RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RTCBQ9Y3I0 505 aaKnown RBP25.36■■□□□ 1.65
HDAC4-212ENST00000495497 CICQ96RK0 1608 aaPredicted RBP25.36■■□□□ 1.65
HDAC4-212ENST00000495497 RPS6KA4O75676 772 aa25.35■■□□□ 1.65
HDAC4-212ENST00000495497 STARD3NLO95772 234 aa25.35■■□□□ 1.65
HDAC4-212ENST00000495497 CALD1Q05682 793 aaKnown RBP25.35■■□□□ 1.65
HDAC4-212ENST00000495497 IFT57Q9NWB7 429 aa25.35■■□□□ 1.65
HDAC4-212ENST00000495497 GIGYF1O75420 1035 aaPredicted RBP25.34■■□□□ 1.65
HDAC4-212ENST00000495497 CANXP27824 592 aaKnown RBP25.34■■□□□ 1.65
HDAC4-212ENST00000495497 SSFA2P28290 1259 aa25.34■■□□□ 1.65
HDAC4-212ENST00000495497 GNAI1P63096 354 aa25.34■■□□□ 1.65
HDAC4-212ENST00000495497 KRT24Q2M2I5 525 aa25.34■■□□□ 1.65
HDAC4-212ENST00000495497 MYH14Q7Z406 1995 aaKnown RBP25.34■■□□□ 1.65
HDAC4-212ENST00000495497 CASZ1Q86V15 1759 aa25.33■■□□□ 1.65
HDAC4-212ENST00000495497 A1BGP04217 495 aa25.33■■□□□ 1.65
HDAC4-212ENST00000495497 PIP4K2AP48426 406 aaPredicted RBP25.33■■□□□ 1.65
HDAC4-212ENST00000495497 ATF5Q9Y2D1 282 aaPredicted RBP25.33■■□□□ 1.65
HDAC4-212ENST00000495497 TRAPPC3LQ5T215 181 aa25.32■■□□□ 1.64
HDAC4-212ENST00000495497 FLAD1Q8NFF5 587 aa25.32■■□□□ 1.64
HDAC4-212ENST00000495497 UBR3Q6ZT12 1888 aa25.32■■□□□ 1.64
HDAC4-212ENST00000495497 ARHGEF1Q92888 912 aaKnown RBP25.31■■□□□ 1.64
HDAC4-212ENST00000495497 QSER1Q2KHR3 1735 aa25.3■■□□□ 1.64
HDAC4-212ENST00000495497 TSR2Q969E8 191 aaKnown RBP25.3■■□□□ 1.64
HDAC4-212ENST00000495497 WDR63Q8IWG1 891 aa25.29■■□□□ 1.64
HDAC4-212ENST00000495497 SOS1Q07889 1333 aaPredicted RBP25.29■■□□□ 1.64
HDAC4-212ENST00000495497 MSL1Q68DK7 614 aa25.28■■□□□ 1.64
HDAC4-212ENST00000495497 NGEFQ8N5V2 710 aa25.28■■□□□ 1.64
HDAC4-212ENST00000495497 SPINK5Q9NQ38 1064 aaPredicted RBP25.28■■□□□ 1.64
HDAC4-212ENST00000495497 ZNF330Q9Y3S2 320 aaPredicted RBP25.28■■□□□ 1.64
HDAC4-212ENST00000495497 EIF2S2P20042 333 aaKnown RBP25.27■■□□□ 1.64
HDAC4-212ENST00000495497 MTFR1LQ9H019 292 aa25.27■■□□□ 1.64
HDAC4-212ENST00000495497 IL16Q14005 1332 aa25.27■■□□□ 1.64
HDAC4-212ENST00000495497 SLC16A10Q8TF71 515 aa25.26■■□□□ 1.63
HDAC4-212ENST00000495497 NECTIN2Q92692 538 aa25.26■■□□□ 1.63
HDAC4-212ENST00000495497 SPON1Q9HCB6 807 aa25.26■■□□□ 1.63
HDAC4-212ENST00000495497 SRP68Q9UHB9 627 aaKnown RBP25.26■■□□□ 1.63
HDAC4-212ENST00000495497 ZNF521Q96K83 1311 aa25.26■■□□□ 1.63
HDAC4-212ENST00000495497 NBPF26B4DH59 902 aa25.25■■□□□ 1.63
HDAC4-212ENST00000495497 ADRA2BP18089 450 aa25.25■■□□□ 1.63
HDAC4-212ENST00000495497 RFC4P35249 363 aa25.25■■□□□ 1.63
HDAC4-212ENST00000495497 EIF5P55010 431 aaKnown RBP25.25■■□□□ 1.63
HDAC4-212ENST00000495497 NBPF10Q6P3W6 841 aaKnown RBP25.25■■□□□ 1.63
HDAC4-212ENST00000495497 NBPF15Q8N660 670 aa25.25■■□□□ 1.63
HDAC4-212ENST00000495497 COL15A1P39059 1388 aa25.24■■□□□ 1.63
HDAC4-212ENST00000495497 ELL2O00472 640 aaPredicted RBP25.24■■□□□ 1.63
HDAC4-212ENST00000495497 IL6STP40189 918 aaPredicted RBP25.23■■□□□ 1.63
HDAC4-212ENST00000495497 DUSP27Q5VZP5 1158 aa25.23■■□□□ 1.63
HDAC4-212ENST00000495497 C8orf58Q8NAV2 365 aa25.23■■□□□ 1.63
HDAC4-212ENST00000495497 PTGER2P43116 358 aa25.22■■□□□ 1.63
HDAC4-212ENST00000495497 FANCIQ9NVI1 1328 aa25.21■■□□□ 1.63
HDAC4-212ENST00000495497 ARXQ96QS3 562 aa25.21■■□□□ 1.63
HDAC4-212ENST00000495497 USP42Q9H9J4 1324 aaKnown RBP25.2■■□□□ 1.62
HDAC4-212ENST00000495497 GYS1P13807 737 aa25.2■■□□□ 1.62
HDAC4-212ENST00000495497 MYL6BP14649 208 aa25.2■■□□□ 1.62
HDAC4-212ENST00000495497 USPL1Q5W0Q7 1092 aa25.2■■□□□ 1.62
HDAC4-212ENST00000495497 TSPYL6Q8N831 410 aa25.2■■□□□ 1.62
HDAC4-212ENST00000495497 SGIP1Q9BQI5 828 aa25.2■■□□□ 1.62
HDAC4-212ENST00000495497 TBC1D2BQ9UPU7 963 aa25.2■■□□□ 1.62
HDAC4-212ENST00000495497 LAMB4A4D0S4 1761 aa25.19■■□□□ 1.62
HDAC4-212ENST00000495497 ANXA1P04083 346 aa25.19■■□□□ 1.62
HDAC4-212ENST00000495497 ZPR1O75312 459 aa25.18■■□□□ 1.62
HDAC4-212ENST00000495497 PDIA6Q15084 440 aa25.18■■□□□ 1.62
HDAC4-212ENST00000495497 PROSER3Q2NL68 480 aa25.18■■□□□ 1.62
HDAC4-212ENST00000495497 HDGFL1Q5TGJ6 251 aa25.18■■□□□ 1.62
HDAC4-212ENST00000495497 NARFQ9UHQ1 456 aa25.18■■□□□ 1.62
HDAC4-212ENST00000495497 A0A087WZG4 1122 aa25.17■■□□□ 1.62
HDAC4-212ENST00000495497 HOXB7P09629 217 aa25.17■■□□□ 1.62
HDAC4-212ENST00000495497 HNRNPUQ00839 825 aaKnown RBP eCLIP25.17■■□□□ 1.62
HDAC4-212ENST00000495497 GOLGA2Q08379 1002 aa25.17■■□□□ 1.62
HDAC4-212ENST00000495497 NPM2Q86SE8 214 aaKnown RBP25.17■■□□□ 1.62
HDAC4-212ENST00000495497 C4AP0C0L4 1744 aa25.17■■□□□ 1.62
HDAC4-212ENST00000495497 SRCAPQ6ZRS2 3230 aa25.16■■□□□ 1.62
HDAC4-212ENST00000495497 FKBP8Q14318 412 aa25.16■■□□□ 1.62
HDAC4-212ENST00000495497 CDCA7LQ96GN5 454 aa25.16■■□□□ 1.62
HDAC4-212ENST00000495497 BCL2L12Q9HB09 334 aa25.16■■□□□ 1.62
HDAC4-212ENST00000495497 POLD1P28340 1107 aa25.15■■□□□ 1.62
HDAC4-212ENST00000495497 EXOSC9Q06265 439 aaKnown RBP25.15■■□□□ 1.62
HDAC4-212ENST00000495497 DZIP3Q86Y13 1208 aaKnown RBP25.15■■□□□ 1.62
HDAC4-212ENST00000495497 MYH16Q9H6N6 1097 aa25.15■■□□□ 1.62
HDAC4-212ENST00000495497 CHPF2Q9P2E5 772 aa25.14■■□□□ 1.62
HDAC4-212ENST00000495497 ERBB4Q15303 1308 aa25.13■■□□□ 1.61
HDAC4-212ENST00000495497 LRP5O75197 1615 aa25.13■■□□□ 1.61
HDAC4-212ENST00000495497 LRP10Q7Z4F1 713 aa25.13■■□□□ 1.61
HDAC4-212ENST00000495497 NLGN1Q8N2Q7 840 aa25.13■■□□□ 1.61
HDAC4-212ENST00000495497 PPP1R1BQ9UD71 204 aaPredicted RBP25.13■■□□□ 1.61
HDAC4-212ENST00000495497 CAMTA2O94983 1202 aa25.12■■□□□ 1.61
HDAC4-212ENST00000495497 TWISTNBQ3B726 338 aaPredicted RBP25.12■■□□□ 1.61
HDAC4-212ENST00000495497 TTLL7Q6ZT98 887 aa25.12■■□□□ 1.61
HDAC4-212ENST00000495497 MMP10P09238 476 aa25.11■■□□□ 1.61
HDAC4-212ENST00000495497 SLFN5Q08AF3 891 aa25.11■■□□□ 1.61
HDAC4-212ENST00000495497 E9PSI1 815 aa25.1■■□□□ 1.61
HDAC4-212ENST00000495497 TCERG1O14776 1098 aaKnown RBP25.1■■□□□ 1.61
HDAC4-212ENST00000495497 DDX21Q9NR30 783 aaKnown RBP eCLIP25.1■■□□□ 1.61
HDAC4-212ENST00000495497 AIMP1Q12904 312 aaKnown RBP25.09■■□□□ 1.61
HDAC4-212ENST00000495497 COL24A1Q17RW2 1714 aa25.09■■□□□ 1.61
HDAC4-212ENST00000495497 BICDL1Q6ZP65 573 aa25.08■■□□□ 1.61
HDAC4-212ENST00000495497 XAGE3Q8WTP9 111 aa25.08■■□□□ 1.61
HDAC4-212ENST00000495497 DBF4Q9UBU7 674 aaPredicted RBP25.08■■□□□ 1.61
HDAC4-212ENST00000495497 VAMP4O75379 141 aa25.07■■□□□ 1.6
HDAC4-212ENST00000495497 TM4SF1P30408 202 aa25.07■■□□□ 1.6
HDAC4-212ENST00000495497 HLFQ16534 295 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms