RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SYAP1Q96A49 352 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 KIAA1468Q9P260 1216 aa6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 CLTCQ00610 1675 aaKnown RBP6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 CAMSAP1Q5T5Y3 1602 aa6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 NEXMIFQ5QGS0 1516 aa6.09□□□□□ -1.44
HMGB3P16-201ENST00000508037 FYB1O15117 783 aa6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 HMMRO75330 724 aa6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 PRKAR2BP31323 418 aa6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 MLLT3P42568 568 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 PRIM1P49642 420 aaKnown RBP6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 TTC22Q5TAA0 569 aa6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 PACS2Q86VP3 889 aa6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 KIF2CQ99661 725 aa6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 GGNBP2Q9H3C7 697 aa6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 CCDC39Q9UFE4 941 aa6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 ATP7BP35670 1465 aa6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 CPSF1Q10570 1443 aaKnown RBP6.08□□□□□ -1.44
HMGB3P16-201ENST00000508037 ZNF500O60304 480 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 VAMP4O75379 141 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 MCCP23508 829 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 SSFA2P28290 1259 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 PRSS12P56730 875 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 SMYD5Q6GMV2 418 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 GGT6Q6P531 493 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 KIAA1211Q6ZU35 1233 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 LAPTM4BQ86VI4 370 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 GAS2L3Q86XJ1 694 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 GAS2L2Q8NHY3 880 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 WNT2BQ93097 391 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 PKNOX2Q96KN3 472 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 DCTPP1Q9H773 170 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 NOL7Q9UMY1 257 aaKnown RBP6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 LRRC7Q96NW7 1537 aa6.07□□□□□ -1.44
HMGB3P16-201ENST00000508037 KIF20BQ96Q89 1820 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 PTPRCP08575 1304 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 ERBB4Q15303 1308 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 DLC1Q96QB1 1528 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 SEMA3EO15041 775 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 CYP2E1P05181 493 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 ZNF853P0CG23 659 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 NCLP19338 710 aaKnown RBP6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 TWISTNBQ3B726 338 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 MCTP1Q6DN14 999 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 PLEKHM2Q8IWE5 1019 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 ANKRD44Q8N8A2 993 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 PDLIM2Q96JY6 352 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 USP26Q9BXU7 913 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 PTPRMP28827 1452 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 NEO1Q92859 1461 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 CDK12Q9NYV4 1490 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 YTHDC2Q9H6S0 1430 aaKnown RBP6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 AATKQ6ZMQ8 1374 aa6.06□□□□□ -1.44
HMGB3P16-201ENST00000508037 ERC2O15083 957 aa6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 EPB41L2O43491 1005 aaKnown RBP6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 ZSCAN23Q3MJ62 389 aa6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 CAVIN1Q6NZI2 390 aaKnown RBP6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 LRSAM1Q6UWE0 723 aa6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 ANKK1Q8NFD2 765 aa6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 PRAM1Q96QH2 718 aa6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 CDHR5Q9HBB8 845 aa6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 LMBRD1Q9NUN5 540 aa6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 TSKSQ9UJT2 592 aa6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 EDC4Q6P2E9 1401 aaKnown RBP6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 KIAA0232Q92628 1395 aa6.05□□□□□ -1.44
HMGB3P16-201ENST00000508037 MINK1Q8N4C8 1332 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 CD163L1Q9NR16 1453 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 DYNC1I1O14576 645 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 LETM1O95202 739 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 PTPN5P54829 565 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 ANAPC15P60006 121 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 FAM98CQ17RN3 349 aaKnown RBP6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 THSD4Q6ZMP0 1018 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 FAM184AQ8NB25 1140 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 INTS4Q96HW7 963 aaKnown RBP6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 CDK19Q9BWU1 502 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 MBIPQ9NS73 344 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 STK26Q9P289 416 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 RBM27Q9P2N5 1060 aaKnown RBP6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 POLKQ9UBT6 870 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 SEPT9Q9UHD8 586 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 ZKSCAN5Q9Y2L8 839 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 ARHGEF40Q8TER5 1519 aa6.04□□□□□ -1.44
HMGB3P16-201ENST00000508037 SSH2Q76I76 1423 aa6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 RIMS2Q9UQ26 1411 aa6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 NUTM2FA1L443 756 aa6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 NBPF26B4DH59 902 aa6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 CD2BP2O95400 341 aaKnown RBP6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 GSPT1P15170 499 aaKnown RBP6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 SAFB2Q14151 953 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 UVSSAQ2YD98 709 aa6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 SASS6Q6UVJ0 657 aa6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 SIRT2Q8IXJ6 389 aa6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 ZFRQ96KR1 1074 aaKnown RBP6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 ZMYND15Q9H091 742 aa6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 TSPY26PQ9H489 355 aa6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 OSBPL3Q9H4L5 887 aa6.03□□□□□ -1.44
HMGB3P16-201ENST00000508037 TESPA1A2RU30 521 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P16-201ENST00000508037 PRPF40AO75400 957 aaKnown RBP6.02□□□□□ -1.45
HMGB3P16-201ENST00000508037 PTMAP06454 111 aaKnown RBP6.02□□□□□ -1.45
HMGB3P16-201ENST00000508037 TPM3P06753 285 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms