RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 APBA3O96018 575 aa16.02■□□□□ 0.16
SNX17-208ENST00000493711 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
SNX17-208ENST00000493711 DOT1LQ8TEK3 1739 aa16.02■□□□□ 0.15
SNX17-208ENST00000493711 BRWD3Q6RI45 1802 aa16.01■□□□□ 0.15
SNX17-208ENST00000493711 LOC102724428A0A0B4J2F2 783 aa16.01■□□□□ 0.15
SNX17-208ENST00000493711 GIGYF1O75420 1035 aaPredicted RBP16.01■□□□□ 0.15
SNX17-208ENST00000493711 SIK1P57059 783 aa16.01■□□□□ 0.15
SNX17-208ENST00000493711 SLC27A3Q5K4L6 730 aa16.01■□□□□ 0.15
SNX17-208ENST00000493711 STARD3NLO95772 234 aa16■□□□□ 0.15
SNX17-208ENST00000493711 CENPBP07199 599 aaPredicted RBP16■□□□□ 0.15
SNX17-208ENST00000493711 C8orf58Q8NAV2 365 aa16■□□□□ 0.15
SNX17-208ENST00000493711 PRKAR2AP13861 404 aaKnown RBP15.99■□□□□ 0.15
SNX17-208ENST00000493711 BAG6P46379 1132 aa15.99■□□□□ 0.15
SNX17-208ENST00000493711 PTF1AQ7RTS3 328 aa15.99■□□□□ 0.15
SNX17-208ENST00000493711 ERBB4Q15303 1308 aa15.98■□□□□ 0.15
SNX17-208ENST00000493711 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
SNX17-208ENST00000493711 VAMP4O75379 141 aa15.98■□□□□ 0.15
SNX17-208ENST00000493711 ATP6V1AP38606 617 aa15.98■□□□□ 0.15
SNX17-208ENST00000493711 CCDC30Q5VVM6 783 aa15.98■□□□□ 0.15
SNX17-208ENST00000493711 KCPQ6ZWJ8 1503 aa15.98■□□□□ 0.15
SNX17-208ENST00000493711 HDGFL1Q5TGJ6 251 aa15.97■□□□□ 0.15
SNX17-208ENST00000493711 CHADLQ6NUI6 762 aa15.97■□□□□ 0.15
SNX17-208ENST00000493711 CCNL1Q9UK58 526 aaPredicted RBP15.97■□□□□ 0.15
SNX17-208ENST00000493711 PAPPAQ13219 1627 aa15.97■□□□□ 0.15
SNX17-208ENST00000493711 ELL2O00472 640 aaPredicted RBP15.96■□□□□ 0.15
SNX17-208ENST00000493711 ALDH1L2Q3SY69 923 aa15.96■□□□□ 0.15
SNX17-208ENST00000493711 TSPYL6Q8N831 410 aa15.96■□□□□ 0.15
SNX17-208ENST00000493711 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
SNX17-208ENST00000493711 KDM3BQ7LBC6 1761 aa15.95■□□□□ 0.14
SNX17-208ENST00000493711 PRR29P0C7W0 189 aa15.95■□□□□ 0.14
SNX17-208ENST00000493711 KRT24Q2M2I5 525 aa15.95■□□□□ 0.14
SNX17-208ENST00000493711 ITGB4P16144 1822 aa15.94■□□□□ 0.14
SNX17-208ENST00000493711 TXNRD1Q16881 649 aa15.94■□□□□ 0.14
SNX17-208ENST00000493711 RC3H1Q5TC82 1133 aaKnown RBP15.94■□□□□ 0.14
SNX17-208ENST00000493711 DNAJC10Q8IXB1 793 aa15.94■□□□□ 0.14
SNX17-208ENST00000493711 SLC4A9Q96Q91 983 aa15.94■□□□□ 0.14
SNX17-208ENST00000493711 DBF4Q9UBU7 674 aaPredicted RBP15.94■□□□□ 0.14
SNX17-208ENST00000493711 CYP19A1P11511 503 aaPredicted RBP15.93■□□□□ 0.14
SNX17-208ENST00000493711 EIF2S2P20042 333 aaKnown RBP15.93■□□□□ 0.14
SNX17-208ENST00000493711 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
SNX17-208ENST00000493711 USP16Q9Y5T5 823 aa15.93■□□□□ 0.14
SNX17-208ENST00000493711 RARSP54136 660 aaKnown RBP15.92■□□□□ 0.14
SNX17-208ENST00000493711 BRPF1P55201 1214 aaPredicted RBP15.92■□□□□ 0.14
SNX17-208ENST00000493711 ITPK1Q13572 414 aa15.92■□□□□ 0.14
SNX17-208ENST00000493711 NPM2Q86SE8 214 aaKnown RBP15.92■□□□□ 0.14
SNX17-208ENST00000493711 CAMKK2Q96RR4 588 aa15.92■□□□□ 0.14
SNX17-208ENST00000493711 DDX21Q9NR30 783 aaKnown RBP eCLIP15.92■□□□□ 0.14
SNX17-208ENST00000493711 CCDC87Q9NVE4 849 aa15.92■□□□□ 0.14
SNX17-208ENST00000493711 HYPKQ9NX55 129 aa15.92■□□□□ 0.14
SNX17-208ENST00000493711 CNTNAP4Q9C0A0 1308 aa15.92■□□□□ 0.14
SNX17-208ENST00000493711 SBF2Q86WG5 1849 aa15.91■□□□□ 0.14
SNX17-208ENST00000493711 UBR2Q8IWV8 1755 aa15.91■□□□□ 0.14
SNX17-208ENST00000493711 YY1P25490 414 aa15.91■□□□□ 0.14
SNX17-208ENST00000493711 EN1Q05925 392 aaPredicted RBP15.91■□□□□ 0.14
SNX17-208ENST00000493711 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
SNX17-208ENST00000493711 ZNF831Q5JPB2 1677 aa15.91■□□□□ 0.14
SNX17-208ENST00000493711 BTAF1O14981 1849 aa15.91■□□□□ 0.14
SNX17-208ENST00000493711 PRAMEF22A3QJZ6 481 aa15.9■□□□□ 0.14
SNX17-208ENST00000493711 CRKLP46109 303 aaKnown RBP15.9■□□□□ 0.14
SNX17-208ENST00000493711 SMC4Q9NTJ3 1288 aa15.9■□□□□ 0.14
SNX17-208ENST00000493711 KIF16BQ96L93 1317 aa15.9■□□□□ 0.14
SNX17-208ENST00000493711 IPO8O15397 1037 aaKnown RBP15.89■□□□□ 0.13
SNX17-208ENST00000493711 IL6STP40189 918 aaPredicted RBP15.89■□□□□ 0.13
SNX17-208ENST00000493711 PROM2Q8N271 834 aa15.89■□□□□ 0.13
SNX17-208ENST00000493711 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.89■□□□□ 0.13
SNX17-208ENST00000493711 LINC00116Q8NCU8 138 aa15.89■□□□□ 0.13
SNX17-208ENST00000493711 SSH1Q8WYL5 1049 aa15.89■□□□□ 0.13
SNX17-208ENST00000493711 CICQ96RK0 1608 aaPredicted RBP15.89■□□□□ 0.13
SNX17-208ENST00000493711 A0A087WZG4 1122 aa15.88■□□□□ 0.13
SNX17-208ENST00000493711 NECTIN2Q92692 538 aa15.88■□□□□ 0.13
SNX17-208ENST00000493711 AK7Q96M32 723 aa15.88■□□□□ 0.13
SNX17-208ENST00000493711 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
SNX17-208ENST00000493711 CHPF2Q9P2E5 772 aa15.88■□□□□ 0.13
SNX17-208ENST00000493711 VIRMAQ69YN4 1812 aaKnown RBP15.88■□□□□ 0.13
SNX17-208ENST00000493711 RPS6KA4O75676 772 aa15.87■□□□□ 0.13
SNX17-208ENST00000493711 A1BGP04217 495 aa15.87■□□□□ 0.13
SNX17-208ENST00000493711 PDIA6Q15084 440 aa15.87■□□□□ 0.13
SNX17-208ENST00000493711 EZH2Q15910 746 aaKnown RBP15.87■□□□□ 0.13
SNX17-208ENST00000493711 INTS5Q6P9B9 1019 aaKnown RBP15.87■□□□□ 0.13
SNX17-208ENST00000493711 MRPL50Q8N5N7 158 aaKnown RBP15.87■□□□□ 0.13
SNX17-208ENST00000493711 RGPD3A6NKT7 1758 aaPredicted RBP15.87■□□□□ 0.13
SNX17-208ENST00000493711 RGPD4Q7Z3J3 1758 aa15.87■□□□□ 0.13
SNX17-208ENST00000493711 TNS1Q9HBL0 1735 aaKnown RBP15.86■□□□□ 0.13
SNX17-208ENST00000493711 DDX58O95786 925 aaKnown RBP15.86■□□□□ 0.13
SNX17-208ENST00000493711 FLAD1Q8NFF5 587 aa15.86■□□□□ 0.13
SNX17-208ENST00000493711 ARHGAP45Q92619 1136 aa15.86■□□□□ 0.13
SNX17-208ENST00000493711 RTCBQ9Y3I0 505 aaKnown RBP15.86■□□□□ 0.13
SNX17-208ENST00000493711 PTPRCP08575 1304 aa15.86■□□□□ 0.13
SNX17-208ENST00000493711 NBPF26B4DH59 902 aa15.85■□□□□ 0.13
SNX17-208ENST00000493711 RGL2O15211 777 aa15.85■□□□□ 0.13
SNX17-208ENST00000493711 MS4A1P11836 297 aa15.85■□□□□ 0.13
SNX17-208ENST00000493711 CANXP27824 592 aaKnown RBP15.85■□□□□ 0.13
SNX17-208ENST00000493711 KCNQ4P56696 695 aa15.85■□□□□ 0.13
SNX17-208ENST00000493711 NBPF14Q5TI25 921 aa15.85■□□□□ 0.13
SNX17-208ENST00000493711 NBPF10Q6P3W6 841 aaKnown RBP15.85■□□□□ 0.13
SNX17-208ENST00000493711 NBPF15Q8N660 670 aa15.85■□□□□ 0.13
SNX17-208ENST00000493711 ZBTB1Q9Y2K1 713 aa15.85■□□□□ 0.13
SNX17-208ENST00000493711 C5P01031 1676 aa15.84■□□□□ 0.13
SNX17-208ENST00000493711 GNPATO15228 680 aa15.84■□□□□ 0.13
SNX17-208ENST00000493711 MYL6BP14649 208 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms