RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 RTCBQ9Y3I0 505 aaKnown RBP20.71■□□□□ 0.91
HDAC7-224ENST00000488927 ADRA2BP18089 450 aa20.7■□□□□ 0.9
HDAC7-224ENST00000488927 HNRNPUQ00839 825 aaKnown RBP eCLIP20.7■□□□□ 0.9
HDAC7-224ENST00000488927 CHMP4AQ9BY43 222 aa20.7■□□□□ 0.9
HDAC7-224ENST00000488927 SOS1Q07889 1333 aaPredicted RBP20.7■□□□□ 0.9
HDAC7-224ENST00000488927 RPS6KA4O75676 772 aa20.69■□□□□ 0.9
HDAC7-224ENST00000488927 INTS5Q6P9B9 1019 aaKnown RBP20.69■□□□□ 0.9
HDAC7-224ENST00000488927 USP16Q9Y5T5 823 aa20.69■□□□□ 0.9
HDAC7-224ENST00000488927 E9PSI1 815 aa20.68■□□□□ 0.9
HDAC7-224ENST00000488927 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
HDAC7-224ENST00000488927 PSDA5PKW4 1024 aaPredicted RBP20.67■□□□□ 0.9
HDAC7-224ENST00000488927 TSR2Q969E8 191 aaKnown RBP20.67■□□□□ 0.9
HDAC7-224ENST00000488927 ERBB4Q15303 1308 aa20.67■□□□□ 0.9
HDAC7-224ENST00000488927 PNPLA7Q6ZV29 1317 aa20.67■□□□□ 0.9
HDAC7-224ENST00000488927 FANCIQ9NVI1 1328 aa20.67■□□□□ 0.9
HDAC7-224ENST00000488927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.66■□□□□ 0.9
HDAC7-224ENST00000488927 TRAPPC3LQ5T215 181 aa20.66■□□□□ 0.9
HDAC7-224ENST00000488927 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
HDAC7-224ENST00000488927 ZBTB1Q9Y2K1 713 aa20.66■□□□□ 0.9
HDAC7-224ENST00000488927 QSER1Q2KHR3 1735 aa20.66■□□□□ 0.9
HDAC7-224ENST00000488927 IL6STP40189 918 aaPredicted RBP20.65■□□□□ 0.9
HDAC7-224ENST00000488927 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
HDAC7-224ENST00000488927 SLC16A10Q8TF71 515 aa20.65■□□□□ 0.9
HDAC7-224ENST00000488927 LAMB4A4D0S4 1761 aa20.64■□□□□ 0.9
HDAC7-224ENST00000488927 A0A087WZG4 1122 aa20.64■□□□□ 0.89
HDAC7-224ENST00000488927 PHF14O94880 888 aa20.64■□□□□ 0.89
HDAC7-224ENST00000488927 CANXP27824 592 aaKnown RBP20.64■□□□□ 0.89
HDAC7-224ENST00000488927 ZBED9Q6R2W3 1325 aa20.63■□□□□ 0.89
HDAC7-224ENST00000488927 A1BGP04217 495 aa20.63■□□□□ 0.89
HDAC7-224ENST00000488927 KRT24Q2M2I5 525 aa20.63■□□□□ 0.89
HDAC7-224ENST00000488927 COL23A1Q86Y22 540 aaPredicted RBP20.63■□□□□ 0.89
HDAC7-224ENST00000488927 SPINK5Q9NQ38 1064 aaPredicted RBP20.63■□□□□ 0.89
HDAC7-224ENST00000488927 UBR3Q6ZT12 1888 aa20.62■□□□□ 0.89
HDAC7-224ENST00000488927 MSH5O43196 834 aa20.62■□□□□ 0.89
HDAC7-224ENST00000488927 EIF2S2P20042 333 aaKnown RBP20.62■□□□□ 0.89
HDAC7-224ENST00000488927 RFC4P35249 363 aa20.62■□□□□ 0.89
HDAC7-224ENST00000488927 EIF5P55010 431 aaKnown RBP20.62■□□□□ 0.89
HDAC7-224ENST00000488927 SLFN5Q08AF3 891 aa20.62■□□□□ 0.89
HDAC7-224ENST00000488927 HDGFL1Q5TGJ6 251 aa20.62■□□□□ 0.89
HDAC7-224ENST00000488927 COL15A1P39059 1388 aa20.61■□□□□ 0.89
HDAC7-224ENST00000488927 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
HDAC7-224ENST00000488927 C8orf58Q8NAV2 365 aa20.61■□□□□ 0.89
HDAC7-224ENST00000488927 ARHGEF1Q92888 912 aaKnown RBP20.61■□□□□ 0.89
HDAC7-224ENST00000488927 TWISTNBQ3B726 338 aaPredicted RBP20.6■□□□□ 0.89
HDAC7-224ENST00000488927 AMIGO3Q86WK7 504 aa20.6■□□□□ 0.89
HDAC7-224ENST00000488927 TUBGCP6Q96RT7 1819 aa20.6■□□□□ 0.89
HDAC7-224ENST00000488927 ELL2O00472 640 aaPredicted RBP20.59■□□□□ 0.89
HDAC7-224ENST00000488927 MTFR1LQ9H019 292 aa20.59■□□□□ 0.89
HDAC7-224ENST00000488927 NBPF26B4DH59 902 aa20.58■□□□□ 0.89
HDAC7-224ENST00000488927 ZPR1O75312 459 aa20.58■□□□□ 0.89
HDAC7-224ENST00000488927 EXOSC9Q06265 439 aaKnown RBP20.58■□□□□ 0.89
HDAC7-224ENST00000488927 CCDC30Q5VVM6 783 aa20.58■□□□□ 0.89
HDAC7-224ENST00000488927 NBPF10Q6P3W6 841 aaKnown RBP20.58■□□□□ 0.89
HDAC7-224ENST00000488927 NBPF15Q8N660 670 aa20.58■□□□□ 0.89
HDAC7-224ENST00000488927 DBF4Q9UBU7 674 aaPredicted RBP20.58■□□□□ 0.89
HDAC7-224ENST00000488927 ZNF330Q9Y3S2 320 aaPredicted RBP20.58■□□□□ 0.89
HDAC7-224ENST00000488927 CASZ1Q86V15 1759 aa20.58■□□□□ 0.89
HDAC7-224ENST00000488927 TRMT2AQ8IZ69 625 aaKnown RBP20.57■□□□□ 0.88
HDAC7-224ENST00000488927 TSPYL6Q8N831 410 aa20.57■□□□□ 0.88
HDAC7-224ENST00000488927 CDCA7LQ96GN5 454 aa20.57■□□□□ 0.88
HDAC7-224ENST00000488927 PDGFDQ9GZP0 370 aaPredicted RBP20.57■□□□□ 0.88
HDAC7-224ENST00000488927 DDX21Q9NR30 783 aaKnown RBP eCLIP20.57■□□□□ 0.88
HDAC7-224ENST00000488927 NARFQ9UHQ1 456 aa20.57■□□□□ 0.88
HDAC7-224ENST00000488927 USP42Q9H9J4 1324 aaKnown RBP20.56■□□□□ 0.88
HDAC7-224ENST00000488927 MYL6BP14649 208 aa20.56■□□□□ 0.88
HDAC7-224ENST00000488927 SMIM5Q71RC9 77 aa20.56■□□□□ 0.88
HDAC7-224ENST00000488927 PIP4K2AP48426 406 aaPredicted RBP20.55■□□□□ 0.88
HDAC7-224ENST00000488927 PDIA6Q15084 440 aa20.55■□□□□ 0.88
HDAC7-224ENST00000488927 NECTIN2Q92692 538 aa20.55■□□□□ 0.88
HDAC7-224ENST00000488927 STK31Q9BXU1 1019 aa20.55■□□□□ 0.88
HDAC7-224ENST00000488927 SPON1Q9HCB6 807 aa20.55■□□□□ 0.88
HDAC7-224ENST00000488927 HYPKQ9NX55 129 aa20.55■□□□□ 0.88
HDAC7-224ENST00000488927 RGL2O15211 777 aa20.54■□□□□ 0.88
HDAC7-224ENST00000488927 VAMP4O75379 141 aa20.54■□□□□ 0.88
HDAC7-224ENST00000488927 ZBTB7AO95365 584 aa20.54■□□□□ 0.88
HDAC7-224ENST00000488927 DZIP3Q86Y13 1208 aaKnown RBP20.54■□□□□ 0.88
HDAC7-224ENST00000488927 NLGN1Q8N2Q7 840 aa20.54■□□□□ 0.88
HDAC7-224ENST00000488927 CHPF2Q9P2E5 772 aa20.54■□□□□ 0.88
HDAC7-224ENST00000488927 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
HDAC7-224ENST00000488927 KIF6Q6ZMV9 814 aa20.53■□□□□ 0.88
HDAC7-224ENST00000488927 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
HDAC7-224ENST00000488927 ARXQ96QS3 562 aa20.53■□□□□ 0.88
HDAC7-224ENST00000488927 GYS1P13807 737 aa20.52■□□□□ 0.88
HDAC7-224ENST00000488927 USPL1Q5W0Q7 1092 aa20.52■□□□□ 0.88
HDAC7-224ENST00000488927 TBC1D2BQ9UPU7 963 aa20.52■□□□□ 0.88
HDAC7-224ENST00000488927 C4AP0C0L4 1744 aa20.51■□□□□ 0.87
HDAC7-224ENST00000488927 POLD1P28340 1107 aa20.51■□□□□ 0.87
HDAC7-224ENST00000488927 PROSER3Q2NL68 480 aa20.51■□□□□ 0.87
HDAC7-224ENST00000488927 CLEC4GQ6UXB4 293 aa20.51■□□□□ 0.87
HDAC7-224ENST00000488927 LRP10Q7Z4F1 713 aa20.51■□□□□ 0.87
HDAC7-224ENST00000488927 SRP68Q9UHB9 627 aaKnown RBP20.51■□□□□ 0.87
HDAC7-224ENST00000488927 ZNF652Q9Y2D9 606 aa20.51■□□□□ 0.87
HDAC7-224ENST00000488927 ERVV-1B6SEH8 477 aa20.5■□□□□ 0.87
HDAC7-224ENST00000488927 CAMTA2O94983 1202 aa20.49■□□□□ 0.87
HDAC7-224ENST00000488927 ANXA1P04083 346 aa20.49■□□□□ 0.87
HDAC7-224ENST00000488927 ATF5Q9Y2D1 282 aaPredicted RBP20.49■□□□□ 0.87
HDAC7-224ENST00000488927 MAP3K15Q6ZN16 1313 aa20.49■□□□□ 0.87
HDAC7-224ENST00000488927 MSL1Q68DK7 614 aa20.48■□□□□ 0.87
HDAC7-224ENST00000488927 COPS6Q7L5N1 327 aa20.48■□□□□ 0.87
HDAC7-224ENST00000488927 XAGE3Q8WTP9 111 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms