS1Q07889 1333 aaPredicted RBP24.82■■□□□ 1.56
SMN1-209ENST00000514951 HOXB7P09629 217 aa24.82■■□□□ 1.56
SMN1-209ENST00000514951 CANXP27824 592 aaKnown RBP24.82■■□□□ 1.56
SMN1-209ENST00000514951 SLFN5Q08AF3 891 aa24.82■■□□□ 1.56
SMN1-209ENST00000514951 SYT17Q9BSW7 474 aa24.82■■□□□ 1.56
SMN1-209ENST00000514951 NBPF26B4DH59 902 aa24.81■■□□□ 1.56
SMN1-209ENST00000514951 E9PSI1 815 aa24.81■■□□□ 1.56
SMN1-209ENST00000514951 YY1P25490 414 aa24.81■■□□□ 1.56
SMN1-209ENST00000514951 PIP4K2AP48426 406 aaPredicted RBP24.81■■□□□ 1.56
SMN1-209ENST00000514951 NBPF10Q6P3W6 841 aaKnown RBP24.81■■□□□ 1.56
SMN1-209ENST00000514951 NBPF15Q8N660 670 aa24.81■■□□□ 1.56
SMN1-209ENST00000514951 TSPYL6Q8N831 410 aa24.81■■□□□ 1.56
SMN1-209ENST00000514951 ELL2O00472 640 aaPredicted RBP24.8■■□□□ 1.56
SMN1-209ENST00000514951 FLAD1Q8NFF5 587 aa24.8■■□□□ 1.56
SMN1-209ENST00000514951 ADRA2BP18089 450 aa24.79■■□□□ 1.56
SMN1-209ENST00000514951 EIF2S2P20042 333 aaKnown RBP24.79■■□□□ 1.56
SMN1-209ENST00000514951 EIF5P55010 431 aaKnown RBP24.79■■□□□ 1.56
SMN1-209ENST00000514951 ZBED9Q6R2W3 1325 aa24.79■■□□□ 1.56
SMN1-209ENST00000514951 COL15A1P39059 1388 aa24.78■■□□□ 1.56
SMN1-209ENST00000514951 IL6STP40189 918 aaPredicted RBP24.78■■□□□ 1.56
SMN1-209ENST00000514951 EXOSC9Q06265 439 aaKnown RBP24.78■■□□□ 1.56
SMN1-209ENST00000514951 TRAPPC3LQ5T215 181 aa24.78■■□□□ 1.56
SMN1-209ENST00000514951 TRMT2AQ8IZ69 625 aaKnown RBP24.78■■□□□ 1.56
SMN1-209ENST00000514951 ARHGEF1Q92888 912 aaKnown RBP24.78■■□□□ 1.56
SMN1-209ENST00000514951 NECTIN2Q92692 538 aa24.77■■□□□ 1.56
SMN1-209ENST00000514951 ERBB4Q15303 1308 aa24.76■■□□□ 1.55
SMN1-209ENST00000514951 PDIA6Q15084 440 aa24.76■■□□□ 1.55
SMN1-209ENST00000514951 HDGFL1Q5TGJ6 251 aa24.76■■□□□ 1.55
SMN1-209ENST00000514951 TWISTNBQ3B726 338 aaPredicted RBP24.75■■□□□ 1.55
SMN1-209ENST00000514951 MSL1Q68DK7 614 aa24.75■■□□□ 1.55
SMN1-209ENST00000514951 PROSER3Q2NL68 480 aa24.74■■□□□ 1.55
SMN1-209ENST00000514951 LRP10Q7Z4F1 713 aa24.74■■□□□ 1.55
SMN1-209ENST00000514951 ZNF330Q9Y3S2 320 aaPredicted RBP24.73■■□□□ 1.55
SMN1-209ENST00000514951 COL24A1Q17RW2 1714 aa24.73■■□□□ 1.55
SMN1-209ENST00000514951 VAMP4O75379 141 aa24.72■■□□□ 1.55
SMN1-209ENST00000514951 ANXA1P04083 346 aa24.72■■□□□ 1.55
SMN1-209ENST00000514951 MYL6BP14649 208 aa24.72■■□□□ 1.55
SMN1-209ENST00000514951 RFC4P35249 363 aa24.72■■□□□ 1.55
SMN1-209ENST00000514951 CHPF2Q9P2E5 772 aa24.72■■□□□ 1.55
SMN1-209ENST00000514951 USP42Q9H9J4 1324 aaKnown RBP24.71■■□□□ 1.55
SMN1-209ENST00000514951 SCN7AQ01118 1682 aa24.71■■□□□ 1.55
SMN1-209ENST00000514951 SRP68Q9UHB9 627 aaKnown RBP24.71■■□□□ 1.55
SMN1-209ENST00000514951 BCORQ6W2J9 1755 aa24.7■■□□□ 1.55
SMN1-209ENST00000514951 DDX21Q9NR30 783 aaKnown RBP eCLIP24.7■■□□□ 1.54
SMN1-209ENST00000514951 A0A087WZG4 1122 aa24.69■■□□□ 1.54
SMN1-209ENST00000514951 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
SMN1-209ENST00000514951 NARFQ9UHQ1 456 aa24.69■■□□□ 1.54
SMN1-209ENST00000514951 TBC1D2BQ9UPU7 963 aa24.69■■□□□ 1.54
SMN1-209ENST00000514951 DBF4Q9UBU7 674 aaPredicted RBP24.68■■□□□ 1.54
SMN1-209ENST00000514951 GYS1P13807 737 aa24.67■■□□□ 1.54
SMN1-209ENST00000514951 GPR162Q16538 588 aa24.67■■□□□ 1.54
SMN1-209ENST00000514951 CCDC30Q5VVM6 783 aa24.67■■□□□ 1.54
SMN1-209ENST00000514951 DZIP3Q86Y13 1208 aaKnown RBP24.67■■□□□ 1.54
SMN1-209ENST00000514951 USPL1Q5W0Q7 1092 aa24.66■■□□□ 1.54
SMN1-209ENST00000514951 NPM2Q86SE8 214 aaKnown RBP24.66■■□□□ 1.54
SMN1-209ENST00000514951 BCL2L12Q9HB09 334 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms