RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 GGT6Q6P531 493 aa6.84□□□□□ -1.31
CMSS1-209ENST00000497345 TMPRSS4Q9NRS4 437 aa6.84□□□□□ -1.31
CMSS1-209ENST00000497345 ZFYVE16Q7Z3T8 1539 aa6.84□□□□□ -1.31
CMSS1-209ENST00000497345 PZPP20742 1482 aa6.84□□□□□ -1.31
CMSS1-209ENST00000497345 NEO1Q92859 1461 aa6.84□□□□□ -1.31
CMSS1-209ENST00000497345 POGZQ7Z3K3 1410 aa6.84□□□□□ -1.32
CMSS1-209ENST00000497345 TONSLQ96HA7 1378 aa6.83□□□□□ -1.32
CMSS1-209ENST00000497345 DUOX2Q9NRD8 1548 aa6.83□□□□□ -1.32
CMSS1-209ENST00000497345 RAB15P59190 212 aa6.83□□□□□ -1.32
CMSS1-209ENST00000497345 AGBL1Q96MI9 1066 aa6.83□□□□□ -1.32
CMSS1-209ENST00000497345 ZNF518AQ6AHZ1 1483 aa6.83□□□□□ -1.32
CMSS1-209ENST00000497345 PLXNC1O60486 1568 aa6.82□□□□□ -1.32
CMSS1-209ENST00000497345 INO80Q9ULG1 1556 aaPredicted RBP6.82□□□□□ -1.32
CMSS1-209ENST00000497345 CLSPNQ9HAW4 1339 aa6.82□□□□□ -1.32
CMSS1-209ENST00000497345 PPRC1Q5VV67 1664 aaKnown RBP6.82□□□□□ -1.32
CMSS1-209ENST00000497345 TEX14Q8IWB6 1497 aa6.82□□□□□ -1.32
CMSS1-209ENST00000497345 ESPNB1AK53 854 aa6.82□□□□□ -1.32
CMSS1-209ENST00000497345 ERVH48-1M5A8F1 160 aa6.82□□□□□ -1.32
CMSS1-209ENST00000497345 RELBQ01201 579 aa6.82□□□□□ -1.32
CMSS1-209ENST00000497345 PTSQ03393 145 aa6.82□□□□□ -1.32
CMSS1-209ENST00000497345 RTEL1-TNFRSF6BF6WH68 1400 aa6.82□□□□□ -1.32
CMSS1-209ENST00000497345 YEATS2Q9ULM3 1422 aa6.82□□□□□ -1.32
CMSS1-209ENST00000497345 KIDINS220Q9ULH0 1771 aa6.82□□□□□ -1.32
CMSS1-209ENST00000497345 CTSOP43234 321 aaPredicted RBP6.81□□□□□ -1.32
CMSS1-209ENST00000497345 BRPF1P55201 1214 aaPredicted RBP6.81□□□□□ -1.32
CMSS1-209ENST00000497345 ZNF326Q5BKZ1 582 aaKnown RBP6.81□□□□□ -1.32
CMSS1-209ENST00000497345 ZNF784Q8NCA9 323 aaPredicted RBP6.81□□□□□ -1.32
CMSS1-209ENST00000497345 GJD4Q96KN9 370 aaPredicted RBP6.81□□□□□ -1.32
CMSS1-209ENST00000497345 ZNF395Q9H8N7 513 aaPredicted RBP6.81□□□□□ -1.32
CMSS1-209ENST00000497345 HECW2Q9P2P5 1572 aa6.81□□□□□ -1.32
CMSS1-209ENST00000497345 DHX29Q7Z478 1369 aaKnown RBP6.81□□□□□ -1.32
CMSS1-209ENST00000497345 ARID4BQ4LE39 1312 aaPredicted RBP6.8□□□□□ -1.32
CMSS1-209ENST00000497345 A2MP01023 1474 aa6.8□□□□□ -1.32
CMSS1-209ENST00000497345 ZBBXA8MT70 800 aa6.8□□□□□ -1.32
CMSS1-209ENST00000497345 LILRA1O75019 489 aa6.8□□□□□ -1.32
CMSS1-209ENST00000497345 ADD1P35611 737 aaKnown RBP6.8□□□□□ -1.32
CMSS1-209ENST00000497345 ERBINQ96RT1 1412 aa6.8□□□□□ -1.32
CMSS1-209ENST00000497345 INSM2Q96T92 566 aaPredicted RBP6.8□□□□□ -1.32
CMSS1-209ENST00000497345 FAM135AQ9P2D6 1515 aa6.8□□□□□ -1.32
CMSS1-209ENST00000497345 KANK1Q14678 1352 aa6.8□□□□□ -1.32
CMSS1-209ENST00000497345 ABCA6Q8N139 1617 aa6.79□□□□□ -1.32
CMSS1-209ENST00000497345 COL17A1Q9UMD9 1497 aaPredicted RBP6.79□□□□□ -1.32
CMSS1-209ENST00000497345 RICTORQ6R327 1708 aa6.79□□□□□ -1.32
CMSS1-209ENST00000497345 SLC35F4A4IF30 521 aa6.79□□□□□ -1.32
CMSS1-209ENST00000497345 RGL3Q3MIN7 710 aa6.79□□□□□ -1.32
CMSS1-209ENST00000497345 SEPT12Q8IYM1 358 aa6.79□□□□□ -1.32
CMSS1-209ENST00000497345 CCDC155Q8N6L0 562 aa6.79□□□□□ -1.32
CMSS1-209ENST00000497345 GPR161Q8N6U8 529 aaKnown RBP6.79□□□□□ -1.32
CMSS1-209ENST00000497345 L3MBTL2Q969R5 705 aa6.79□□□□□ -1.32
CMSS1-209ENST00000497345 HIRIP3Q9BW71 556 aaPredicted RBP6.79□□□□□ -1.32
CMSS1-209ENST00000497345 POLMQ9NP87 494 aaPredicted RBP6.79□□□□□ -1.32
CMSS1-209ENST00000497345 ANKRD30BQ9BXX2 1392 aa6.79□□□□□ -1.32
CMSS1-209ENST00000497345 ACIN1Q9UKV3 1341 aaKnown RBP6.78□□□□□ -1.32
CMSS1-209ENST00000497345 WASHC2CQ9Y4E1 1318 aa6.78□□□□□ -1.32
CMSS1-209ENST00000497345 UNC13BO14795 1591 aa6.78□□□□□ -1.32
CMSS1-209ENST00000497345 KDM5CP41229 1560 aa6.78□□□□□ -1.32
CMSS1-209ENST00000497345 FRMPD1Q5SYB0 1578 aa6.78□□□□□ -1.32
CMSS1-209ENST00000497345 GIGYF1O75420 1035 aaPredicted RBP6.78□□□□□ -1.32
CMSS1-209ENST00000497345 ADH1AP07327 375 aa6.78□□□□□ -1.32
CMSS1-209ENST00000497345 PTGIRP43119 386 aa6.78□□□□□ -1.32
CMSS1-209ENST00000497345 KDF1Q8NAX2 398 aaPredicted RBP6.78□□□□□ -1.32
CMSS1-209ENST00000497345 BANK1Q8NDB2 785 aa6.78□□□□□ -1.32
CMSS1-209ENST00000497345 NANOS1Q8WY41 292 aaKnown RBP6.78□□□□□ -1.32
CMSS1-209ENST00000497345 MLH3Q9UHC1 1453 aa6.78□□□□□ -1.32
CMSS1-209ENST00000497345 DIP2CQ9Y2E4 1556 aa6.78□□□□□ -1.32
CMSS1-209ENST00000497345 PPP1R15AO75807 674 aaPredicted RBP6.77□□□□□ -1.33
CMSS1-209ENST00000497345 FBXO45P0C2W1 286 aa6.77□□□□□ -1.33
CMSS1-209ENST00000497345 RNF217Q8TC41 542 aa6.77□□□□□ -1.33
CMSS1-209ENST00000497345 PCDHB9Q9Y5E1 797 aa6.77□□□□□ -1.33
CMSS1-209ENST00000497345 CFAP65Q6ZU64 1925 aaKnown RBP6.76□□□□□ -1.33
CMSS1-209ENST00000497345 CYLDQ9NQC7 956 aa6.76□□□□□ -1.33
CMSS1-209ENST00000497345 CEP152O94986 1710 aa6.76□□□□□ -1.33
CMSS1-209ENST00000497345 IQGAP3Q86VI3 1631 aa6.76□□□□□ -1.33
CMSS1-209ENST00000497345 KDM5DQ9BY66 1539 aa6.76□□□□□ -1.33
CMSS1-209ENST00000497345 ATP10AO60312 1499 aa6.75□□□□□ -1.33
CMSS1-209ENST00000497345 MCCD1P59942 119 aaPredicted RBP6.75□□□□□ -1.33
CMSS1-209ENST00000497345 KRT76Q01546 638 aa6.75□□□□□ -1.33
CMSS1-209ENST00000497345 CCDC125Q86Z20 511 aa6.75□□□□□ -1.33
CMSS1-209ENST00000497345 ITGA6P23229 1130 aa6.74□□□□□ -1.33
CMSS1-209ENST00000497345 NR1H3Q13133 447 aa6.74□□□□□ -1.33
CMSS1-209ENST00000497345 NBPF8Q3BBV2 869 aa6.74□□□□□ -1.33
CMSS1-209ENST00000497345 FOXD4L5Q5VV16 416 aaPredicted RBP6.74□□□□□ -1.33
CMSS1-209ENST00000497345 VWA5B2Q8N398 1253 aa6.74□□□□□ -1.33
CMSS1-209ENST00000497345 DCAF11Q8TEB1 546 aa6.74□□□□□ -1.33
CMSS1-209ENST00000497345 CNTNAP3BQ96NU0 1288 aa6.74□□□□□ -1.33
CMSS1-209ENST00000497345 COL25A1Q9BXS0 654 aaPredicted RBP6.74□□□□□ -1.33
CMSS1-209ENST00000497345 CNTNAP3Q9BZ76 1288 aa6.74□□□□□ -1.33
CMSS1-209ENST00000497345 ESF1Q9H501 851 aaKnown RBP6.74□□□□□ -1.33
CMSS1-209ENST00000497345 EIF2AK4Q9P2K8 1649 aaKnown RBP6.74□□□□□ -1.33
CMSS1-209ENST00000497345 CCDC144AA2RUR9 1427 aa6.74□□□□□ -1.33
CMSS1-209ENST00000497345 E9PCH4 1651 aa6.74□□□□□ -1.33
CMSS1-209ENST00000497345 RPRD2Q5VT52 1461 aaKnown RBP6.73□□□□□ -1.33
CMSS1-209ENST00000497345 MROH1Q8NDA8 1641 aa6.73□□□□□ -1.33
CMSS1-209ENST00000497345 SOCS7O14512 581 aa6.73□□□□□ -1.33
CMSS1-209ENST00000497345 RNF20Q5VTR2 975 aa6.73□□□□□ -1.33
CMSS1-209ENST00000497345 SV2AQ7L0J3 742 aa6.73□□□□□ -1.33
CMSS1-209ENST00000497345 LYSMD3Q7Z3D4 306 aa6.73□□□□□ -1.33
CMSS1-209ENST00000497345 TIMELESSQ9UNS1 1208 aa6.73□□□□□ -1.33
CMSS1-209ENST00000497345 PLA2R1Q13018 1463 aa6.73□□□□□ -1.33
CMSS1-209ENST00000497345 MAGI2Q86UL8 1455 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms