RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 HMGB2P26583 209 aaKnown RBP21.5■■□□□ 1.03
SCLT1-205ENST00000503401 GIGYF1O75420 1035 aaPredicted RBP21.49■■□□□ 1.03
SCLT1-205ENST00000503401 STARD3NLO95772 234 aa21.49■■□□□ 1.03
SCLT1-205ENST00000503401 GNAI1P63096 354 aa21.49■■□□□ 1.03
SCLT1-205ENST00000503401 RC3H1Q5TC82 1133 aaKnown RBP21.49■■□□□ 1.03
SCLT1-205ENST00000503401 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.48■■□□□ 1.03
SCLT1-205ENST00000503401 MSH5O43196 834 aa21.48■■□□□ 1.03
SCLT1-205ENST00000503401 COL23A1Q86Y22 540 aaPredicted RBP21.48■■□□□ 1.03
SCLT1-205ENST00000503401 CCDC87Q9NVE4 849 aa21.48■■□□□ 1.03
SCLT1-205ENST00000503401 ZBTB1Q9Y2K1 713 aa21.48■■□□□ 1.03
SCLT1-205ENST00000503401 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
SCLT1-205ENST00000503401 TSR2Q969E8 191 aaKnown RBP21.47■■□□□ 1.03
SCLT1-205ENST00000503401 TEX13AQ9BXU3 409 aaPredicted RBP21.47■■□□□ 1.03
SCLT1-205ENST00000503401 RTCBQ9Y3I0 505 aaKnown RBP21.47■■□□□ 1.03
SCLT1-205ENST00000503401 A1BGP04217 495 aa21.47■■□□□ 1.03
SCLT1-205ENST00000503401 PIP4K2AP48426 406 aaPredicted RBP21.47■■□□□ 1.03
SCLT1-205ENST00000503401 RPS6KA4O75676 772 aa21.46■■□□□ 1.03
SCLT1-205ENST00000503401 ZBTB7AO95365 584 aa21.46■■□□□ 1.03
SCLT1-205ENST00000503401 CANXP27824 592 aaKnown RBP21.46■■□□□ 1.03
SCLT1-205ENST00000503401 WDR63Q8IWG1 891 aa21.46■■□□□ 1.03
SCLT1-205ENST00000503401 SPINK5Q9NQ38 1064 aaPredicted RBP21.46■■□□□ 1.03
SCLT1-205ENST00000503401 SSFA2P28290 1259 aa21.45■■□□□ 1.02
SCLT1-205ENST00000503401 NGEFQ8N5V2 710 aa21.45■■□□□ 1.02
SCLT1-205ENST00000503401 ZNF521Q96K83 1311 aa21.45■■□□□ 1.02
SCLT1-205ENST00000503401 C4AP0C0L4 1744 aa21.44■■□□□ 1.02
SCLT1-205ENST00000503401 IL16Q14005 1332 aa21.43■■□□□ 1.02
SCLT1-205ENST00000503401 TRAPPC3LQ5T215 181 aa21.43■■□□□ 1.02
SCLT1-205ENST00000503401 ARHGEF1Q92888 912 aaKnown RBP21.43■■□□□ 1.02
SCLT1-205ENST00000503401 ZNF330Q9Y3S2 320 aaPredicted RBP21.43■■□□□ 1.02
SCLT1-205ENST00000503401 SOS1Q07889 1333 aaPredicted RBP21.43■■□□□ 1.02
SCLT1-205ENST00000503401 ELL2O00472 640 aaPredicted RBP21.42■■□□□ 1.02
SCLT1-205ENST00000503401 EIF2S2P20042 333 aaKnown RBP21.42■■□□□ 1.02
SCLT1-205ENST00000503401 FLAD1Q8NFF5 587 aa21.42■■□□□ 1.02
SCLT1-205ENST00000503401 NECTIN2Q92692 538 aa21.42■■□□□ 1.02
SCLT1-205ENST00000503401 ATF5Q9Y2D1 282 aaPredicted RBP21.42■■□□□ 1.02
SCLT1-205ENST00000503401 FANCIQ9NVI1 1328 aa21.4■■□□□ 1.02
SCLT1-205ENST00000503401 NBPF26B4DH59 902 aa21.4■■□□□ 1.02
SCLT1-205ENST00000503401 HNRNPUQ00839 825 aaKnown RBP eCLIP21.4■■□□□ 1.02
SCLT1-205ENST00000503401 NBPF10Q6P3W6 841 aaKnown RBP21.4■■□□□ 1.02
SCLT1-205ENST00000503401 NBPF15Q8N660 670 aa21.4■■□□□ 1.02
SCLT1-205ENST00000503401 C8orf58Q8NAV2 365 aa21.4■■□□□ 1.02
SCLT1-205ENST00000503401 COL15A1P39059 1388 aa21.4■■□□□ 1.02
SCLT1-205ENST00000503401 DUSP27Q5VZP5 1158 aa21.4■■□□□ 1.02
SCLT1-205ENST00000503401 MSL1Q68DK7 614 aa21.4■■□□□ 1.02
SCLT1-205ENST00000503401 ADRA2BP18089 450 aa21.39■■□□□ 1.01
SCLT1-205ENST00000503401 RFC4P35249 363 aa21.39■■□□□ 1.01
SCLT1-205ENST00000503401 EIF5P55010 431 aaKnown RBP21.39■■□□□ 1.01
SCLT1-205ENST00000503401 TSPYL6Q8N831 410 aa21.39■■□□□ 1.01
SCLT1-205ENST00000503401 SRP68Q9UHB9 627 aaKnown RBP21.39■■□□□ 1.01
SCLT1-205ENST00000503401 MTFR1LQ9H019 292 aa21.38■■□□□ 1.01
SCLT1-205ENST00000503401 IL6STP40189 918 aaPredicted RBP21.37■■□□□ 1.01
SCLT1-205ENST00000503401 ANXA1P04083 346 aa21.37■■□□□ 1.01
SCLT1-205ENST00000503401 MYL6BP14649 208 aa21.37■■□□□ 1.01
SCLT1-205ENST00000503401 GOLGA2Q08379 1002 aa21.37■■□□□ 1.01
SCLT1-205ENST00000503401 SLC16A10Q8TF71 515 aa21.37■■□□□ 1.01
SCLT1-205ENST00000503401 CDCA7LQ96GN5 454 aa21.37■■□□□ 1.01
SCLT1-205ENST00000503401 ARXQ96QS3 562 aa21.37■■□□□ 1.01
SCLT1-205ENST00000503401 HDGFL1Q5TGJ6 251 aa21.36■■□□□ 1.01
SCLT1-205ENST00000503401 PROSER3Q2NL68 480 aa21.35■■□□□ 1.01
SCLT1-205ENST00000503401 MYH16Q9H6N6 1097 aa21.35■■□□□ 1.01
SCLT1-205ENST00000503401 SPON1Q9HCB6 807 aa21.35■■□□□ 1.01
SCLT1-205ENST00000503401 TBC1D2BQ9UPU7 963 aa21.35■■□□□ 1.01
SCLT1-205ENST00000503401 USP42Q9H9J4 1324 aaKnown RBP21.34■■□□□ 1.01
SCLT1-205ENST00000503401 HOXB7P09629 217 aa21.34■■□□□ 1.01
SCLT1-205ENST00000503401 EXOSC9Q06265 439 aaKnown RBP21.34■■□□□ 1.01
SCLT1-205ENST00000503401 PDIA6Q15084 440 aa21.33■■□□□ 1.01
SCLT1-205ENST00000503401 USPL1Q5W0Q7 1092 aa21.33■■□□□ 1.01
SCLT1-205ENST00000503401 NPM2Q86SE8 214 aaKnown RBP21.33■■□□□ 1.01
SCLT1-205ENST00000503401 ZPR1O75312 459 aa21.33■■□□□ 1
SCLT1-205ENST00000503401 GYS1P13807 737 aa21.33■■□□□ 1
SCLT1-205ENST00000503401 PTGER2P43116 358 aa21.33■■□□□ 1
SCLT1-205ENST00000503401 CHPF2Q9P2E5 772 aa21.33■■□□□ 1
SCLT1-205ENST00000503401 COL24A1Q17RW2 1714 aa21.32■■□□□ 1
SCLT1-205ENST00000503401 E9PSI1 815 aa21.32■■□□□ 1
SCLT1-205ENST00000503401 SLFN5Q08AF3 891 aa21.32■■□□□ 1
SCLT1-205ENST00000503401 TWISTNBQ3B726 338 aaPredicted RBP21.32■■□□□ 1
SCLT1-205ENST00000503401 NARFQ9UHQ1 456 aa21.32■■□□□ 1
SCLT1-205ENST00000503401 A0A087WZG4 1122 aa21.31■■□□□ 1
SCLT1-205ENST00000503401 FKBP8Q14318 412 aa21.31■■□□□ 1
SCLT1-205ENST00000503401 DZIP3Q86Y13 1208 aaKnown RBP21.31■■□□□ 1
SCLT1-205ENST00000503401 SGIP1Q9BQI5 828 aa21.31■■□□□ 1
SCLT1-205ENST00000503401 LRP5O75197 1615 aa21.31■■□□□ 1
SCLT1-205ENST00000503401 ERBB4Q15303 1308 aa21.31■■□□□ 1
SCLT1-205ENST00000503401 SCN7AQ01118 1682 aa21.3■■□□□ 1
SCLT1-205ENST00000503401 TCERG1O14776 1098 aaKnown RBP21.29■■□□□ 1
SCLT1-205ENST00000503401 LRP10Q7Z4F1 713 aa21.29■■□□□ 1
SCLT1-205ENST00000503401 BCL2L12Q9HB09 334 aa21.29■■□□□ 1
SCLT1-205ENST00000503401 BCORQ6W2J9 1755 aa21.29■■□□□ 1
SCLT1-205ENST00000503401 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
SCLT1-205ENST00000503401 DDX21Q9NR30 783 aaKnown RBP eCLIP21.29■■□□□ 1
SCLT1-205ENST00000503401 CAMTA2O94983 1202 aa21.28■■□□□ 1
SCLT1-205ENST00000503401 POLD1P28340 1107 aa21.27■■□□□ 1
SCLT1-205ENST00000503401 DBF4Q9UBU7 674 aaPredicted RBP21.27■■□□□ 1
SCLT1-205ENST00000503401 VAMP4O75379 141 aa21.26■□□□□ 0.99
SCLT1-205ENST00000503401 MMP10P09238 476 aa21.26■□□□□ 0.99
SCLT1-205ENST00000503401 AIMP1Q12904 312 aaKnown RBP21.26■□□□□ 0.99
SCLT1-205ENST00000503401 NLGN1Q8N2Q7 840 aa21.26■□□□□ 0.99
SCLT1-205ENST00000503401 GOLGB1Q14789 3259 aaKnown RBP21.26■□□□□ 0.99
SCLT1-205ENST00000503401 CCDC30Q5VVM6 783 aa21.26■□□□□ 0.99
SCLT1-205ENST00000503401 COPS6Q7L5N1 327 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms