RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 HOXC9P31274 260 aa22.56■■□□□ 1.2
SCARB2-203ENST00000502908 ANAPC15P60006 121 aa22.56■■□□□ 1.2
SCARB2-203ENST00000502908 NBPF7P0C2Y1 421 aaPredicted RBP22.56■■□□□ 1.2
SCARB2-203ENST00000502908 USP48Q86UV5 1035 aa22.56■■□□□ 1.2
SCARB2-203ENST00000502908 SRGAP3O43295 1099 aa22.55■■□□□ 1.2
SCARB2-203ENST00000502908 TAF7Q15545 349 aaPredicted RBP22.55■■□□□ 1.2
SCARB2-203ENST00000502908 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.55■■□□□ 1.2
SCARB2-203ENST00000502908 PLEKHG5O94827 1062 aa22.54■■□□□ 1.2
SCARB2-203ENST00000502908 INTS4Q96HW7 963 aaKnown RBP22.54■■□□□ 1.2
SCARB2-203ENST00000502908 SRCIN1Q9C0H9 1055 aa22.54■■□□□ 1.2
SCARB2-203ENST00000502908 HSPA4P34932 840 aa22.54■■□□□ 1.2
SCARB2-203ENST00000502908 SPG7Q9UQ90 795 aa22.54■■□□□ 1.2
SCARB2-203ENST00000502908 MAP3K5Q99683 1374 aa22.54■■□□□ 1.2
SCARB2-203ENST00000502908 PIK3C2AO00443 1686 aa22.54■■□□□ 1.2
SCARB2-203ENST00000502908 CWC27Q6UX04 472 aaKnown RBP22.53■■□□□ 1.2
SCARB2-203ENST00000502908 RASEFQ8IZ41 740 aa22.53■■□□□ 1.2
SCARB2-203ENST00000502908 PI4K2BQ8TCG2 481 aa22.53■■□□□ 1.2
SCARB2-203ENST00000502908 RHPN1Q8TCX5 695 aa22.53■■□□□ 1.2
SCARB2-203ENST00000502908 SSH3Q8TE77 659 aa22.53■■□□□ 1.2
SCARB2-203ENST00000502908 ZKSCAN5Q9Y2L8 839 aa22.53■■□□□ 1.2
SCARB2-203ENST00000502908 PLEKHG1Q9ULL1 1385 aa22.53■■□□□ 1.2
SCARB2-203ENST00000502908 VSIG10Q8N0Z9 540 aa22.53■■□□□ 1.2
SCARB2-203ENST00000502908 TSPY26PQ9H489 355 aa22.53■■□□□ 1.2
SCARB2-203ENST00000502908 SETD1BQ9UPS6 1966 aaKnown RBP22.53■■□□□ 1.2
SCARB2-203ENST00000502908 HS1BP3Q53T59 392 aa22.52■■□□□ 1.2
SCARB2-203ENST00000502908 CNPY2Q9Y2B0 182 aa22.52■■□□□ 1.2
SCARB2-203ENST00000502908 SNX14Q9Y5W7 946 aa22.51■■□□□ 1.19
SCARB2-203ENST00000502908 KCNQ3O43525 872 aa22.51■■□□□ 1.19
SCARB2-203ENST00000502908 ABTB2Q8N961 1025 aa22.51■■□□□ 1.19
SCARB2-203ENST00000502908 DDX54Q8TDD1 881 aaKnown RBP22.51■■□□□ 1.19
SCARB2-203ENST00000502908 CHPF2Q9P2E5 772 aa22.51■■□□□ 1.19
SCARB2-203ENST00000502908 RPAP1Q9BWH6 1393 aaPredicted RBP22.51■■□□□ 1.19
SCARB2-203ENST00000502908 LRRC37A3O60309 1634 aa22.5■■□□□ 1.19
SCARB2-203ENST00000502908 ZNF500O60304 480 aaPredicted RBP22.5■■□□□ 1.19
SCARB2-203ENST00000502908 PTMAP06454 111 aaKnown RBP22.5■■□□□ 1.19
SCARB2-203ENST00000502908 AK2P54819 239 aa22.5■■□□□ 1.19
SCARB2-203ENST00000502908 LGR6Q9HBX8 967 aa22.5■■□□□ 1.19
SCARB2-203ENST00000502908 HTATSF1O43719 755 aaKnown RBP22.49■■□□□ 1.19
SCARB2-203ENST00000502908 PI4KAP2A4QPH2 592 aa22.49■■□□□ 1.19
SCARB2-203ENST00000502908 SGSM2O43147 1006 aa22.49■■□□□ 1.19
SCARB2-203ENST00000502908 PI4KAP1Q8N8J0 262 aa22.49■■□□□ 1.19
SCARB2-203ENST00000502908 WDR33Q9C0J8 1336 aaKnown RBP22.49■■□□□ 1.19
SCARB2-203ENST00000502908 EID1Q9Y6B2 187 aa22.48■■□□□ 1.19
SCARB2-203ENST00000502908 RAD50Q92878 1312 aa22.48■■□□□ 1.19
SCARB2-203ENST00000502908 GLIPR1L2Q4G1C9 344 aa22.48■■□□□ 1.19
SCARB2-203ENST00000502908 LARGE1O95461 756 aa22.47■■□□□ 1.19
SCARB2-203ENST00000502908 DIP2AQ14689 1571 aa22.47■■□□□ 1.19
SCARB2-203ENST00000502908 NWD1Q149M9 1564 aa22.47■■□□□ 1.19
SCARB2-203ENST00000502908 ZNF830Q96NB3 372 aaPredicted RBP22.47■■□□□ 1.19
SCARB2-203ENST00000502908 FAM13BQ9NYF5 915 aa22.47■■□□□ 1.19
SCARB2-203ENST00000502908 CCDC39Q9UFE4 941 aa22.47■■□□□ 1.19
SCARB2-203ENST00000502908 OS9Q13438 667 aaPredicted RBP22.47■■□□□ 1.19
SCARB2-203ENST00000502908 POLA2Q14181 598 aa22.47■■□□□ 1.19
SCARB2-203ENST00000502908 RUFY3Q7L099 469 aa22.47■■□□□ 1.19
SCARB2-203ENST00000502908 RBM33Q96EV2 1170 aaKnown RBP22.47■■□□□ 1.19
SCARB2-203ENST00000502908 LSG1Q9H089 658 aaKnown RBP22.47■■□□□ 1.19
SCARB2-203ENST00000502908 FIBPO43427 364 aa22.46■■□□□ 1.19
SCARB2-203ENST00000502908 SYAP1Q96A49 352 aaPredicted RBP22.46■■□□□ 1.19
SCARB2-203ENST00000502908 ARID3AQ99856 593 aa22.46■■□□□ 1.19
SCARB2-203ENST00000502908 CASTP20810 708 aaKnown RBP22.45■■□□□ 1.19
SCARB2-203ENST00000502908 KIF1BPQ96EK5 621 aa22.45■■□□□ 1.19
SCARB2-203ENST00000502908 AOX1Q06278 1338 aa22.45■■□□□ 1.18
SCARB2-203ENST00000502908 UQCRHLA0A096LP55 91 aa22.45■■□□□ 1.18
SCARB2-203ENST00000502908 UQCRHP07919 91 aa22.45■■□□□ 1.18
SCARB2-203ENST00000502908 CNTROBQ8N137 903 aa22.45■■□□□ 1.18
SCARB2-203ENST00000502908 USP25Q9UHP3 1055 aa22.45■■□□□ 1.18
SCARB2-203ENST00000502908 RAB11FIP3O75154 756 aa22.45■■□□□ 1.18
SCARB2-203ENST00000502908 SYT1P21579 422 aa22.45■■□□□ 1.18
SCARB2-203ENST00000502908 TTC14Q96N46 770 aa22.45■■□□□ 1.18
SCARB2-203ENST00000502908 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.44■■□□□ 1.18
SCARB2-203ENST00000502908 DNAAF4Q8WXU2 420 aa22.44■■□□□ 1.18
SCARB2-203ENST00000502908 PA2G4Q9UQ80 394 aaKnown RBP22.44■■□□□ 1.18
SCARB2-203ENST00000502908 CACNA1FO60840 1977 aa22.43■■□□□ 1.18
SCARB2-203ENST00000502908 PTH1RQ03431 593 aa22.43■■□□□ 1.18
SCARB2-203ENST00000502908 ADCK5Q3MIX3 580 aa22.43■■□□□ 1.18
SCARB2-203ENST00000502908 BEND3Q5T5X7 828 aa22.43■■□□□ 1.18
SCARB2-203ENST00000502908 ZSCAN22P10073 491 aaPredicted RBP22.43■■□□□ 1.18
SCARB2-203ENST00000502908 HCLS1P14317 486 aaPredicted RBP22.43■■□□□ 1.18
SCARB2-203ENST00000502908 EIF4A1P60842 406 aaKnown RBP22.43■■□□□ 1.18
SCARB2-203ENST00000502908 CCDC83Q8IWF9 413 aa22.43■■□□□ 1.18
SCARB2-203ENST00000502908 STX6O43752 255 aa22.42■■□□□ 1.18
SCARB2-203ENST00000502908 IL17RAQ96F46 866 aa22.42■■□□□ 1.18
SCARB2-203ENST00000502908 PXDNLA1KZ92 1463 aa22.42■■□□□ 1.18
SCARB2-203ENST00000502908 NBPF6Q5VWK0 638 aa22.42■■□□□ 1.18
SCARB2-203ENST00000502908 NBPF4Q96M43 638 aa22.42■■□□□ 1.18
SCARB2-203ENST00000502908 KCNA6P17658 529 aa22.41■■□□□ 1.18
SCARB2-203ENST00000502908 PRPF40BQ6NWY9 871 aaKnown RBP22.41■■□□□ 1.18
SCARB2-203ENST00000502908 LIMCH1Q9UPQ0 1083 aa22.41■■□□□ 1.18
SCARB2-203ENST00000502908 SMC3Q9UQE7 1217 aa22.41■■□□□ 1.18
SCARB2-203ENST00000502908 KIF13AQ9H1H9 1805 aa22.41■■□□□ 1.18
SCARB2-203ENST00000502908 PLCB2Q00722 1185 aa22.41■■□□□ 1.18
SCARB2-203ENST00000502908 MPRIPQ6WCQ1 1025 aa22.41■■□□□ 1.18
SCARB2-203ENST00000502908 C17orf53Q8N3J3 647 aaPredicted RBP22.41■■□□□ 1.18
SCARB2-203ENST00000502908 DIAPH3Q9NSV4 1193 aa22.41■■□□□ 1.18
SCARB2-203ENST00000502908 COL9A3Q14050 684 aaPredicted RBP22.4■■□□□ 1.18
SCARB2-203ENST00000502908 LRRC59Q96AG4 307 aaKnown RBP22.4■■□□□ 1.18
SCARB2-203ENST00000502908 JAKMIP1Q96N16 626 aaKnown RBP22.4■■□□□ 1.18
SCARB2-203ENST00000502908 N4BP2Q86UW6 1770 aaPredicted RBP22.39■■□□□ 1.18
SCARB2-203ENST00000502908 PHF14O94880 888 aa22.39■■□□□ 1.17
SCARB2-203ENST00000502908 PDCL3Q9H2J4 239 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms