RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 ERCC4Q92889 916 aaPredicted RBP9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 NSFL1CQ9UNZ2 370 aaKnown RBP9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 ATAD2Q6PL18 1390 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 HMMRO75330 724 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 PTPN14Q15678 1187 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 NOL7Q9UMY1 257 aaKnown RBP9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 RGPD3A6NKT7 1758 aaPredicted RBP9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 RGPD4Q7Z3J3 1758 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 FSD2A1L4K1 749 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 KIF3BO15066 747 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 RAB3GAP1Q15042 981 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 LRSAM1Q6UWE0 723 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 CWC27Q6UX04 472 aaKnown RBP9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 TSPYL1Q9H0U9 437 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 CIZ1Q9ULV3 898 aaPredicted RBP9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 LRPPRCP42704 1394 aaKnown RBP9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 TMEM2Q9UHN6 1383 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 CCDC144AA2RUR9 1427 aa9.3□□□□□ -0.92
ATP2C1-208ENST00000504948 F6X3S4 739 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 PRKAR2BP31323 418 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 LUZP1Q86V48 1076 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 NUTM1Q86Y26 1132 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 ANKRD26Q9UPS8 1709 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 CCDC192P0DO97 292 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 PDE6BP35913 854 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 FKBP15Q5T1M5 1219 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 NEK11Q8NG66 645 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 NOL10Q9BSC4 688 aaKnown RBP9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 A0A087WWV3 80 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 LETM1O95202 739 aaPredicted RBP9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 NECAB1Q8N987 351 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 UBXN4Q92575 508 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 STK31Q9BXU1 1019 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 LIG1P18858 919 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 MCM6Q14566 821 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 USP48Q86UV5 1035 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 ARGLU1Q9NWB6 273 aaPredicted RBP9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 ATP6V1DQ9Y5K8 247 aa9.29□□□□□ -0.92
ATP2C1-208ENST00000504948 ANTXR1Q9H6X2 564 aa9.28□□□□□ -0.92
ATP2C1-208ENST00000504948 CLIP2Q9UDT6 1046 aa9.28□□□□□ -0.92
ATP2C1-208ENST00000504948 HSP90B2PQ58FF3 399 aa9.28□□□□□ -0.92
ATP2C1-208ENST00000504948 SIL1Q9H173 461 aa9.28□□□□□ -0.92
ATP2C1-208ENST00000504948 SPG7Q9UQ90 795 aa9.28□□□□□ -0.92
ATP2C1-208ENST00000504948 GTF2A1P52655 376 aaPredicted RBP9.28□□□□□ -0.92
ATP2C1-208ENST00000504948 LEKR1Q6ZMV7 388 aa9.28□□□□□ -0.92
ATP2C1-208ENST00000504948 DRC1Q96MC2 740 aa9.28□□□□□ -0.92
ATP2C1-208ENST00000504948 SF3A3Q12874 501 aaKnown RBP eCLIP9.27□□□□□ -0.925e-6■■□□□ 14.3
ATP2C1-208ENST00000504948 LARP1BQ659C4 914 aaKnown RBP9.27□□□□□ -0.93
ATP2C1-208ENST00000504948 PTPRUQ92729 1446 aa9.27□□□□□ -0.93
ATP2C1-208ENST00000504948 RNF123Q5XPI4 1314 aa9.27□□□□□ -0.93
ATP2C1-208ENST00000504948 SURF6O75683 361 aaKnown RBP9.27□□□□□ -0.93
ATP2C1-208ENST00000504948 ELF2Q15723 593 aa9.27□□□□□ -0.93
ATP2C1-208ENST00000504948 PIK3C2GO75747 1445 aa9.27□□□□□ -0.93
ATP2C1-208ENST00000504948 MON2Q7Z3U7 1717 aa9.27□□□□□ -0.93
ATP2C1-208ENST00000504948 TMX3Q96JJ7 454 aa9.27□□□□□ -0.93
ATP2C1-208ENST00000504948 STAC3Q96MF2 364 aa9.27□□□□□ -0.93
ATP2C1-208ENST00000504948 NUP62CLQ9H1M0 184 aa9.27□□□□□ -0.93
ATP2C1-208ENST00000504948 ERC2O15083 957 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 KRT222Q8N1A0 295 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 RSPH14Q9UHP6 348 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 PTPN21Q16825 1174 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 RAB11FIP4Q86YS3 637 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 ST7Q9NRC1 585 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 CALCOCO1Q9P1Z2 691 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 USP19O94966 1318 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 DMTNQ08495 405 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 TMCO3Q6UWJ1 677 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 FAM107BQ9H098 131 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 CCDC73Q6ZRK6 1079 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 CCDC191Q8NCU4 936 aa9.26□□□□□ -0.93
ATP2C1-208ENST00000504948 ME1P48163 572 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 DNM1Q05193 864 aaKnown RBP9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 TWISTNBQ3B726 338 aaPredicted RBP9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 HINFPQ9BQA5 517 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 DEF6Q9H4E7 631 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 DIAPH1O60610 1272 aaKnown RBP9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 DNA2P51530 1060 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 CPLX3Q8WVH0 158 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 JAKMIP1Q96N16 626 aaKnown RBP9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 DNAJC25Q9H1X3 360 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 PYCARDQ9ULZ3 195 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 TPM3P06753 285 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 CASTP20810 708 aaKnown RBP9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 GTF2E1P29083 439 aaPredicted RBP9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 E2F4Q16254 413 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 CEP135Q66GS9 1140 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 MYRIPQ8NFW9 859 aa9.25□□□□□ -0.93
ATP2C1-208ENST00000504948 GTPBP4Q9BZE4 634 aaKnown RBP9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 ATP2C2O75185 946 aa9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 TPM4P67936 248 aa9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 KRT24Q2M2I5 525 aa9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 DNAJC21Q5F1R6 531 aaKnown RBP9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 GPT2Q8TD30 523 aa9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 DISP3Q9P2K9 1392 aa9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 ZKSCAN1P17029 563 aaPredicted RBP9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 CAMTA1Q9Y6Y1 1673 aa9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 FAM83GA6ND36 823 aa9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 ZNF165P49910 485 aa9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 GYS2P54840 703 aa9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms