RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 MRPL50Q8N5N7 158 aaKnown RBP24.84■■□□□ 1.57
USP39-218ENST00000493829 ZNF831Q5JPB2 1677 aa24.83■■□□□ 1.57
USP39-218ENST00000493829 PLIN1O60240 522 aa24.83■■□□□ 1.57
USP39-218ENST00000493829 SLC4A2P04920 1241 aa24.83■■□□□ 1.57
USP39-218ENST00000493829 PROSER3Q2NL68 480 aa24.83■■□□□ 1.57
USP39-218ENST00000493829 MYL6BP14649 208 aa24.82■■□□□ 1.56
USP39-218ENST00000493829 CANXP27824 592 aaKnown RBP24.82■■□□□ 1.56
USP39-218ENST00000493829 A1BGP04217 495 aa24.81■■□□□ 1.56
USP39-218ENST00000493829 STARD3NLO95772 234 aa24.81■■□□□ 1.56
USP39-218ENST00000493829 CYP19A1P11511 503 aaPredicted RBP24.8■■□□□ 1.56
USP39-218ENST00000493829 RRP1P56182 461 aaKnown RBP24.8■■□□□ 1.56
USP39-218ENST00000493829 LINC00116Q8NCU8 138 aa24.8■■□□□ 1.56
USP39-218ENST00000493829 TEX13AQ9BXU3 409 aaPredicted RBP24.8■■□□□ 1.56
USP39-218ENST00000493829 DBF4Q9UBU7 674 aaPredicted RBP24.8■■□□□ 1.56
USP39-218ENST00000493829 TAF1LQ8IZX4 1826 aa24.79■■□□□ 1.56
USP39-218ENST00000493829 G2E3Q7L622 706 aa24.79■■□□□ 1.56
USP39-218ENST00000493829 NOB1Q9ULX3 412 aaKnown RBP24.79■■□□□ 1.56
USP39-218ENST00000493829 ZNF330Q9Y3S2 320 aaPredicted RBP24.79■■□□□ 1.56
USP39-218ENST00000493829 PHAXQ9H814 394 aaKnown RBP24.78■■□□□ 1.56
USP39-218ENST00000493829 KIF16BQ96L93 1317 aa24.78■■□□□ 1.56
USP39-218ENST00000493829 PDIA6Q15084 440 aa24.78■■□□□ 1.56
USP39-218ENST00000493829 CHMP4AQ9BY43 222 aa24.78■■□□□ 1.56
USP39-218ENST00000493829 NBPF26B4DH59 902 aa24.77■■□□□ 1.56
USP39-218ENST00000493829 CRKLP46109 303 aaKnown RBP24.77■■□□□ 1.56
USP39-218ENST00000493829 SF3B2Q13435 895 aaKnown RBP24.77■■□□□ 1.56
USP39-218ENST00000493829 NBPF14Q5TI25 921 aa24.77■■□□□ 1.56
USP39-218ENST00000493829 NBPF10Q6P3W6 841 aaKnown RBP24.77■■□□□ 1.56
USP39-218ENST00000493829 NBPF15Q8N660 670 aa24.77■■□□□ 1.56
USP39-218ENST00000493829 DDX21Q9NR30 783 aaKnown RBP eCLIP24.77■■□□□ 1.56
USP39-218ENST00000493829 LRRC4BQ9NT99 713 aa24.77■■□□□ 1.56
USP39-218ENST00000493829 ZBTB1Q9Y2K1 713 aa24.77■■□□□ 1.56
USP39-218ENST00000493829 RGPD3A6NKT7 1758 aaPredicted RBP24.76■■□□□ 1.55
USP39-218ENST00000493829 RGPD4Q7Z3J3 1758 aa24.76■■□□□ 1.55
USP39-218ENST00000493829 TXNRD1Q16881 649 aa24.76■■□□□ 1.55
USP39-218ENST00000493829 TNNQ9UQP3 1299 aa24.76■■□□□ 1.55
USP39-218ENST00000493829 RREB1Q92766 1687 aa24.76■■□□□ 1.55
USP39-218ENST00000493829 IRX6P78412 446 aaPredicted RBP24.75■■□□□ 1.55
USP39-218ENST00000493829 C4BP0C0L5 1744 aa24.75■■□□□ 1.55
USP39-218ENST00000493829 AIMP1Q12904 312 aaKnown RBP24.75■■□□□ 1.55
USP39-218ENST00000493829 CCDC87Q9NVE4 849 aa24.75■■□□□ 1.55
USP39-218ENST00000493829 ERBB4Q15303 1308 aa24.74■■□□□ 1.55
USP39-218ENST00000493829 PLSCR1O15162 318 aa24.74■■□□□ 1.55
USP39-218ENST00000493829 EN1Q05925 392 aaPredicted RBP24.74■■□□□ 1.55
USP39-218ENST00000493829 FLIIQ13045 1269 aa24.74■■□□□ 1.55
USP39-218ENST00000493829 CACNA1FO60840 1977 aa24.74■■□□□ 1.55
USP39-218ENST00000493829 MYH14Q7Z406 1995 aaKnown RBP24.74■■□□□ 1.55
USP39-218ENST00000493829 PROM2Q8N271 834 aa24.73■■□□□ 1.55
USP39-218ENST00000493829 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.73■■□□□ 1.55
USP39-218ENST00000493829 CLUAP1Q96AJ1 413 aa24.73■■□□□ 1.55
USP39-218ENST00000493829 HYPKQ9NX55 129 aa24.73■■□□□ 1.55
USP39-218ENST00000493829 FKBP5Q13451 457 aaPredicted RBP24.72■■□□□ 1.55
USP39-218ENST00000493829 SLC27A3Q5K4L6 730 aa24.72■■□□□ 1.55
USP39-218ENST00000493829 ZKSCAN2Q63HK3 967 aa24.72■■□□□ 1.55
USP39-218ENST00000493829 INTS5Q6P9B9 1019 aaKnown RBP24.72■■□□□ 1.55
USP39-218ENST00000493829 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
USP39-218ENST00000493829 BRPF1P55201 1214 aaPredicted RBP24.72■■□□□ 1.55
USP39-218ENST00000493829 DEFB132Q7Z7B7 95 aa24.72■■□□□ 1.55
USP39-218ENST00000493829 XAGE3Q8WTP9 111 aa24.72■■□□□ 1.55
USP39-218ENST00000493829 EZH2Q15910 746 aaKnown RBP24.71■■□□□ 1.55
USP39-218ENST00000493829 C20orf194Q5TEA3 1177 aa24.71■■□□□ 1.55
USP39-218ENST00000493829 LRP10Q7Z4F1 713 aa24.71■■□□□ 1.55
USP39-218ENST00000493829 TRIM27P14373 513 aa24.7■■□□□ 1.54
USP39-218ENST00000493829 BAG6P46379 1132 aa24.7■■□□□ 1.54
USP39-218ENST00000493829 CNTNAP4Q9C0A0 1308 aa24.7■■□□□ 1.54
USP39-218ENST00000493829 IPO8O15397 1037 aaKnown RBP24.69■■□□□ 1.54
USP39-218ENST00000493829 ATF7IPQ6VMQ6 1270 aa24.69■■□□□ 1.54
USP39-218ENST00000493829 SMIM5Q71RC9 77 aa24.69■■□□□ 1.54
USP39-218ENST00000493829 COPS6Q7L5N1 327 aa24.69■■□□□ 1.54
USP39-218ENST00000493829 ARXQ96QS3 562 aa24.69■■□□□ 1.54
USP39-218ENST00000493829 PTPRCP08575 1304 aa24.69■■□□□ 1.54
USP39-218ENST00000493829 GNPATO15228 680 aa24.69■■□□□ 1.54
USP39-218ENST00000493829 F6X3S4 739 aa24.68■■□□□ 1.54
USP39-218ENST00000493829 FTSJ3Q8IY81 847 aaKnown RBP24.68■■□□□ 1.54
USP39-218ENST00000493829 PANK1Q8TE04 598 aa24.68■■□□□ 1.54
USP39-218ENST00000493829 AK7Q96M32 723 aa24.68■■□□□ 1.54
USP39-218ENST00000493829 TTLL7Q6ZT98 887 aa24.67■■□□□ 1.54
USP39-218ENST00000493829 ILDR2Q71H61 639 aa24.67■■□□□ 1.54
USP39-218ENST00000493829 CAMKK2Q96RR4 588 aa24.67■■□□□ 1.54
USP39-218ENST00000493829 RLBP1P12271 317 aa24.66■■□□□ 1.54
USP39-218ENST00000493829 API5Q9BZZ5 524 aaKnown RBP24.66■■□□□ 1.54
USP39-218ENST00000493829 ARFGEF2Q9Y6D5 1785 aa24.65■■□□□ 1.54
USP39-218ENST00000493829 NUP188Q5SRE5 1749 aa24.65■■□□□ 1.54
USP39-218ENST00000493829 ADCY9O60503 1353 aa24.65■■□□□ 1.54
USP39-218ENST00000493829 COL15A1P39059 1388 aa24.65■■□□□ 1.54
USP39-218ENST00000493829 PHF14O94880 888 aa24.65■■□□□ 1.54
USP39-218ENST00000493829 IL6STP40189 918 aaPredicted RBP24.65■■□□□ 1.54
USP39-218ENST00000493829 NPM2Q86SE8 214 aaKnown RBP24.65■■□□□ 1.54
USP39-218ENST00000493829 SLC4A10Q6U841 1118 aa24.64■■□□□ 1.53
USP39-218ENST00000493829 AMIGO3Q86WK7 504 aa24.64■■□□□ 1.53
USP39-218ENST00000493829 DZIP1LQ8IYY4 767 aaKnown RBP24.64■■□□□ 1.53
USP39-218ENST00000493829 ARHGAP45Q92619 1136 aa24.64■■□□□ 1.53
USP39-218ENST00000493829 ZBTB3Q9H5J0 574 aa24.64■■□□□ 1.53
USP39-218ENST00000493829 PI4KAP2A4QPH2 592 aa24.63■■□□□ 1.53
USP39-218ENST00000493829 DDX58O95786 925 aaKnown RBP24.63■■□□□ 1.53
USP39-218ENST00000493829 NEFLP07196 543 aa24.63■■□□□ 1.53
USP39-218ENST00000493829 RC3H1Q5TC82 1133 aaKnown RBP24.63■■□□□ 1.53
USP39-218ENST00000493829 PI4KAP1Q8N8J0 262 aa24.63■■□□□ 1.53
USP39-218ENST00000493829 EIF5P55010 431 aaKnown RBP24.62■■□□□ 1.53
USP39-218ENST00000493829 KIF6Q6ZMV9 814 aa24.62■■□□□ 1.53
USP39-218ENST00000493829 RIC3Q7Z5B4 369 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms