RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TLL2Q9Y6L7 1015 aa5.07□□□□□ -1.6
TCOF1-208ENST00000506063 BCORQ6W2J9 1755 aa5.06□□□□□ -1.6
TCOF1-208ENST00000506063 IQCA1LA6NCM1 817 aa5.06□□□□□ -1.6
TCOF1-208ENST00000506063 POLRMTO00411 1230 aaKnown RBP5.06□□□□□ -1.6
TCOF1-208ENST00000506063 FKBP8Q14318 412 aa5.06□□□□□ -1.6
TCOF1-208ENST00000506063 CIAPIN1Q6FI81 312 aa5.06□□□□□ -1.6
TCOF1-208ENST00000506063 MPRIPQ6WCQ1 1025 aa5.06□□□□□ -1.6
TCOF1-208ENST00000506063 PIGBQ92521 554 aa5.06□□□□□ -1.6
TCOF1-208ENST00000506063 SMARCC1Q92922 1105 aaPredicted RBP5.06□□□□□ -1.6
TCOF1-208ENST00000506063 SLC4A9Q96Q91 983 aa5.06□□□□□ -1.6
TCOF1-208ENST00000506063 COL25A1Q9BXS0 654 aaPredicted RBP5.06□□□□□ -1.6
TCOF1-208ENST00000506063 CD163L1Q9NR16 1453 aa5.06□□□□□ -1.6
TCOF1-208ENST00000506063 PRUNE2Q8WUY3 3088 aa5.05□□□□□ -1.6
TCOF1-208ENST00000506063 TTC21AQ8NDW8 1320 aa5.05□□□□□ -1.6
TCOF1-208ENST00000506063 LTBP3Q9NS15 1303 aa5.05□□□□□ -1.6
TCOF1-208ENST00000506063 CYP27B1O15528 508 aa5.05□□□□□ -1.6
TCOF1-208ENST00000506063 TM4SF1P30408 202 aa5.05□□□□□ -1.6
TCOF1-208ENST00000506063 GRM1Q13255 1194 aa5.05□□□□□ -1.6
TCOF1-208ENST00000506063 SAPCD2Q86UD0 394 aa5.05□□□□□ -1.6
TCOF1-208ENST00000506063 OTUD5Q96G74 571 aa5.05□□□□□ -1.6
TCOF1-208ENST00000506063 SMG6Q86US8 1419 aaKnown RBP5.05□□□□□ -1.6
TCOF1-208ENST00000506063 CARMIL3Q8ND23 1372 aa5.04□□□□□ -1.6
TCOF1-208ENST00000506063 LAMA2P24043 3122 aaKnown RBP5.04□□□□□ -1.6
TCOF1-208ENST00000506063 ZNF541Q9H0D2 1346 aa5.04□□□□□ -1.6
TCOF1-208ENST00000506063 TJP1Q07157 1748 aa5.04□□□□□ -1.6
TCOF1-208ENST00000506063 TRAF5O00463 557 aa5.04□□□□□ -1.6
TCOF1-208ENST00000506063 ADRA2BP18089 450 aa5.04□□□□□ -1.6
TCOF1-208ENST00000506063 EPHX2P34913 555 aa5.04□□□□□ -1.6
TCOF1-208ENST00000506063 APLP2Q06481 763 aa5.04□□□□□ -1.6
TCOF1-208ENST00000506063 EAPPQ56P03 285 aaPredicted RBP5.04□□□□□ -1.6
TCOF1-208ENST00000506063 TRAPPC3LQ5T215 181 aa5.04□□□□□ -1.6
TCOF1-208ENST00000506063 PAXIP1Q6ZW49 1069 aaPredicted RBP5.04□□□□□ -1.6
TCOF1-208ENST00000506063 TTLL6Q8N841 843 aa5.04□□□□□ -1.6
TCOF1-208ENST00000506063 SRP68Q9UHB9 627 aaKnown RBP5.04□□□□□ -1.6
TCOF1-208ENST00000506063 ASAP1Q9ULH1 1129 aa5.04□□□□□ -1.6
TCOF1-208ENST00000506063 TTC28Q96AY4 2481 aa5.03□□□□□ -1.6
TCOF1-208ENST00000506063 MAP3K19Q56UN5 1328 aa5.03□□□□□ -1.6
TCOF1-208ENST00000506063 CNTNAP4Q9C0A0 1308 aa5.03□□□□□ -1.6
TCOF1-208ENST00000506063 USP42Q9H9J4 1324 aaKnown RBP5.03□□□□□ -1.6
TCOF1-208ENST00000506063 COL4A5P29400 1685 aa5.03□□□□□ -1.6
TCOF1-208ENST00000506063 SRPK2P78362 688 aaKnown RBP5.03□□□□□ -1.6
TCOF1-208ENST00000506063 CTU1Q7Z7A3 348 aaKnown RBP5.03□□□□□ -1.6
TCOF1-208ENST00000506063 IP6K1Q92551 441 aa5.03□□□□□ -1.6
TCOF1-208ENST00000506063 HHIPL1Q96JK4 782 aa5.03□□□□□ -1.6
TCOF1-208ENST00000506063 RTCBQ9Y3I0 505 aaKnown RBP5.03□□□□□ -1.6
TCOF1-208ENST00000506063 POLR2AP24928 1970 aaKnown RBP5.03□□□□□ -1.6
TCOF1-208ENST00000506063 SBNO2Q9Y2G9 1366 aa5.03□□□□□ -1.6
TCOF1-208ENST00000506063 RNF123Q5XPI4 1314 aa5.02□□□□□ -1.61
TCOF1-208ENST00000506063 POTEFA5A3E0 1075 aa5.02□□□□□ -1.61
TCOF1-208ENST00000506063 RPS6KA4O75676 772 aa5.02□□□□□ -1.61
TCOF1-208ENST00000506063 ATP6V1AP38606 617 aa5.02□□□□□ -1.61
TCOF1-208ENST00000506063 NKX1-1Q15270 411 aaPredicted RBP5.02□□□□□ -1.61
TCOF1-208ENST00000506063 RC3H1Q5TC82 1133 aaKnown RBP5.02□□□□□ -1.61
TCOF1-208ENST00000506063 SAGE1Q9NXZ1 904 aa5.02□□□□□ -1.61
TCOF1-208ENST00000506063 HACL1Q9UJ83 578 aa5.02□□□□□ -1.61
TCOF1-208ENST00000506063 CGNL1Q0VF96 1302 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 PCDH11XQ9BZA7 1347 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 PCDH11YQ9BZA8 1340 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 ANKRD26Q9UPS8 1709 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 FAM155AB1AL88 458 aaPredicted RBP5.01□□□□□ -1.61
TCOF1-208ENST00000506063 C21orf2O43822 256 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 RFC4P35249 363 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 NBPF6Q5VWK0 638 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 PNMA8AQ86V59 439 aaPredicted RBP5.01□□□□□ -1.61
TCOF1-208ENST00000506063 NME9Q86XW9 330 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 LTV1Q96GA3 475 aaPredicted RBP5.01□□□□□ -1.61
TCOF1-208ENST00000506063 NBPF4Q96M43 638 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 MPHOSPH9Q99550 1183 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 ZNF692Q9BU19 519 aaPredicted RBP5.01□□□□□ -1.61
TCOF1-208ENST00000506063 TAOK3Q9H2K8 898 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 PRO3102Q9H379 93 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 PRDM6Q9NQX0 595 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 ATG3Q9NT62 314 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 CLEC11AQ9Y240 323 aa5.01□□□□□ -1.61
TCOF1-208ENST00000506063 NCAPD2Q15021 1401 aa5□□□□□ -1.61
TCOF1-208ENST00000506063 SNED1Q8TER0 1413 aa5□□□□□ -1.61
TCOF1-208ENST00000506063 LOC105371045A0A1W2PR82 267 aa5□□□□□ -1.61
TCOF1-208ENST00000506063 HOXC9P31274 260 aa5□□□□□ -1.61
TCOF1-208ENST00000506063 USHBP1Q8N6Y0 703 aa5□□□□□ -1.61
TCOF1-208ENST00000506063 RNF186Q9NXI6 227 aa5□□□□□ -1.61
TCOF1-208ENST00000506063 ERBB4Q15303 1308 aa4.99□□□□□ -1.61
TCOF1-208ENST00000506063 CACNA1AO00555 2505 aa4.99□□□□□ -1.61
TCOF1-208ENST00000506063 SOX1O00570 391 aaPredicted RBP4.99□□□□□ -1.61
TCOF1-208ENST00000506063 HOXD11P31277 338 aaPredicted RBP4.99□□□□□ -1.61
TCOF1-208ENST00000506063 NOGQ13253 232 aa4.99□□□□□ -1.61
TCOF1-208ENST00000506063 NFIXQ14938 502 aa4.99□□□□□ -1.61
TCOF1-208ENST00000506063 C2CD5Q86YS7 1000 aa4.99□□□□□ -1.61
TCOF1-208ENST00000506063 C7orf43Q8WVR3 580 aa4.99□□□□□ -1.61
TCOF1-208ENST00000506063 RBM27Q9P2N5 1060 aaKnown RBP4.99□□□□□ -1.61
TCOF1-208ENST00000506063 RAPGEFL1Q9UHV5 662 aa4.99□□□□□ -1.61
TCOF1-208ENST00000506063 KTN1Q86UP2 1357 aaKnown RBP4.99□□□□□ -1.61
TCOF1-208ENST00000506063 CENPJQ9HC77 1338 aaPredicted RBP4.98□□□□□ -1.61
TCOF1-208ENST00000506063 H0YGN5 161 aa4.98□□□□□ -1.61
TCOF1-208ENST00000506063 FZD9O00144 591 aa4.98□□□□□ -1.61
TCOF1-208ENST00000506063 TRPA1O75762 1119 aa4.98□□□□□ -1.61
TCOF1-208ENST00000506063 CELF2O95319 508 aaKnown RBP4.98□□□□□ -1.61
TCOF1-208ENST00000506063 SCNN1DP51172 638 aa4.98□□□□□ -1.61
TCOF1-208ENST00000506063 PKN2Q16513 984 aaKnown RBP4.98□□□□□ -1.61
TCOF1-208ENST00000506063 BCL2L12Q9HB09 334 aa4.98□□□□□ -1.61
TCOF1-208ENST00000506063 KDM2AQ9Y2K7 1162 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms