RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 XPCQ01831 940 aaPredicted RBP9.66□□□□□ -0.86
HTT-208ENST00000510626 ZNF692Q9BU19 519 aaPredicted RBP9.66□□□□□ -0.86
HTT-208ENST00000510626 THOC2Q8NI27 1593 aaKnown RBP9.66□□□□□ -0.86
HTT-208ENST00000510626 PTPRCP08575 1304 aa9.66□□□□□ -0.86
HTT-208ENST00000510626 IQCDQ96DY2 449 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 FERMT1Q9BQL6 677 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 RMND1Q9NWS8 449 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 CTAGE9A4FU28 777 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 HDAC1Q13547 482 aaPredicted RBP9.65□□□□□ -0.86
HTT-208ENST00000510626 GOLGA1Q92805 767 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 AIMP1Q12904 312 aaKnown RBP9.65□□□□□ -0.86
HTT-208ENST00000510626 UBAC1Q9BSL1 405 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 A0A087WZG4 1122 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 NCAPD3P42695 1498 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 A0A1B0GUL7 405 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 AMPD3Q01432 767 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 ARMC9Q7Z3E5 817 aa9.65□□□□□ -0.86
HTT-208ENST00000510626 URI1O94763 535 aaPredicted RBP9.65□□□□□ -0.87
HTT-208ENST00000510626 JPH4Q96JJ6 628 aa9.65□□□□□ -0.87
HTT-208ENST00000510626 IBTKQ9P2D0 1353 aaPredicted RBP9.65□□□□□ -0.87
HTT-208ENST00000510626 C16orf45Q96MC5 204 aaPredicted RBP9.65□□□□□ -0.87
HTT-208ENST00000510626 TTC12Q9H892 705 aaPredicted RBP9.65□□□□□ -0.87
HTT-208ENST00000510626 HECW1Q76N89 1606 aa9.65□□□□□ -0.87
HTT-208ENST00000510626 ZNF622Q969S3 477 aaKnown RBP eCLIP9.64□□□□□ -0.874e-6■□□□□ 10.8
HTT-208ENST00000510626 TANGO6Q9C0B7 1094 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 SUDS3Q9H7L9 328 aaPredicted RBP9.64□□□□□ -0.87
HTT-208ENST00000510626 MX1P20591 662 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.64□□□□□ -0.87
HTT-208ENST00000510626 DAAM2Q86T65 1068 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 NEUROD6Q96NK8 337 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 WDR97A6NE52 1622 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 FSD2A1L4K1 749 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 CCDC155Q8N6L0 562 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 CTAGE15A4D2H0 777 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 CTAGE8P0CG41 777 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 RNF187Q5TA31 235 aaPredicted RBP9.64□□□□□ -0.87
HTT-208ENST00000510626 CTAGE6Q86UF2 777 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 CTAGE4Q8IX94 777 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 IFT74Q96LB3 600 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 HDXQ7Z353 690 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 ZNF165P49910 485 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 INTS4Q96HW7 963 aaKnown RBP9.64□□□□□ -0.87
HTT-208ENST00000510626 RNF41Q9H4P4 317 aaPredicted RBP9.64□□□□□ -0.87
HTT-208ENST00000510626 NOLC1Q14978 699 aaKnown RBP eCLIP9.64□□□□□ -0.87
HTT-208ENST00000510626 CNPY4Q8N129 248 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 RAPGEF4Q8WZA2 1011 aa9.64□□□□□ -0.87
HTT-208ENST00000510626 FGD5Q6ZNL6 1462 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 ARFGAP2Q8N6H7 521 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 SOGA3Q5TF21 947 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 SLMAPQ14BN4 828 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 TTC39AQ5SRH9 613 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 LMBR1Q8WVP7 490 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 GAPVD1Q14C86 1478 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 CCDC77Q9BR77 488 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 CCDC12Q8WUD4 166 aaPredicted RBP9.63□□□□□ -0.87
HTT-208ENST00000510626 IGF1RP08069 1367 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 ATP8B1O43520 1251 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 BAG4O95429 457 aaKnown RBP9.63□□□□□ -0.87
HTT-208ENST00000510626 NUP88Q99567 741 aaPredicted RBP9.63□□□□□ -0.87
HTT-208ENST00000510626 ZMYM4Q5VZL5 1548 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 CEP83Q9Y592 693 aa9.63□□□□□ -0.87
HTT-208ENST00000510626 STX6O43752 255 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 AACSQ86V21 672 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 AKAP2Q9Y2D5 859 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 ARHGAP45Q92619 1136 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 CCDC9Q9Y3X0 531 aaKnown RBP9.62□□□□□ -0.87
HTT-208ENST00000510626 LUC7L3O95232 432 aaKnown RBP9.62□□□□□ -0.87
HTT-208ENST00000510626 MSH5O43196 834 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 RALGAPBQ86X10 1494 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 MPHOSPH10O00566 681 aaKnown RBP9.62□□□□□ -0.87
HTT-208ENST00000510626 TDO2P48775 406 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 ZBTB17Q13105 803 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 KCNG4Q8TDN1 519 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 DHX37Q8IY37 1157 aaKnown RBP9.62□□□□□ -0.87
HTT-208ENST00000510626 UTP14AQ9BVJ6 771 aaKnown RBP9.62□□□□□ -0.87
HTT-208ENST00000510626 NCOA1Q15788 1441 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 ATAD2BQ9ULI0 1458 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 EXOSC9Q06265 439 aaKnown RBP9.62□□□□□ -0.87
HTT-208ENST00000510626 SELENOOQ9BVL4 669 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 C9orf84Q5VXU9 1444 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 STXBP4Q6ZWJ1 553 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 XRCC6P12956 609 aaKnown RBP eCLIP9.62□□□□□ -0.87
HTT-208ENST00000510626 CCDC102BQ68D86 513 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 RPGRIP1Q96KN7 1286 aa9.62□□□□□ -0.87
HTT-208ENST00000510626 STIM2Q9P246 746 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 TIAM1Q13009 1591 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 SLC4A2P04920 1241 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 FOSBP53539 338 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 KIF1CO43896 1103 aaKnown RBP9.61□□□□□ -0.87
HTT-208ENST00000510626 LTV1Q96GA3 475 aaPredicted RBP9.61□□□□□ -0.87
HTT-208ENST00000510626 ATP5DP30049 168 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 CCDC178Q5BJE1 867 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 ALDH3A1P30838 453 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 PRKAR2BP31323 418 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 VAV2P52735 878 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 C8orf76Q96K31 380 aa9.61□□□□□ -0.87
HTT-208ENST00000510626 SEC63Q9UGP8 760 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms