RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
TSC1-207ENST00000493467 CRISPLD2Q9H0B8 497 aa11.93□□□□□ -0.5
TSC1-207ENST00000493467 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
TSC1-207ENST00000493467 MARF1Q9Y4F3 1742 aaKnown RBP11.93□□□□□ -0.5
TSC1-207ENST00000493467 HMMRO75330 724 aa11.92□□□□□ -0.5
TSC1-207ENST00000493467 HSP90AB2PQ58FF8 381 aa11.92□□□□□ -0.5
TSC1-207ENST00000493467 CASC1Q6TDU7 716 aa11.92□□□□□ -0.5
TSC1-207ENST00000493467 MEIS3Q99687 375 aa11.92□□□□□ -0.5
TSC1-207ENST00000493467 PXDNLA1KZ92 1463 aa11.92□□□□□ -0.5
TSC1-207ENST00000493467 MAP3K19Q56UN5 1328 aa11.92□□□□□ -0.5
TSC1-207ENST00000493467 GOLGA6L22H0YM25 854 aa11.92□□□□□ -0.5
TSC1-207ENST00000493467 HSP90B1P14625 803 aaKnown RBP11.92□□□□□ -0.5
TSC1-207ENST00000493467 SDSP20132 328 aa11.92□□□□□ -0.5
TSC1-207ENST00000493467 CCT4P50991 539 aaKnown RBP11.92□□□□□ -0.5
TSC1-207ENST00000493467 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
TSC1-207ENST00000493467 IGSF1Q8N6C5 1336 aa11.92□□□□□ -0.5
TSC1-207ENST00000493467 CACNA1FO60840 1977 aa11.92□□□□□ -0.5
TSC1-207ENST00000493467 CYP2E1P05181 493 aaPredicted RBP11.91□□□□□ -0.5
TSC1-207ENST00000493467 SSFA2P28290 1259 aa11.91□□□□□ -0.5
TSC1-207ENST00000493467 CLCN1P35523 988 aa11.91□□□□□ -0.5
TSC1-207ENST00000493467 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
TSC1-207ENST00000493467 EFCAB3Q8N7B9 438 aa11.91□□□□□ -0.5
TSC1-207ENST00000493467 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
TSC1-207ENST00000493467 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
TSC1-207ENST00000493467 HTATSF1O43719 755 aaKnown RBP11.91□□□□□ -0.5
TSC1-207ENST00000493467 NUCB2P80303 420 aa11.91□□□□□ -0.5
TSC1-207ENST00000493467 OTUD7AQ8TE49 926 aaPredicted RBP11.91□□□□□ -0.5
TSC1-207ENST00000493467 NWD1Q149M9 1564 aa11.9□□□□□ -0.5
TSC1-207ENST00000493467 BAG4O95429 457 aaKnown RBP11.9□□□□□ -0.5
TSC1-207ENST00000493467 KLHL40Q2TBA0 621 aa11.9□□□□□ -0.5
TSC1-207ENST00000493467 REC8O95072 547 aa11.9□□□□□ -0.51
TSC1-207ENST00000493467 MTHFSDQ2M296 383 aaKnown RBP11.9□□□□□ -0.51
TSC1-207ENST00000493467 CWC22Q9HCG8 908 aaKnown RBP11.9□□□□□ -0.51
TSC1-207ENST00000493467 ANKARQ7Z5J8 1434 aa11.9□□□□□ -0.51
TSC1-207ENST00000493467 SALL3Q9BXA9 1300 aa11.89□□□□□ -0.51
TSC1-207ENST00000493467 RGPD8O14715 1765 aaPredicted RBP11.89□□□□□ -0.51
TSC1-207ENST00000493467 TSPYL4Q9UJ04 414 aa11.89□□□□□ -0.51
TSC1-207ENST00000493467 IRF6O14896 467 aa11.88□□□□□ -0.51
TSC1-207ENST00000493467 ST18O60284 1047 aa11.88□□□□□ -0.51
TSC1-207ENST00000493467 LTKP29376 864 aa11.88□□□□□ -0.51
TSC1-207ENST00000493467 PSEN1P49768 467 aa11.88□□□□□ -0.51
TSC1-207ENST00000493467 RTF1Q92541 710 aaKnown RBP11.88□□□□□ -0.51
TSC1-207ENST00000493467 PCMTD1Q96MG8 357 aaPredicted RBP11.88□□□□□ -0.51
TSC1-207ENST00000493467 ERC2O15083 957 aa11.88□□□□□ -0.51
TSC1-207ENST00000493467 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
TSC1-207ENST00000493467 GAS2L3Q86XJ1 694 aa11.88□□□□□ -0.51
TSC1-207ENST00000493467 PDE1AP54750 535 aa11.87□□□□□ -0.51
TSC1-207ENST00000493467 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
TSC1-207ENST00000493467 GNAI2P04899 355 aa11.87□□□□□ -0.51
TSC1-207ENST00000493467 G2E3Q7L622 706 aa11.87□□□□□ -0.51
TSC1-207ENST00000493467 HMGB1P09429 215 aaKnown RBP11.86□□□□□ -0.51
TSC1-207ENST00000493467 NLRP6P59044 892 aa11.86□□□□□ -0.51
TSC1-207ENST00000493467 MAP2K5Q13163 448 aa11.86□□□□□ -0.51
TSC1-207ENST00000493467 TBX22Q9Y458 520 aa11.86□□□□□ -0.51
TSC1-207ENST00000493467 MED1Q15648 1581 aaPredicted RBP11.86□□□□□ -0.51
TSC1-207ENST00000493467 FOXO3O43524 673 aa11.86□□□□□ -0.51
TSC1-207ENST00000493467 IL17RAQ96F46 866 aa11.86□□□□□ -0.51
TSC1-207ENST00000493467 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
TSC1-207ENST00000493467 GNAI3P08754 354 aa11.85□□□□□ -0.51
TSC1-207ENST00000493467 ZNF445P59923 1031 aa11.85□□□□□ -0.51
TSC1-207ENST00000493467 TTLL12Q14166 644 aaPredicted RBP11.85□□□□□ -0.51
TSC1-207ENST00000493467 EYA1Q99502 592 aa11.85□□□□□ -0.51
TSC1-207ENST00000493467 AOX1Q06278 1338 aa11.85□□□□□ -0.51
TSC1-207ENST00000493467 AK9Q5TCS8 1911 aa11.85□□□□□ -0.51
TSC1-207ENST00000493467 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
TSC1-207ENST00000493467 F6X3S4 739 aa11.84□□□□□ -0.51
TSC1-207ENST00000493467 FECHP22830 423 aa11.84□□□□□ -0.51
TSC1-207ENST00000493467 CCDC173Q0VFZ6 552 aa11.84□□□□□ -0.51
TSC1-207ENST00000493467 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
TSC1-207ENST00000493467 PPP1R9BQ96SB3 815 aa11.84□□□□□ -0.51
TSC1-207ENST00000493467 LMBRD1Q9NUN5 540 aa11.84□□□□□ -0.51
TSC1-207ENST00000493467 AMOTL2Q9Y2J4 779 aa11.84□□□□□ -0.51
TSC1-207ENST00000493467 EID1Q9Y6B2 187 aa11.84□□□□□ -0.51
TSC1-207ENST00000493467 MAP3K5Q99683 1374 aa11.84□□□□□ -0.51
TSC1-207ENST00000493467 ESPNB1AK53 854 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 EPB41L2O43491 1005 aaKnown RBP11.83□□□□□ -0.52
TSC1-207ENST00000493467 MCM2P49736 904 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 MIS18AQ9NYP9 233 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 STAP2Q9UGK3 403 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 KDM3BQ7LBC6 1761 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 AMPHP49418 695 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 ANAPC15P60006 121 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 ATP8B2P98198 1209 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 SLC4A10Q6U841 1118 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 ESYT1Q9BSJ8 1104 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 LRRCC1Q9C099 1032 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 SRCIN1Q9C0H9 1055 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 CRYBG1Q9Y4K1 1723 aa11.83□□□□□ -0.52
TSC1-207ENST00000493467 GNAT3A8MTJ3 354 aa11.82□□□□□ -0.52
TSC1-207ENST00000493467 DPYSL4O14531 572 aa11.82□□□□□ -0.52
TSC1-207ENST00000493467 PHRF1Q9P1Y6 1649 aaKnown RBP11.82□□□□□ -0.52
TSC1-207ENST00000493467 FER1L4A9Z1Z3 1794 aa11.82□□□□□ -0.52
TSC1-207ENST00000493467 MX1P20591 662 aa11.82□□□□□ -0.52
TSC1-207ENST00000493467 MCTP1Q6DN14 999 aa11.82□□□□□ -0.52
TSC1-207ENST00000493467 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
TSC1-207ENST00000493467 LTN1O94822 1766 aa11.81□□□□□ -0.52
TSC1-207ENST00000493467 HOXC9P31274 260 aa11.81□□□□□ -0.52
TSC1-207ENST00000493467 CUL4AQ13619 759 aa11.81□□□□□ -0.52
TSC1-207ENST00000493467 TRIM44Q96DX7 344 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms